Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072290
CDS Infomation

pacid=37477004 polypeptide=PGSC0003DMP400048875 locus=PGSC0003DMG400028132 ID=PGSC0003DMT400072290.v4.03 annot-version=v4.03
Sequence

ATGCTGGCTTCCAAGAGCTTGTTATTCAAGCAGCAAAAACGAAAGAGAAAAAATGGTAAG
ATTAAGAAATCAAAGAGAATTTCTGTTTCTGCAAAAGAAGAAACGGTAGCGGAACCATAC
CAAATAGCACCAGAAGAAGAAGAAGAAGAAGAAGACGACGAAGGTTTCAGCTTGAAATCT
TCAGCACAATCAGATTCCTATGGAGTTCAGCCACTTGGGAATCTTTATTTCAACCCATCA
TCTCATAATTCAAGAAATACTGGTCTAGGTAATCTTCAGACTTTAACTGATGAGCTTGTT
CTTGATATTTTAGGTCTTTTGGAAGGTACCCATTTGGGTATTTTGTCAACTGTAAGCAAA
GGTTTCTATATTTTCTGTAATCATGAACCCCTTTGGAGGAATCTTGTATTGGAGACTTGT
AAAGGTGGGTTTTTGTTTAAGGGGTGTTGGAGGTCTACTTTTGTTGGTGCATATAGGCCT
TCATTTCCAGTTTTGAGTTTTGGTTTGAAAGTTAGAGACTTTTATTCTGATTACTTGTTT
CAGAGTTGGTTATGTGCTAATCTTGAAATGAAACCTGAATGGCTAGAGAGGGATAATATA
GTGAGGAGGAAAGGGATTTCTCTTGATGAGTTTGTGATGGATTTTGAAGAACCGAATAAG
CCGGTTTTGTTAGAAGGGTGTTTGGAGAATTGGCCTGGATTGGAGAAATGGAATAGGGAT
TATCTGATTGAGAAATGCGGGGATGTGAAATTTTCAGTAGGGCCGGTGGAAATGAAGCTT
GAAGACTACTTTAAGTACTCTGATCAAGTGAGGGAAGAAAGGCCCTTGTATTTGTTTGAC
CCAAAGTTTGCAGAGAAAATTCCTCAATTAGGAAAGGATTATGATGTCCCGATGTACTTC
AATGAGGATTTGTTTAGTGTTTTGGGTAATGAGAGGCCAGATTATAGGTGGATTATAATT
GGACCTGCAGGGTCTGGCTCGTCATTTCACATTGATCCAAATTCTACCTCTGCTTGGAAT
GCGGTAACCAAAGGATCCAAGAAATGGATATTATTTCCCCCGGATGTGGTGCCACCAGGA
GTTCATCCAAGCCCTGATGGTGCAGAAGTAGCAAGTCCTGTTTCTATTATAGAATGGTTC
ATGAACTTTTACAACGCAACCAAGAATTGGAAAAAGAGACCTATTGAATGTGTCTGCAAG
GCGGGTGAAGTTATCTTTGTACCTAATGGATGGTGGCATTTGGTCATCAATTTAGAGGAT
TCAATTGCCATTACCCAGAACTTTGTTAGCAGGAGGAATTTAGTGAATGTTTTGGAGTTT
CTAAAAAAGCCAAATGCTTGCACTCTTGTGTCTGGAACAAGCGACAGAGTCAATTTGCAC
GACAAATTTAAGAATGCCATTGAAGCACACCTTCCTGGTACTATTGATGAGTTGACTCTG
AAAGACGAGGAGAAAAAGGCGCAGCAGAACAAACCTTCCTTCTGGGAGTCGGTCACTGAT
TCAAATGCAGGCGTTTTCAGATTTTCTTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400048875
PEP Infomation

pacid=37477004 transcript=PGSC0003DMT400072290 locus=PGSC0003DMG400028132 ID=PGSC0003DMT400072290.v4.03 annot-version=v4.03
Sequence

MLASKSLLFKQQKRKRKNGKIKKSKRISVSAKEETVAEPYQIAPEEEEEEEDDEGFSLKS
SAQSDSYGVQPLGNLYFNPSSHNSRNTGLGNLQTLTDELVLDILGLLEGTHLGILSTVSK
GFYIFCNHEPLWRNLVLETCKGGFLFKGCWRSTFVGAYRPSFPVLSFGLKVRDFYSDYLF
QSWLCANLEMKPEWLERDNIVRRKGISLDEFVMDFEEPNKPVLLEGCLENWPGLEKWNRD
YLIEKCGDVKFSVGPVEMKLEDYFKYSDQVREERPLYLFDPKFAEKIPQLGKDYDVPMYF
NEDLFSVLGNERPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVTKGSKKWILFPPDVVPPG
VHPSPDGAEVASPVSIIEWFMNFYNATKNWKKRPIECVCKAGEVIFVPNGWWHLVINLED
SIAITQNFVSRRNLVNVLEFLKKPNACTLVSGTSDRVNLHDKFKNAIEAHLPGTIDELTL
KDEEKKAQQNKPSFWESVTDSNAGVFRFSF*

Transcript Sequence

Transcript ID

PGSC0003DMT400072290
Transcript Infomation

pacid=37477004 locus=PGSC0003DMG400028132 ID=PGSC0003DMT400072290.v4.03 annot-version=v4.03
Sequence

ATGCTGGCTTCCAAGAGCTTGTTATTCAAGCAGCAAAAACGAAAGAGAAAAAATGGTAAG
ATTAAGAAATCAAAGAGAATTTCTGTTTCTGCAAAAGAAGAAACGGTAGCGGAACCATAC
CAAATAGCACCAGAAGAAGAAGAAGAAGAAGAAGACGACGAAGGTTTCAGCTTGAAATCT
TCAGCACAATCAGATTCCTATGGAGTTCAGCCACTTGGGAATCTTTATTTCAACCCATCA
TCTCATAATTCAAGAAATACTGGTCTAGGTAATCTTCAGACTTTAACTGATGAGCTTGTT
CTTGATATTTTAGGTCTTTTGGAAGGTACCCATTTGGGTATTTTGTCAACTGTAAGCAAA
GGTTTCTATATTTTCTGTAATCATGAACCCCTTTGGAGGAATCTTGTATTGGAGACTTGT
AAAGGTGGGTTTTTGTTTAAGGGGTGTTGGAGGTCTACTTTTGTTGGTGCATATAGGCCT
TCATTTCCAGTTTTGAGTTTTGGTTTGAAAGTTAGAGACTTTTATTCTGATTACTTGTTT
CAGAGTTGGTTATGTGCTAATCTTGAAATGAAACCTGAATGGCTAGAGAGGGATAATATA
GTGAGGAGGAAAGGGATTTCTCTTGATGAGTTTGTGATGGATTTTGAAGAACCGAATAAG
CCGGTTTTGTTAGAAGGGTGTTTGGAGAATTGGCCTGGATTGGAGAAATGGAATAGGGAT
TATCTGATTGAGAAATGCGGGGATGTGAAATTTTCAGTAGGGCCGGTGGAAATGAAGCTT
GAAGACTACTTTAAGTACTCTGATCAAGTGAGGGAAGAAAGGCCCTTGTATTTGTTTGAC
CCAAAGTTTGCAGAGAAAATTCCTCAATTAGGAAAGGATTATGATGTCCCGATGTACTTC
AATGAGGATTTGTTTAGTGTTTTGGGTAATGAGAGGCCAGATTATAGGTGGATTATAATT
GGACCTGCAGGGTCTGGCTCGTCATTTCACATTGATCCAAATTCTACCTCTGCTTGGAAT
GCGGTAACCAAAGGATCCAAGAAATGGATATTATTTCCCCCGGATGTGGTGCCACCAGGA
GTTCATCCAAGCCCTGATGGTGCAGAAGTAGCAAGTCCTGTTTCTATTATAGAATGGTTC
ATGAACTTTTACAACGCAACCAAGAATTGGAAAAAGAGACCTATTGAATGTGTCTGCAAG
GCGGGTGAAGTTATCTTTGTACCTAATGGATGGTGGCATTTGGTCATCAATTTAGAGGAT
TCAATTGCCATTACCCAGAACTTTGTTAGCAGGAGGAATTTAGTGAATGTTTTGGAGTTT
CTAAAAAAGCCAAATGCTTGCACTCTTGTGTCTGGAACAAGCGACAGAGTCAATTTGCAC
GACAAATTTAAGAATGCCATTGAAGCACACCTTCCTGGTACTATTGATGAGTTGACTCTG
AAAGACGAGGAGAAAAAGGCGCAGCAGAACAAACCTTCCTTCTGGGAGTCGGTCACTGAT
TCAAATGCAGGCGTTTTCAGATTTTCTTTTTGA