Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072321
CDS Infomation

pacid=37477037 polypeptide=PGSC0003DMP400048895 locus=PGSC0003DMG400028143 ID=PGSC0003DMT400072321.v4.03 annot-version=v4.03
Sequence

ATGTACGGTGGGAACAACCAATTCGACGGCAACGCCGCGTTTTCCGGCGGAGGTTTCATG
CCGTCGCAGGCTACTCAAACCGCCGGTGATCATTCTTTCTCTCCGGCCAAGAATCGTGAT
TCACAGACTTTGATTCCATTAACCGTCAAGCAAATTAGTGAAGCCTTTCAATCAAGTGAT
GATAAGACAAATTTTCTCATTGATGGAGTTGATGTGAATAATGTAAAACTGGTGGGTATT
TTATGCAACAAAATGGAAAGAGTTACAGATGTATCATTTGTTGTGGATGATGGAACAGGG
CGCCTTGACTGTTTTCGATGGGTAAATGAAGCTGTTGATACCAAGGAAATGGAAGCAGTC
ACAAATGGCATGTATGTTCGAGTCCATGGACACTTGAAAGGCTTTCACGGTAAAAAGCAG
TTGATGGCTTACTCAGTCAGGCCTGTGGATGACTACAATGAGATTGCATACCACTTTGCT
CAAGTCATTTATGTTCATAGCTACAACAGTAGTCTACGGAAGCAACATGATAGTTCCTCT
ATGCCAGCTCAAGTGCCTAGCTCAGCTTTCAACACTCCTCTAAAGGGATACCAAGCTTCA
GCGTCAAATCAATTTCCTGGATACAGCATGGACGGGATCAGAGGTGTAGATAAAATGGTC
TTGGACTTCTTGCAACAACCATCGTGCCTTGCACTTGAAAAAGGGGTTCATCGCAATGAG
CTTGTCCAACAGCTACAACTCCCTTCAGAGAAGATCTCAGAAGCTCTTGACTCTCTCGAA
TCGGAAGGTCTAATTTACACCACAATAGATGAGTTTCACTACAAGTCTACTGGAAACGGT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400048895
PEP Infomation

pacid=37477037 transcript=PGSC0003DMT400072321 locus=PGSC0003DMG400028143 ID=PGSC0003DMT400072321.v4.03 annot-version=v4.03
Sequence

MYGGNNQFDGNAAFSGGGFMPSQATQTAGDHSFSPAKNRDSQTLIPLTVKQISEAFQSSD
DKTNFLIDGVDVNNVKLVGILCNKMERVTDVSFVVDDGTGRLDCFRWVNEAVDTKEMEAV
TNGMYVRVHGHLKGFHGKKQLMAYSVRPVDDYNEIAYHFAQVIYVHSYNSSLRKQHDSSS
MPAQVPSSAFNTPLKGYQASASNQFPGYSMDGIRGVDKMVLDFLQQPSCLALEKGVHRNE
LVQQLQLPSEKISEALDSLESEGLIYTTIDEFHYKSTGNG*

Transcript Sequence

Transcript ID

PGSC0003DMT400072321
Transcript Infomation

pacid=37477037 locus=PGSC0003DMG400028143 ID=PGSC0003DMT400072321.v4.03 annot-version=v4.03
Sequence

ATGTACGGTGGGAACAACCAATTCGACGGCAACGCCGCGTTTTCCGGCGGAGGTTTCATG
CCGTCGCAGGCTACTCAAACCGCCGGTGATCATTCTTTCTCTCCGGCCAAGAATCGTGAT
TCACAGACTTTGATTCCATTAACCGTCAAGCAAATTAGTGAAGCCTTTCAATCAAGTGAT
GATAAGACAAATTTTCTCATTGATGGAGTTGATGTGAATAATGTAAAACTGGTGGGTATT
TTATGCAACAAAATGGAAAGAGTTACAGATGTATCATTTGTTGTGGATGATGGAACAGGG
CGCCTTGACTGTTTTCGATGGGTAAATGAAGCTGTTGATACCAAGGAAATGGAAGCAGTC
ACAAATGGCATGTATGTTCGAGTCCATGGACACTTGAAAGGCTTTCACGGTAAAAAGCAG
TTGATGGCTTACTCAGTCAGGCCTGTGGATGACTACAATGAGATTGCATACCACTTTGCT
CAAGTCATTTATGTTCATAGCTACAACAGTAGTCTACGGAAGCAACATGATAGTTCCTCT
ATGCCAGCTCAAGTGCCTAGCTCAGCTTTCAACACTCCTCTAAAGGGATACCAAGCTTCA
GCGTCAAATCAATTTCCTGGATACAGCATGGACGGGATCAGAGGTGTAGATAAAATGGTC
TTGGACTTCTTGCAACAACCATCGTGCCTTGCACTTGAAAAAGGGGTTCATCGCAATGAG
CTTGTCCAACAGCTACAACTCCCTTCAGAGAAGATCTCAGAAGCTCTTGACTCTCTCGAA
TCGGAAGGTCTAATTTACACCACAATAGATGAGTTTCACTACAAGTCTACTGGAAACGGT
TGA