Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072306
CDS Infomation

pacid=37476500 polypeptide=PGSC0003DMP400048888 locus=PGSC0003DMG400028137 ID=PGSC0003DMT400072306.v4.03 annot-version=v4.03
Sequence

ATGGATTTTCAGATCTATGGCTTCACTAATCTATTCTTGTTCACCATTACACTCTTTTTC
ACCATTACAGGTGCCACATTTCAAGAAAACCCAAAATCCCCAATTTCAACAGTACCCCAA
ATCAATTCCAACTCCATTCTTGTAGCCCTTTTGGATTCTCACTATACTGAGTTATCTGAG
CTTGTTGAAAAAGCCCTTTTGCTTCAAACACTTGAAGAAGCTGTTTCTAAGCACAATATC
ACCATTTTTGCTCCTAAAAATGAAGCTCTGGAACGTGATTTAGACCCTGAATTCAAGCGT
TTCTTGCTTGAACCTGGAAATCTCAAATCTCTACAGAATCTCTTGTTGTTTCACATGATT
CCCACTCGCATTGTATCGAAAAATTGGCCGGCGCGTGGCCGTGTTCACTCCACTTTATAC
GCCGGAGAAGAAAATGTCCTTCAAATTTCCGAGAAGAAAACAGAGAAATCAGTCAGCTCA
GCTAAGATTATTAAACAAGACGATATTGTTAAACCCGACGGAATTATCCACGGGATTGAG
CGGGTTTTAATACCCAAATCAGTCCAGCAAGATTTCAACAACCGCCGTAGTCTCCGGTCA
ATCTCCGCCGTGATTCCGGAGGGAGCACCGGAAGTTGACCCGAGAACCCACCGGCTGAAG
AAGCCCGTAGCAGTACCAGCCGGCGCACCACCTGTGCTGCCGGTATACGATGCTTTGGCG
CCGGGGCCATCTCTGGCCCCAGCACCAGCTCCAGGACCCGGAGGACCCCACCATCACTTC
GATGGTGAGAGTCAAGTAAAAGATTTCATTCAAACACTCCTACATTATGGTGGTTACAAT
GAATTAGCAGACATTCTTGTGAATCTCACATCATTAGCTACAGAAATGGGGAAATTGGTT
TCTGAAGGGTATGTTTTAACTGTTCTGGCGCCCAATGACGAGGCTATGGCTAAGCTGACG
ACTGATCAGCTTAGCGAGCCTGGGGCGCCAGAACAGATAATGTATTACCATTTGATACCG
GAGTATCAAACGGAGGAAAGTATGTATAATTCAGTGAGGAGATTTGGTAAAATTAATTAT
GATACTTTAAGGTTGCCACATAAAGTTGTGGCTGAAGAAGCTGACGGTTCAGTGAAATTC
GGGCAAGGCGAAGGATCAGCTTATTTGGTTGATCCTGATATTTATACTGATGGAAGAATC
TCTGTGCAAGGGGTTGATGGTGTTTTGTTCCCTCTTGAGGAAATTAAGGCTACTCCTATA
GCTGCTCCTGTTGCTAAAGTTGTTGCAAAGCCAAGAAGAGGAAAGTTGATGGAAGTAGTA
TGTGGTACAATGGGGTCATTTGCTTTTGCTAGTTGTCATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048888
PEP Infomation

pacid=37476500 transcript=PGSC0003DMT400072306 locus=PGSC0003DMG400028137 ID=PGSC0003DMT400072306.v4.03 annot-version=v4.03
Sequence

MDFQIYGFTNLFLFTITLFFTITGATFQENPKSPISTVPQINSNSILVALLDSHYTELSE
LVEKALLLQTLEEAVSKHNITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQNLLLFHMI
PTRIVSKNWPARGRVHSTLYAGEENVLQISEKKTEKSVSSAKIIKQDDIVKPDGIIHGIE
RVLIPKSVQQDFNNRRSLRSISAVIPEGAPEVDPRTHRLKKPVAVPAGAPPVLPVYDALA
PGPSLAPAPAPGPGGPHHHFDGESQVKDFIQTLLHYGGYNELADILVNLTSLATEMGKLV
SEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNSVRRFGKINY
DTLRLPHKVVAEEADGSVKFGQGEGSAYLVDPDIYTDGRISVQGVDGVLFPLEEIKATPI
AAPVAKVVAKPRRGKLMEVVCGTMGSFAFASCH*

Transcript Sequence

Transcript ID

PGSC0003DMT400072306
Transcript Infomation

pacid=37476500 locus=PGSC0003DMG400028137 ID=PGSC0003DMT400072306.v4.03 annot-version=v4.03
Sequence

ATGGATTTTCAGATCTATGGCTTCACTAATCTATTCTTGTTCACCATTACACTCTTTTTC
ACCATTACAGGTGCCACATTTCAAGAAAACCCAAAATCCCCAATTTCAACAGTACCCCAA
ATCAATTCCAACTCCATTCTTGTAGCCCTTTTGGATTCTCACTATACTGAGTTATCTGAG
CTTGTTGAAAAAGCCCTTTTGCTTCAAACACTTGAAGAAGCTGTTTCTAAGCACAATATC
ACCATTTTTGCTCCTAAAAATGAAGCTCTGGAACGTGATTTAGACCCTGAATTCAAGCGT
TTCTTGCTTGAACCTGGAAATCTCAAATCTCTACAGAATCTCTTGTTGTTTCACATGATT
CCCACTCGCATTGTATCGAAAAATTGGCCGGCGCGTGGCCGTGTTCACTCCACTTTATAC
GCCGGAGAAGAAAATGTCCTTCAAATTTCCGAGAAGAAAACAGAGAAATCAGTCAGCTCA
GCTAAGATTATTAAACAAGACGATATTGTTAAACCCGACGGAATTATCCACGGGATTGAG
CGGGTTTTAATACCCAAATCAGTCCAGCAAGATTTCAACAACCGCCGTAGTCTCCGGTCA
ATCTCCGCCGTGATTCCGGAGGGAGCACCGGAAGTTGACCCGAGAACCCACCGGCTGAAG
AAGCCCGTAGCAGTACCAGCCGGCGCACCACCTGTGCTGCCGGTATACGATGCTTTGGCG
CCGGGGCCATCTCTGGCCCCAGCACCAGCTCCAGGACCCGGAGGACCCCACCATCACTTC
GATGGTGAGAGTCAAGTAAAAGATTTCATTCAAACACTCCTACATTATGGTGGTTACAAT
GAATTAGCAGACATTCTTGTGAATCTCACATCATTAGCTACAGAAATGGGGAAATTGGTT
TCTGAAGGGTATGTTTTAACTGTTCTGGCGCCCAATGACGAGGCTATGGCTAAGCTGACG
ACTGATCAGCTTAGCGAGCCTGGGGCGCCAGAACAGATAATGTATTACCATTTGATACCG
GAGTATCAAACGGAGGAAAGTATGTATAATTCAGTGAGGAGATTTGGTAAAATTAATTAT
GATACTTTAAGGTTGCCACATAAAGTTGTGGCTGAAGAAGCTGACGGTTCAGTGAAATTC
GGGCAAGGCGAAGGATCAGCTTATTTGGTTGATCCTGATATTTATACTGATGGAAGAATC
TCTGTGCAAGGGGTTGATGGTGTTTTGTTCCCTCTTGAGGAAATTAAGGCTACTCCTATA
GCTGCTCCTGTTGCTAAAGTTGTTGCAAAGCCAAGAAGAGGAAAGTTGATGGAAGTAGTA
TGTGGTACAATGGGGTCATTTGCTTTTGCTAGTTGTCATTAA