Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072279
CDS Infomation

pacid=37479148 polypeptide=PGSC0003DMP400048869 locus=PGSC0003DMG400028127 ID=PGSC0003DMT400072279.v4.03 annot-version=v4.03
Sequence

ATGGCATCTCACGTTGTTGGATATCCCCGTATGGGCCCAAAGAGAGAGCTGAAATTCGCT
CTCGAGTCTTTCTGGGATGGAAAGAGCAGTGCTGAGGATTTGAAGAAGGTCTCTGCAGAC
CTCAGGTCATCCATCTGGAAGCAGATGTCTGATGCTGGCATTAAGTACATCCCCAGCAAC
ACATTCTCTTACTATGATCAGGTGCTCGACACAACCACAATGCTTGGTGCTGTCCCATCT
AGGTACAACTGGACCGGTGGTGAGATTGAGTTCGGTACTTACTTCTCGATGGCCAGAGGA
AATGCCTCCGTCCCTGCTATGGAGATGACCAAGTGGTTTGACACCAACTACCACTTCATC
GTCCCTGAGTTGGGACCTGATGTTAACTTTTCTTATGCTTCCCACAAGGCAGTAAATGAG
TACAAAGAGGCCAAGGCGCAAGGAGTAGACACTGTTCCAGTTCTTGTTGGTCCAGTTTCA
TACTTGTTGCTATCCAAGCCTGCTAAGGGTGTTGACAAATCTTTCCCCCTTTTGTCACTT
TTGGATAAAATCCTTCCAATTTACAAGGAAGTTATCGCTGAGTTGAAGGCAGCTGGTGCT
TCTTGGATCCAGTTAGATGAGCCCACACTTGTGTTGGATCTAGAGTCTCACAAATTGGAA
GCATTCACCAAGGCCTATGCTGATCTCGAGTCATCTCTATCTGGCCTTAATGTTCTCGTT
GAGACCTACTTTGCTGATGTTCCTGCTGGGGCATTCAAAACCCTCACTGCCTTGAAGGGA
GTTACTGCCTTTGGCTTTGACTTGGTCCGTGGAACTCAGACCCTTGAGTTAATCAAGAGT
AGCTTCCCTTCAGGCAAGTACTTGTTTGCAGGAGTGGTTGACGGAAGGAACATCTGGGCA
AGTGATCTTGCTGCATCTCTTGCTCTCCTGCAATCTCTTGAGGGAGTTGTAGGAAAAGAC
AAGCTTGTTACCTCTACATCTTGCTCCCTGCTCCACACTGCTGTTGATCTGATCAACGAG
ACAAAACTAGATGATGAAATCAAATCATGGTTGGCATTTGCTGCCCAGAAGGTTGTTGAA
GTGAATGCTTTGGCCAAGGCATTGTCAGGTGCCAAGGATGAGGCATTTTTCTCTGCTAAT
GCTGCTGCTCAAGCTTCCAGGAAGTCTTCCCCAAGAGTGACAAATGAAGCTGTTCGAAAG
GCTTCTGCTGCTCTTCAAGGATCTGACCACCGCCGTGCTACAAATGTTAGTGCTAGACTC
GATGCCCAACAAAAGAAGCTTAACCTACCAATCCTGCCCACAACCACCATTGGATCCTTC
CCTCAGACAGTGGAGCTTAGGAGAGTTCGTCGGGAATACAAGGCCAAGAAGATCTCTGAG
GAGGAGTATGTTAAGGCCATCACCGAGGAAATCAAGAAGGTTGTTGATCTCCAGGAAGAA
CTTGACATTGATGTCTTGGTTCACGGAGAGCCTGAGAGGAACGATATGGTTGAGTACTTC
GGAGAGCAGCTCTCTGGTTTTGCTTTCACTGCCAATGGATGGGTTCAATCTTATGGATCT
CGATGTGTGAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCAAAGGCAATGACCGTC
TTCTGGTCCTCAAAAGCTCAAGAGATGACCAAGAGGCCAATGAAGGGAATGCTTACTGGC
CCTGTCACCATTCTCAACTGGTCTTTTGTCAGAAATGACCAACCTAGGTTTGAGACCTGC
TACCAGATTGCTTTGGCCATTAAGGATGAGGTGGAGGATTTGGAGAAGGCCGGCATCACT
GTCATCCAAATTGACGAAGCTGCATTGAGAGAGGGATTGCCTCTTAGGAAGGCTGAGCAC
ACTTCCTACTTGAACTGGGCTGTTCACTCTTTCAGAATCACCAACGTCGGTATCCAGGAC
ACCACACAGATCCACACTCACATGTGCTACTCCAACTTCAACGACATTATCCACTCCATC
ATCGACATGGATGCTGATGTGATCACCATTGAGAACTCACGTTCTGATGAGAAGCTCCTC
TCAGTTTTCAGGGAGGGAGTGAAATACGGAGCTGGCATTGGCCCTGGTGTCTACGACATC
CACTCTCCAAGAATACCATCAACCGAAGAGATTGCTGACAGAGTTAACAAGATGCTTGCA
GTTCTTGAGACCAACATCTTGTGGGTGAACCCCGACTGTGGTCTCAAGACTCGCAAGTAC
ACCGAGGTGAAGCCAGCCCTACAAAACATGGTGTCTGCAGCCAAGACCATCCGCACTCAG
CTCGCCAGCGCCAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400048869
PEP Infomation

pacid=37479148 transcript=PGSC0003DMT400072279 locus=PGSC0003DMG400028127 ID=PGSC0003DMT400072279.v4.03 annot-version=v4.03
Sequence

MASHVVGYPRMGPKRELKFALESFWDGKSSAEDLKKVSADLRSSIWKQMSDAGIKYIPSN
TFSYYDQVLDTTTMLGAVPSRYNWTGGEIEFGTYFSMARGNASVPAMEMTKWFDTNYHFI
VPELGPDVNFSYASHKAVNEYKEAKAQGVDTVPVLVGPVSYLLLSKPAKGVDKSFPLLSL
LDKILPIYKEVIAELKAAGASWIQLDEPTLVLDLESHKLEAFTKAYADLESSLSGLNVLV
ETYFADVPAGAFKTLTALKGVTAFGFDLVRGTQTLELIKSSFPSGKYLFAGVVDGRNIWA
SDLAASLALLQSLEGVVGKDKLVTSTSCSLLHTAVDLINETKLDDEIKSWLAFAAQKVVE
VNALAKALSGAKDEAFFSANAAAQASRKSSPRVTNEAVRKASAALQGSDHRRATNVSARL
DAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKISEEEYVKAITEEIKKVVDLQEE
LDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTV
FWSSKAQEMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGIT
VIQIDEAALREGLPLRKAEHTSYLNWAVHSFRITNVGIQDTTQIHTHMCYSNFNDIIHSI
IDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRVNKMLA
VLETNILWVNPDCGLKTRKYTEVKPALQNMVSAAKTIRTQLASAK*

Transcript Sequence

Transcript ID

PGSC0003DMT400072279
Transcript Infomation

pacid=37479148 locus=PGSC0003DMG400028127 ID=PGSC0003DMT400072279.v4.03 annot-version=v4.03
Sequence

ATGGCATCTCACGTTGTTGGATATCCCCGTATGGGCCCAAAGAGAGAGCTGAAATTCGCT
CTCGAGTCTTTCTGGGATGGAAAGAGCAGTGCTGAGGATTTGAAGAAGGTCTCTGCAGAC
CTCAGGTCATCCATCTGGAAGCAGATGTCTGATGCTGGCATTAAGTACATCCCCAGCAAC
ACATTCTCTTACTATGATCAGGTGCTCGACACAACCACAATGCTTGGTGCTGTCCCATCT
AGGTACAACTGGACCGGTGGTGAGATTGAGTTCGGTACTTACTTCTCGATGGCCAGAGGA
AATGCCTCCGTCCCTGCTATGGAGATGACCAAGTGGTTTGACACCAACTACCACTTCATC
GTCCCTGAGTTGGGACCTGATGTTAACTTTTCTTATGCTTCCCACAAGGCAGTAAATGAG
TACAAAGAGGCCAAGGCGCAAGGAGTAGACACTGTTCCAGTTCTTGTTGGTCCAGTTTCA
TACTTGTTGCTATCCAAGCCTGCTAAGGGTGTTGACAAATCTTTCCCCCTTTTGTCACTT
TTGGATAAAATCCTTCCAATTTACAAGGAAGTTATCGCTGAGTTGAAGGCAGCTGGTGCT
TCTTGGATCCAGTTAGATGAGCCCACACTTGTGTTGGATCTAGAGTCTCACAAATTGGAA
GCATTCACCAAGGCCTATGCTGATCTCGAGTCATCTCTATCTGGCCTTAATGTTCTCGTT
GAGACCTACTTTGCTGATGTTCCTGCTGGGGCATTCAAAACCCTCACTGCCTTGAAGGGA
GTTACTGCCTTTGGCTTTGACTTGGTCCGTGGAACTCAGACCCTTGAGTTAATCAAGAGT
AGCTTCCCTTCAGGCAAGTACTTGTTTGCAGGAGTGGTTGACGGAAGGAACATCTGGGCA
AGTGATCTTGCTGCATCTCTTGCTCTCCTGCAATCTCTTGAGGGAGTTGTAGGAAAAGAC
AAGCTTGTTACCTCTACATCTTGCTCCCTGCTCCACACTGCTGTTGATCTGATCAACGAG
ACAAAACTAGATGATGAAATCAAATCATGGTTGGCATTTGCTGCCCAGAAGGTTGTTGAA
GTGAATGCTTTGGCCAAGGCATTGTCAGGTGCCAAGGATGAGGCATTTTTCTCTGCTAAT
GCTGCTGCTCAAGCTTCCAGGAAGTCTTCCCCAAGAGTGACAAATGAAGCTGTTCGAAAG
GCTTCTGCTGCTCTTCAAGGATCTGACCACCGCCGTGCTACAAATGTTAGTGCTAGACTC
GATGCCCAACAAAAGAAGCTTAACCTACCAATCCTGCCCACAACCACCATTGGATCCTTC
CCTCAGACAGTGGAGCTTAGGAGAGTTCGTCGGGAATACAAGGCCAAGAAGATCTCTGAG
GAGGAGTATGTTAAGGCCATCACCGAGGAAATCAAGAAGGTTGTTGATCTCCAGGAAGAA
CTTGACATTGATGTCTTGGTTCACGGAGAGCCTGAGAGGAACGATATGGTTGAGTACTTC
GGAGAGCAGCTCTCTGGTTTTGCTTTCACTGCCAATGGATGGGTTCAATCTTATGGATCT
CGATGTGTGAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCAAAGGCAATGACCGTC
TTCTGGTCCTCAAAAGCTCAAGAGATGACCAAGAGGCCAATGAAGGGAATGCTTACTGGC
CCTGTCACCATTCTCAACTGGTCTTTTGTCAGAAATGACCAACCTAGGTTTGAGACCTGC
TACCAGATTGCTTTGGCCATTAAGGATGAGGTGGAGGATTTGGAGAAGGCCGGCATCACT
GTCATCCAAATTGACGAAGCTGCATTGAGAGAGGGATTGCCTCTTAGGAAGGCTGAGCAC
ACTTCCTACTTGAACTGGGCTGTTCACTCTTTCAGAATCACCAACGTCGGTATCCAGGAC
ACCACACAGATCCACACTCACATGTGCTACTCCAACTTCAACGACATTATCCACTCCATC
ATCGACATGGATGCTGATGTGATCACCATTGAGAACTCACGTTCTGATGAGAAGCTCCTC
TCAGTTTTCAGGGAGGGAGTGAAATACGGAGCTGGCATTGGCCCTGGTGTCTACGACATC
CACTCTCCAAGAATACCATCAACCGAAGAGATTGCTGACAGAGTTAACAAGATGCTTGCA
GTTCTTGAGACCAACATCTTGTGGGTGAACCCCGACTGTGGTCTCAAGACTCGCAAGTAC
ACCGAGGTGAAGCCAGCCCTACAAAACATGGTGTCTGCAGCCAAGACCATCCGCACTCAG
CTCGCCAGCGCCAAGTGA