Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072353
CDS Infomation

pacid=37477735 polypeptide=PGSC0003DMP400048916 locus=PGSC0003DMG400028158 ID=PGSC0003DMT400072353.v4.03 annot-version=v4.03
Sequence

ATGCCAAGGCAGAATCAGGCTATGGTGGAGGGTTTAATACCCAAGATCCGTAAAAGGGGT
TGTTCATCTTCTTCATCTGCATCATCAAAAGTGTATAACTACAGATTTAAACGGGCTATT
TTAGTTGGGAAATCAAGAAACGGGCTCGGGCTCGGGTTTGGGCTTAGAGGGTCTAGATCC
AATACACCAGTACCAAGTTGGAGAGCTACTCCATTGAGAAACGTTGTTGAGTCACCCAAA
CAGTCCCTTGGTGGTGGGATATCACAGCCAGTTTCAGCTAGAAAACTTGCTGCTACATTG
TGGGAAATGAATGAAATGCCTTCACCAAGAATGACTGAGGAAGACTTGGAGAAAAAGAAG
AAGATGATGATGAAGAAGGAGAAAATTCGGGCTGGTCATATGAGTTCGGGCTCTGTTTCG
GGCTCTTTGCCTCCTCATTTGTGTGATCCATCTCATAGCCCGGTTTCTGAGAGGATGGAT
CGGTCTGGAACAGGAAGCTATCAGAAGAGATCATCAACAACTTCCCGTAGACCAAGGACT
ACGGACCATAATGTTGGAATGTTAGATTCTTTAAGCAGCGCCAGTTTTATGGAGCTTGAG
ACCAGATCTCGTGCCCAGACTCCACGGGGATCAGTGACTGGTTTTGGCAGCCGTCTGAAG
GATGTTAGTAATGCTTTGACAACATCCAAAGAGCTTCTGAAAATAATCAATCGAATTTGG
GCACATGCTGATCAACCTTCATCTAGCACGTCACTTGTCTCTGTGTTACACACTGAGCTA
GAAAGGGCCCGCCTGCAGGTGAACCAGCTTATTCAAGACCAGCGCTCGGATCAAAATGAG
ATTAATTATCTCCTTAAATGCTTTGCTGAAGAGAAAGCAGCTTGGAAGAATAAAGGGCAA
CAGGCAGTTGAGGCTGCAATTGAGTCCGTTGCAAATGAACTTGAGGTAGAGAGAAAGCTT
AGGCGGAGATTTGAGAGCTTGAACAAAAAACTTGGCAAAGAGTTATCGGATTCAAAAGCA
TCATTCGTGAAGGTAGTGAAAGAGCTTGAAAGTGAGAAAAGAGCCAGAGAAGTAATGGAA
CAGGTATGTGATGAATTAGCTAGAGATATTGATGAAGACAAAGCTGAAGCAGAAGAGATG
AAGAGGGAATCTGCAAAAGTTCAAGAAGAGATTGAACAGGAAAGAGAGATGCTCCAGTTA
GCTGATAGATTGCGCGAGGAAAGGGCTCACGTGAAACTCTCAGAGGCCAAGAATCATTTC
GAGGAGAAAAATTCTGCTATTGACAAGCTAAGGAAGCAGCTTGAAGGATTCCTGGGGAAG
AAAAAGACCAAAGGTAAGAGAAACGGTTCCCTAAATTTCAGAAATAATGAAGATACGGCA
TCCTTGAGTATAGAAAAAGACAATGATGGAGAAGTGGAGAATGTTGCAGACTGCGGGGAA
GACTCAGCAGAAAGTGATCTTCATTCAATTGAACTAAACATGGACAATTCCAATAAGAGC
TACAATTGGGCTTATCCATCTAATGTAGTTCGTGAGTCAAAACGAATTTCAGTTGATGAA
AGAAGAGCAAGAAACTCCATCGCTGGGCAGCCCAGAAGAAGCACTCCCATTCAAAGGAGC
ATTTCTGGTGGAGTTGTCGAGTATGTCAATCAAGCTGCAAATCTTCCAACCTCAGGAGAT
GGATTAGACAGGGAAAGACTTCATGAACTCGAGAAACTAGGCCAACGATATAGTTATCTG
GATGAAGCACAGAGACTTAAAGCAGTGAAGGGCCTTAAGGATCATCTAATAGCTAGTTCC
GGGACAGGATCTTGCAAAGACATTTCCAGCCCCATCCGACAGTGGGAGCAACCTTGGCCT
TCTAGAGATCCCTGTGGTACAATTCAGGAAAAATCGAGCATTATTCAGGGGAGTGCCACA
AAATCAAGGCTAGGAGAAGGCCAAAGTGTCAGAAGATCAAGACGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400048916
PEP Infomation

pacid=37477735 transcript=PGSC0003DMT400072353 locus=PGSC0003DMG400028158 ID=PGSC0003DMT400072353.v4.03 annot-version=v4.03
Sequence

MPRQNQAMVEGLIPKIRKRGCSSSSSASSKVYNYRFKRAILVGKSRNGLGLGFGLRGSRS
NTPVPSWRATPLRNVVESPKQSLGGGISQPVSARKLAATLWEMNEMPSPRMTEEDLEKKK
KMMMKKEKIRAGHMSSGSVSGSLPPHLCDPSHSPVSERMDRSGTGSYQKRSSTTSRRPRT
TDHNVGMLDSLSSASFMELETRSRAQTPRGSVTGFGSRLKDVSNALTTSKELLKIINRIW
AHADQPSSSTSLVSVLHTELERARLQVNQLIQDQRSDQNEINYLLKCFAEEKAAWKNKGQ
QAVEAAIESVANELEVERKLRRRFESLNKKLGKELSDSKASFVKVVKELESEKRAREVME
QVCDELARDIDEDKAEAEEMKRESAKVQEEIEQEREMLQLADRLREERAHVKLSEAKNHF
EEKNSAIDKLRKQLEGFLGKKKTKGKRNGSLNFRNNEDTASLSIEKDNDGEVENVADCGE
DSAESDLHSIELNMDNSNKSYNWAYPSNVVRESKRISVDERRARNSIAGQPRRSTPIQRS
ISGGVVEYVNQAANLPTSGDGLDRERLHELEKLGQRYSYLDEAQRLKAVKGLKDHLIASS
GTGSCKDISSPIRQWEQPWPSRDPCGTIQEKSSIIQGSATKSRLGEGQSVRRSRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400072353
Transcript Infomation

pacid=37477735 locus=PGSC0003DMG400028158 ID=PGSC0003DMT400072353.v4.03 annot-version=v4.03
Sequence

ATGCCAAGGCAGAATCAGGCTATGGTGGAGGGTTTAATACCCAAGATCCGTAAAAGGGGT
TGTTCATCTTCTTCATCTGCATCATCAAAAGTGTATAACTACAGATTTAAACGGGCTATT
TTAGTTGGGAAATCAAGAAACGGGCTCGGGCTCGGGTTTGGGCTTAGAGGGTCTAGATCC
AATACACCAGTACCAAGTTGGAGAGCTACTCCATTGAGAAACGTTGTTGAGTCACCCAAA
CAGTCCCTTGGTGGTGGGATATCACAGCCAGTTTCAGCTAGAAAACTTGCTGCTACATTG
TGGGAAATGAATGAAATGCCTTCACCAAGAATGACTGAGGAAGACTTGGAGAAAAAGAAG
AAGATGATGATGAAGAAGGAGAAAATTCGGGCTGGTCATATGAGTTCGGGCTCTGTTTCG
GGCTCTTTGCCTCCTCATTTGTGTGATCCATCTCATAGCCCGGTTTCTGAGAGGATGGAT
CGGTCTGGAACAGGAAGCTATCAGAAGAGATCATCAACAACTTCCCGTAGACCAAGGACT
ACGGACCATAATGTTGGAATGTTAGATTCTTTAAGCAGCGCCAGTTTTATGGAGCTTGAG
ACCAGATCTCGTGCCCAGACTCCACGGGGATCAGTGACTGGTTTTGGCAGCCGTCTGAAG
GATGTTAGTAATGCTTTGACAACATCCAAAGAGCTTCTGAAAATAATCAATCGAATTTGG
GCACATGCTGATCAACCTTCATCTAGCACGTCACTTGTCTCTGTGTTACACACTGAGCTA
GAAAGGGCCCGCCTGCAGGTGAACCAGCTTATTCAAGACCAGCGCTCGGATCAAAATGAG
ATTAATTATCTCCTTAAATGCTTTGCTGAAGAGAAAGCAGCTTGGAAGAATAAAGGGCAA
CAGGCAGTTGAGGCTGCAATTGAGTCCGTTGCAAATGAACTTGAGGTAGAGAGAAAGCTT
AGGCGGAGATTTGAGAGCTTGAACAAAAAACTTGGCAAAGAGTTATCGGATTCAAAAGCA
TCATTCGTGAAGGTAGTGAAAGAGCTTGAAAGTGAGAAAAGAGCCAGAGAAGTAATGGAA
CAGGTATGTGATGAATTAGCTAGAGATATTGATGAAGACAAAGCTGAAGCAGAAGAGATG
AAGAGGGAATCTGCAAAAGTTCAAGAAGAGATTGAACAGGAAAGAGAGATGCTCCAGTTA
GCTGATAGATTGCGCGAGGAAAGGGCTCACGTGAAACTCTCAGAGGCCAAGAATCATTTC
GAGGAGAAAAATTCTGCTATTGACAAGCTAAGGAAGCAGCTTGAAGGATTCCTGGGGAAG
AAAAAGACCAAAGGTAAGAGAAACGGTTCCCTAAATTTCAGAAATAATGAAGATACGGCA
TCCTTGAGTATAGAAAAAGACAATGATGGAGAAGTGGAGAATGTTGCAGACTGCGGGGAA
GACTCAGCAGAAAGTGATCTTCATTCAATTGAACTAAACATGGACAATTCCAATAAGAGC
TACAATTGGGCTTATCCATCTAATGTAGTTCGTGAGTCAAAACGAATTTCAGTTGATGAA
AGAAGAGCAAGAAACTCCATCGCTGGGCAGCCCAGAAGAAGCACTCCCATTCAAAGGAGC
ATTTCTGGTGGAGTTGTCGAGTATGTCAATCAAGCTGCAAATCTTCCAACCTCAGGAGAT
GGATTAGACAGGGAAAGACTTCATGAACTCGAGAAACTAGGCCAACGATATAGTTATCTG
GATGAAGCACAGAGACTTAAAGCAGTGAAGGGCCTTAAGGATCATCTAATAGCTAGTTCC
GGGACAGGATCTTGCAAAGACATTTCCAGCCCCATCCGACAGTGGGAGCAACCTTGGCCT
TCTAGAGATCCCTGTGGTACAATTCAGGAAAAATCGAGCATTATTCAGGGGAGTGCCACA
AAATCAAGGCTAGGAGAAGGCCAAAGTGTCAGAAGATCAAGACGGTGA