Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072285
CDS Infomation

pacid=37477800 polypeptide=PGSC0003DMP400048871 locus=PGSC0003DMG400028129 ID=PGSC0003DMT400072285.v4.03 annot-version=v4.03
Sequence

ATGGAGACAGCGAAAGACACCGTACAGCACGACGCCGTTTTACCGGGAGGCGACGATGAT
ACTCCGGCGTTAAGCTCTCACGCTCTAGAAGCACTGAAAGAGTTCCTCGCCGAGCAGAGC
CGAGCAGTTGAGGAAGCTTCGTCAGCTGCGGCGGAGGATGACGTGGCGCTGGTATCGGAG
GATTGGCGGCTAAGCCAGTTCTGGTATAACCGCGAAACAGCTGAAACTGTCGCTAATGAA
GTCCTCAATCTCTGCCGGTCGATTGATTCGCCGGCGATTGCCTGCATTGCTTGCCCCACA
CTTTATGCTTATCTCAAGAAAATTGACCCTAATGCACCTGCACAAATTCTCGAGTATGAC
AAACGGTTTGAACAGTATGGAAGTGAGTTCACATTCTACGACTACAACCTACCAGAAGAT
CTTCCTTCTTCAATGAAACACTCATATCCAATAATTGTTGCAGATCCTCCTTACCTGAGT
CAGGAATGCTTAGAGAAAGTTGCTAAAACAATTTCTTTTCTCACGAAACCAGGACAAGCC
TACTTGCTTTTACTCACAGGTGAAGTGCAAAGTGGTAGGGCTTCCGAGCTCTTGGGTTTA
CGTCCATGTTCTTTTAGGCCAGATCACTCCAGCAAACTAGGCAATGAATTTCGACTGTTT
ACAAATTATGACCCAGGGACAAGGCTAGGTGGCTGGGAGCAGGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048871
PEP Infomation

pacid=37477800 transcript=PGSC0003DMT400072285 locus=PGSC0003DMG400028129 ID=PGSC0003DMT400072285.v4.03 annot-version=v4.03
Sequence

METAKDTVQHDAVLPGGDDDTPALSSHALEALKEFLAEQSRAVEEASSAAAEDDVALVSE
DWRLSQFWYNRETAETVANEVLNLCRSIDSPAIACIACPTLYAYLKKIDPNAPAQILEYD
KRFEQYGSEFTFYDYNLPEDLPSSMKHSYPIIVADPPYLSQECLEKVAKTISFLTKPGQA
YLLLLTGEVQSGRASELLGLRPCSFRPDHSSKLGNEFRLFTNYDPGTRLGGWEQV*

Transcript Sequence

Transcript ID

PGSC0003DMT400072285
Transcript Infomation

pacid=37477800 locus=PGSC0003DMG400028129 ID=PGSC0003DMT400072285.v4.03 annot-version=v4.03
Sequence

ATGGAGACAGCGAAAGACACCGTACAGCACGACGCCGTTTTACCGGGAGGCGACGATGAT
ACTCCGGCGTTAAGCTCTCACGCTCTAGAAGCACTGAAAGAGTTCCTCGCCGAGCAGAGC
CGAGCAGTTGAGGAAGCTTCGTCAGCTGCGGCGGAGGATGACGTGGCGCTGGTATCGGAG
GATTGGCGGCTAAGCCAGTTCTGGTATAACCGCGAAACAGCTGAAACTGTCGCTAATGAA
GTCCTCAATCTCTGCCGGTCGATTGATTCGCCGGCGATTGCCTGCATTGCTTGCCCCACA
CTTTATGCTTATCTCAAGAAAATTGACCCTAATGCACCTGCACAAATTCTCGAGTATGAC
AAACGGTTTGAACAGTATGGAAGTGAGTTCACATTCTACGACTACAACCTACCAGAAGAT
CTTCCTTCTTCAATGAAACACTCATATCCAATAATTGTTGCAGATCCTCCTTACCTGAGT
CAGGAATGCTTAGAGAAAGTTGCTAAAACAATTTCTTTTCTCACGAAACCAGGACAAGCC
TACTTGCTTTTACTCACAGGTGAAGTGCAAAGTGGTAGGGCTTCCGAGCTCTTGGGTTTA
CGTCCATGTTCTTTTAGGCCAGATCACTCCAGCAAACTAGGCAATGAATTTCGACTGTTT
ACAAATTATGACCCAGGGACAAGGCTAGGTGGCTGGGAGCAGGTGTAA