Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072333
CDS Infomation

pacid=37477261 polypeptide=PGSC0003DMP400048904 locus=PGSC0003DMG400028149 ID=PGSC0003DMT400072333.v4.03 annot-version=v4.03
Sequence

ATGGCGGCTTACGCAGTGGTAATGGAGAATTTGAAAGAGAGATCAGAATTTATGAACGAA
TCGATGCAGAAAAGCCAAACAATTACTGATAATATGATCTCCATTCTCGGTTCCTTCGAT
CATCGCCTCTCCGCTCTCGAAACCGCAATGCGTCCTACTCAGATAAGGACGCATTCGATT
AGAAAAGCACATGAGAATATTGACAAGACATTGAAAGTAGCTGAATCGATATTAGGTCAA
TTCGATCTCGCACGCCAGACGGAGGCCAAAATATTACGAGGGCCACATGAAGATTTGGAA
AGTTATCTGGAAGCAGTTAATCAGCTAAGGAGTATTGTTAAATTTTTCAGCAGTACGAAA
GGCCTTAAGAGTAGTATTGGTATGATTAATCATATTTCCAGTTTACTCGCAAAGTCTGTT
CTTAAGCTTGAAGAAGAGTTTCGTCAGCTTCTAAACTTGTACAGTAAACCTGTGGAACCT
GATTGTCTTTTCGATTGCCTCCCCCAATCTTTGAGACCGTCTACAGGATCAGATAGTAAA
GGTGATGGTGCTGGAGCAAAAGAGCACCAAAGAAGTTTAGAAACAGTTGTTTACCACCCT
CCAGATCTCATCCCACCTAGAATACTTCCCTTGTTACATGATTTGGCTCAGCAAATGATT
CAGGCCGGTCATCAACAGCAACTGTATACTATTTATAATGAAATACGCTCGTTAGTCATG
GAGCAGAGTCTTAAAAAACTAGGTGTGGAAAGACTTGGTAAAGAGGATGTACAGAAAATG
CAGTGGGAAGTTTTAGAGGCAAAAATTGGAAACTGGATTCACTACATGAGGATATCCGTA
AGGCTTTTATTTGCTGCAGAGAAGAAAGTCTCTGATCAAATTTTTGAAGGTCAAGATAGT
CTTAGAGATCAATGTTTTGCGGAGGTTACTGGAAATAGTGTCGCGGTGTTGCTTAGCTTT
GGAGAAGCCATTGCTAAAAGCAAACGATCGCCTGAAAAGCTATTTGTCCTTCTAGATATG
TATGAGATAATGAGAGAACTTCAGTCAGAGATGGATAATATTTTTGGAAGCCAATATTGC
AGTGAAATGCGAGAAGCTGCTAAAGTATTGACTAATCGTCTTGCTGAGACAGCGCAAGAG
ACCTTTGTGGATTTTGAAGAAGCAGTAGAAAAAGATGCCACCAAGACTGCTGTTCTTGAT
GGAACTGTCCATCCTTTAACTAGTTATGTGATTAATTATGTTAAGTTTTTATTTGACTAT
CAATCAACTCTAAAGCAACTTTTCGGAGACGCTGATGATGGTAATTCCAAAGACCAGTTG
GGAGTTATAACCACACGGATATTGCAAGCTCTTCAGAGTAACTTGGATGGGAAATCTAAG
CAATTCAAAGATCCTGCATTGACTCAACTATTTCTGATGAATAACATTCACTATATTGTA
AGATCTGTTCGCAGGTCTGAAGCAAAGGACGTGCTTGGTGATGATTGGGTTCAAATTCAT
AGAAGGGTAGTCCAGCAGCATGCAAATCAGTACAAGAGGATCTCTTGGTCTAAGATTCTG
CAGACTCTGTCCGTCCAAGGAGCTTCACCAGGTGGGAATTCTTCATTTACTGGTGAAGTT
GTGAGTAACAACACTGGTATCTCAAGGTCCACGGTGAAAGATAGGTTTAAGACGTTCAAC
ATGTTATTTGAGGAAATTCATCAGAGGCAATCTCAATGGACAGTTCCTGACAGTGAGTTG
CGCGAGTCTTTAAGGCTAGCAGTTGCTGAAGTCCTATTGCCTGCCTACAGGTCTTTTGCC
AAGCGTTTCGGGCCAATGATCGAGGGTGGCAAAAATCCGCAGAAGTATATCAGGTACACT
CCAGAAGATCTTGAACGAATGCTAGCTGAGTTTTTTGAAGGAAAAACCTGGAAAGGACCT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400048904
PEP Infomation

pacid=37477261 transcript=PGSC0003DMT400072333 locus=PGSC0003DMG400028149 ID=PGSC0003DMT400072333.v4.03 annot-version=v4.03
Sequence

MAAYAVVMENLKERSEFMNESMQKSQTITDNMISILGSFDHRLSALETAMRPTQIRTHSI
RKAHENIDKTLKVAESILGQFDLARQTEAKILRGPHEDLESYLEAVNQLRSIVKFFSSTK
GLKSSIGMINHISSLLAKSVLKLEEEFRQLLNLYSKPVEPDCLFDCLPQSLRPSTGSDSK
GDGAGAKEHQRSLETVVYHPPDLIPPRILPLLHDLAQQMIQAGHQQQLYTIYNEIRSLVM
EQSLKKLGVERLGKEDVQKMQWEVLEAKIGNWIHYMRISVRLLFAAEKKVSDQIFEGQDS
LRDQCFAEVTGNSVAVLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQSEMDNIFGSQYC
SEMREAAKVLTNRLAETAQETFVDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDY
QSTLKQLFGDADDGNSKDQLGVITTRILQALQSNLDGKSKQFKDPALTQLFLMNNIHYIV
RSVRRSEAKDVLGDDWVQIHRRVVQQHANQYKRISWSKILQTLSVQGASPGGNSSFTGEV
VSNNTGISRSTVKDRFKTFNMLFEEIHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFA
KRFGPMIEGGKNPQKYIRYTPEDLERMLAEFFEGKTWKGP*

Transcript Sequence

Transcript ID

PGSC0003DMT400072333
Transcript Infomation

pacid=37477261 locus=PGSC0003DMG400028149 ID=PGSC0003DMT400072333.v4.03 annot-version=v4.03
Sequence

ATGGCGGCTTACGCAGTGGTAATGGAGAATTTGAAAGAGAGATCAGAATTTATGAACGAA
TCGATGCAGAAAAGCCAAACAATTACTGATAATATGATCTCCATTCTCGGTTCCTTCGAT
CATCGCCTCTCCGCTCTCGAAACCGCAATGCGTCCTACTCAGATAAGGACGCATTCGATT
AGAAAAGCACATGAGAATATTGACAAGACATTGAAAGTAGCTGAATCGATATTAGGTCAA
TTCGATCTCGCACGCCAGACGGAGGCCAAAATATTACGAGGGCCACATGAAGATTTGGAA
AGTTATCTGGAAGCAGTTAATCAGCTAAGGAGTATTGTTAAATTTTTCAGCAGTACGAAA
GGCCTTAAGAGTAGTATTGGTATGATTAATCATATTTCCAGTTTACTCGCAAAGTCTGTT
CTTAAGCTTGAAGAAGAGTTTCGTCAGCTTCTAAACTTGTACAGTAAACCTGTGGAACCT
GATTGTCTTTTCGATTGCCTCCCCCAATCTTTGAGACCGTCTACAGGATCAGATAGTAAA
GGTGATGGTGCTGGAGCAAAAGAGCACCAAAGAAGTTTAGAAACAGTTGTTTACCACCCT
CCAGATCTCATCCCACCTAGAATACTTCCCTTGTTACATGATTTGGCTCAGCAAATGATT
CAGGCCGGTCATCAACAGCAACTGTATACTATTTATAATGAAATACGCTCGTTAGTCATG
GAGCAGAGTCTTAAAAAACTAGGTGTGGAAAGACTTGGTAAAGAGGATGTACAGAAAATG
CAGTGGGAAGTTTTAGAGGCAAAAATTGGAAACTGGATTCACTACATGAGGATATCCGTA
AGGCTTTTATTTGCTGCAGAGAAGAAAGTCTCTGATCAAATTTTTGAAGGTCAAGATAGT
CTTAGAGATCAATGTTTTGCGGAGGTTACTGGAAATAGTGTCGCGGTGTTGCTTAGCTTT
GGAGAAGCCATTGCTAAAAGCAAACGATCGCCTGAAAAGCTATTTGTCCTTCTAGATATG
TATGAGATAATGAGAGAACTTCAGTCAGAGATGGATAATATTTTTGGAAGCCAATATTGC
AGTGAAATGCGAGAAGCTGCTAAAGTATTGACTAATCGTCTTGCTGAGACAGCGCAAGAG
ACCTTTGTGGATTTTGAAGAAGCAGTAGAAAAAGATGCCACCAAGACTGCTGTTCTTGAT
GGAACTGTCCATCCTTTAACTAGTTATGTGATTAATTATGTTAAGTTTTTATTTGACTAT
CAATCAACTCTAAAGCAACTTTTCGGAGACGCTGATGATGGTAATTCCAAAGACCAGTTG
GGAGTTATAACCACACGGATATTGCAAGCTCTTCAGAGTAACTTGGATGGGAAATCTAAG
CAATTCAAAGATCCTGCATTGACTCAACTATTTCTGATGAATAACATTCACTATATTGTA
AGATCTGTTCGCAGGTCTGAAGCAAAGGACGTGCTTGGTGATGATTGGGTTCAAATTCAT
AGAAGGGTAGTCCAGCAGCATGCAAATCAGTACAAGAGGATCTCTTGGTCTAAGATTCTG
CAGACTCTGTCCGTCCAAGGAGCTTCACCAGGTGGGAATTCTTCATTTACTGGTGAAGTT
GTGAGTAACAACACTGGTATCTCAAGGTCCACGGTGAAAGATAGGTTTAAGACGTTCAAC
ATGTTATTTGAGGAAATTCATCAGAGGCAATCTCAATGGACAGTTCCTGACAGTGAGTTG
CGCGAGTCTTTAAGGCTAGCAGTTGCTGAAGTCCTATTGCCTGCCTACAGGTCTTTTGCC
AAGCGTTTCGGGCCAATGATCGAGGGTGGCAAAAATCCGCAGAAGTATATCAGGTACACT
CCAGAAGATCTTGAACGAATGCTAGCTGAGTTTTTTGAAGGAAAAACCTGGAAAGGACCT
TAA