Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072341
CDS Infomation

pacid=37479212 polypeptide=PGSC0003DMP400048905 locus=PGSC0003DMG400028150 ID=PGSC0003DMT400072341.v4.03 annot-version=v4.03
Sequence

ATGACAAATTCTTCAGGTGATGATAAAAAAGATGAAACGAAACCTGTTTTAGGTTATCCT
GAACAATTTTCTCAATCAAATCGTAATTTTGCCTCGCCTTATCCCAATCCTACCTATCAC
TATCCTCCACCATATGATCAATATCCATATCAATACCCCTATTACTACTACCCAAATTAC
CAATCCAATTATTATAACGATGACAACAACAACAACAATAATAATATCTTGCAACCCCAA
TTATCTAACGTACCCCCTCCACGACGAAAAATTATGACTTTTTGTCGTGTCCTTTTTTGC
CTTATAGTCGTTCTAATATTGAGTTTCACTATTTTTTTCGTAGTTCGAATTTGGAAAAAT
TACGCATATTACCCTTCATTTGAGGTTGTATCATTTATTGTACATTCTTTCAACATATCA
AATCCCACCAATAAGTTAACAGTGGATTGGGAAGTAGATGTGAGTGTGAGGAATTCAAAT
AGGAAAGTGGAAATTAGTTTTGACTACATATCAACTAGCTTGATGTACAATCTACAACTG
CTCGAATCATCGTTCAGCGCGCCTTTCAATGTGTCTAGAAAAAGTAACGCTAAGTTTCAT
GTCGATTCTAATATTCCAAATCCAAATCAGGTGAAAATAGGAGGACTTGTGGTTAATGAA
ATGGCTCGAGATTTGAGAAGAGGTTACAACTTGTTAATTGATTTGAGAATAGAAGCTAAA
ATAATAAATCAAGGTACCAACAGTCGCTACAAAAGAGAGTTGTATCTATCATGTGATGAT
TTAATTTTGAATTTCAAGAATTCAACTAGCTTGCCAGAGTGGGATGGTAGAACAAATAAT
TACAAATCAAAATGCGAGTACGATGAGACATGGTGGGATGTCATATGGGAACCTTGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400048905
PEP Infomation

pacid=37479212 transcript=PGSC0003DMT400072341 locus=PGSC0003DMG400028150 ID=PGSC0003DMT400072341.v4.03 annot-version=v4.03
Sequence

MTNSSGDDKKDETKPVLGYPEQFSQSNRNFASPYPNPTYHYPPPYDQYPYQYPYYYYPNY
QSNYYNDDNNNNNNNILQPQLSNVPPPRRKIMTFCRVLFCLIVVLILSFTIFFVVRIWKN
YAYYPSFEVVSFIVHSFNISNPTNKLTVDWEVDVSVRNSNRKVEISFDYISTSLMYNLQL
LESSFSAPFNVSRKSNAKFHVDSNIPNPNQVKIGGLVVNEMARDLRRGYNLLIDLRIEAK
IINQGTNSRYKRELYLSCDDLILNFKNSTSLPEWDGRTNNYKSKCEYDETWWDVIWEPW*

Transcript Sequence

Transcript ID

PGSC0003DMT400072341
Transcript Infomation

pacid=37479212 locus=PGSC0003DMG400028150 ID=PGSC0003DMT400072341.v4.03 annot-version=v4.03
Sequence

ATGACAAATTCTTCAGGTGATGATAAAAAAGATGAAACGAAACCTGTTTTAGGTTATCCT
GAACAATTTTCTCAATCAAATCGTAATTTTGCCTCGCCTTATCCCAATCCTACCTATCAC
TATCCTCCACCATATGATCAATATCCATATCAATACCCCTATTACTACTACCCAAATTAC
CAATCCAATTATTATAACGATGACAACAACAACAACAATAATAATATCTTGCAACCCCAA
TTATCTAACGTACCCCCTCCACGACGAAAAATTATGACTTTTTGTCGTGTCCTTTTTTGC
CTTATAGTCGTTCTAATATTGAGTTTCACTATTTTTTTCGTAGTTCGAATTTGGAAAAAT
TACGCATATTACCCTTCATTTGAGGTTGTATCATTTATTGTACATTCTTTCAACATATCA
AATCCCACCAATAAGTTAACAGTGGATTGGGAAGTAGATGTGAGTGTGAGGAATTCAAAT
AGGAAAGTGGAAATTAGTTTTGACTACATATCAACTAGCTTGATGTACAATCTACAACTG
CTCGAATCATCGTTCAGCGCGCCTTTCAATGTGTCTAGAAAAAGTAACGCTAAGTTTCAT
GTCGATTCTAATATTCCAAATCCAAATCAGGTGAAAATAGGAGGACTTGTGGTTAATGAA
ATGGCTCGAGATTTGAGAAGAGGTTACAACTTGTTAATTGATTTGAGAATAGAAGCTAAA
ATAATAAATCAAGGTACCAACAGTCGCTACAAAAGAGAGTTGTATCTATCATGTGATGAT
TTAATTTTGAATTTCAAGAATTCAACTAGCTTGCCAGAGTGGGATGGTAGAACAAATAAT
TACAAATCAAAATGCGAGTACGATGAGACATGGTGGGATGTCATATGGGAACCTTGGTGA