Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072288
CDS Infomation

pacid=37477682 polypeptide=PGSC0003DMP400048874 locus=PGSC0003DMG400028131 ID=PGSC0003DMT400072288.v4.03 annot-version=v4.03
Sequence

ATGGATTCTCAAAATTCACCCCCGACGACCAGCCAGGTCAACTGTTGTTACTGCGGGTGC
AGCAGTTGTTCTGCAATGAACAGGTCCTATTCAGGGACTTGGCTCCGATCTGTGAAGCGA
AAGTTTGATGAATATAATGAGAATAAGTTTATAATCCCAGGCTTTGTCTTACCTCTAAAT
GCTCGTATTGAAATTGAAAATGAATGTACAGCACTTAGGGAAATGGTAAGTAAGCAACAA
CACACAATTCAGGATTTAGGTGCTGAGTTGGAGGAAGAACGAAATGCATCTTCCTCGGCG
GCGAATGAGGCCATGTCCATGATTTTGAGGTTGCAAGGAGAAAAGGCAGAGGTTCAGATG
GAATTTAAACAATTCAAGAGGTACACTGAGGAGAAAACGGCGCATGATCAGCAGGAGATT
ATGGCGTTGGAGGATATATTATACAAGAGGGAGCAAACAATTCAATCATTGACTTGTGAG
GTGCAAATGTATAAGCATAGAATGATGAGTTATGGGCTAACAGAATCTGAGGCTGAGGGT
GATTGTGAGACAGAAAAGGGCCGTTTTAGTCGGAACAATAGTATCTCCGAGACTATCAAT
GGGCAATTCGAAGTTCCTCCCTTCGATTACCCTCCATTGAAATGCACTATTAATGAGAAT
CAAGTATACACAGAATTTGATAATGACACTGTTGATGTTGAGAAATATGCATTTGAAGAG
ACCCCACGTTCATGTGACCAATTGCGCGATTTGGAGCATAGGATCAATCAATTGGAGAGG
ACGCCAAGAAGCACAGATGGGGATCTTTTCAAGAACAACATACTTGAAAAAGTGATAGTT
GGTCATTCCCCAAGGAGGAATAGACATCTTAGAAAATTTTCAACTGATAGTGTAGGATCT
CCCTTCATTACAAATAAAGAAATTAATTCAGATTTCATCTCAGATTCTCCAAGATTTGGT
GGAAGTATTAGAAAAGCAGAATATTCACAAACAGAAGAGCGTTCAAACTTGAGGAAGGTG
GATAATTCATCAGAAATTGGAGATGACATGAGTGACCGAGTTTACACAATTGATTCTGTA
CATCAGGGGGCTGGATATAATGGTGTGTCAGAACTCAAGGCTTCAGCTGGAATGGTTGAC
GACTATACCCCGAGGGATTCATTAAATAACACAGATTTTGGAGATCCAGAGGTCACAAAG
TTGTACTTTAGGCTCCAGGCACTTGAGGCTGACCGGGAATCAATGAGACAGGCTATGATT
GCTATGCGGACTGATAAAGCACAGGTGATATTGCTCAAGGAGATTGCTCAGCAGTTTTGC
AAAGAGATGTCTCCAGCCGTGAGAAAACCTGCGAAGAAGACATCTGTAATTGGGAGCTTT
TCATGCATGTCTGTATTCAAGTGGGTCACATGCTTTGTTTTATGGAGAAGAAAAGCACGC
AGATGCAAGTACCCATTTGGATCGTCGACCAACAATCCAGGCTTGCTAATGCTTTTAGAC
AAGGGACCTCACGTGGGGCAGTGGAGATGTCTGATGAGCACGCAGGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048874
PEP Infomation

pacid=37477682 transcript=PGSC0003DMT400072288 locus=PGSC0003DMG400028131 ID=PGSC0003DMT400072288.v4.03 annot-version=v4.03
Sequence

MDSQNSPPTTSQVNCCYCGCSSCSAMNRSYSGTWLRSVKRKFDEYNENKFIIPGFVLPLN
ARIEIENECTALREMVSKQQHTIQDLGAELEEERNASSSAANEAMSMILRLQGEKAEVQM
EFKQFKRYTEEKTAHDQQEIMALEDILYKREQTIQSLTCEVQMYKHRMMSYGLTESEAEG
DCETEKGRFSRNNSISETINGQFEVPPFDYPPLKCTINENQVYTEFDNDTVDVEKYAFEE
TPRSCDQLRDLEHRINQLERTPRSTDGDLFKNNILEKVIVGHSPRRNRHLRKFSTDSVGS
PFITNKEINSDFISDSPRFGGSIRKAEYSQTEERSNLRKVDNSSEIGDDMSDRVYTIDSV
HQGAGYNGVSELKASAGMVDDYTPRDSLNNTDFGDPEVTKLYFRLQALEADRESMRQAMI
AMRTDKAQVILLKEIAQQFCKEMSPAVRKPAKKTSVIGSFSCMSVFKWVTCFVLWRRKAR
RCKYPFGSSTNNPGLLMLLDKGPHVGQWRCLMSTQV*

Transcript Sequence

Transcript ID

PGSC0003DMT400072288
Transcript Infomation

pacid=37477682 locus=PGSC0003DMG400028131 ID=PGSC0003DMT400072288.v4.03 annot-version=v4.03
Sequence

ATGGATTCTCAAAATTCACCCCCGACGACCAGCCAGGTCAACTGTTGTTACTGCGGGTGC
AGCAGTTGTTCTGCAATGAACAGGTCCTATTCAGGGACTTGGCTCCGATCTGTGAAGCGA
AAGTTTGATGAATATAATGAGAATAAGTTTATAATCCCAGGCTTTGTCTTACCTCTAAAT
GCTCGTATTGAAATTGAAAATGAATGTACAGCACTTAGGGAAATGGTAAGTAAGCAACAA
CACACAATTCAGGATTTAGGTGCTGAGTTGGAGGAAGAACGAAATGCATCTTCCTCGGCG
GCGAATGAGGCCATGTCCATGATTTTGAGGTTGCAAGGAGAAAAGGCAGAGGTTCAGATG
GAATTTAAACAATTCAAGAGGTACACTGAGGAGAAAACGGCGCATGATCAGCAGGAGATT
ATGGCGTTGGAGGATATATTATACAAGAGGGAGCAAACAATTCAATCATTGACTTGTGAG
GTGCAAATGTATAAGCATAGAATGATGAGTTATGGGCTAACAGAATCTGAGGCTGAGGGT
GATTGTGAGACAGAAAAGGGCCGTTTTAGTCGGAACAATAGTATCTCCGAGACTATCAAT
GGGCAATTCGAAGTTCCTCCCTTCGATTACCCTCCATTGAAATGCACTATTAATGAGAAT
CAAGTATACACAGAATTTGATAATGACACTGTTGATGTTGAGAAATATGCATTTGAAGAG
ACCCCACGTTCATGTGACCAATTGCGCGATTTGGAGCATAGGATCAATCAATTGGAGAGG
ACGCCAAGAAGCACAGATGGGGATCTTTTCAAGAACAACATACTTGAAAAAGTGATAGTT
GGTCATTCCCCAAGGAGGAATAGACATCTTAGAAAATTTTCAACTGATAGTGTAGGATCT
CCCTTCATTACAAATAAAGAAATTAATTCAGATTTCATCTCAGATTCTCCAAGATTTGGT
GGAAGTATTAGAAAAGCAGAATATTCACAAACAGAAGAGCGTTCAAACTTGAGGAAGGTG
GATAATTCATCAGAAATTGGAGATGACATGAGTGACCGAGTTTACACAATTGATTCTGTA
CATCAGGGGGCTGGATATAATGGTGTGTCAGAACTCAAGGCTTCAGCTGGAATGGTTGAC
GACTATACCCCGAGGGATTCATTAAATAACACAGATTTTGGAGATCCAGAGGTCACAAAG
TTGTACTTTAGGCTCCAGGCACTTGAGGCTGACCGGGAATCAATGAGACAGGCTATGATT
GCTATGCGGACTGATAAAGCACAGGTGATATTGCTCAAGGAGATTGCTCAGCAGTTTTGC
AAAGAGATGTCTCCAGCCGTGAGAAAACCTGCGAAGAAGACATCTGTAATTGGGAGCTTT
TCATGCATGTCTGTATTCAAGTGGGTCACATGCTTTGTTTTATGGAGAAGAAAAGCACGC
AGATGCAAGTACCCATTTGGATCGTCGACCAACAATCCAGGCTTGCTAATGCTTTTAGAC
AAGGGACCTCACGTGGGGCAGTGGAGATGTCTGATGAGCACGCAGGTGTAA