Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072274
CDS Infomation

pacid=37480285 polypeptide=PGSC0003DMP400048868 locus=PGSC0003DMG400028126 ID=PGSC0003DMT400072274.v4.03 annot-version=v4.03
Sequence

ATGGATAGACTATTAACTCTAGAGCCATCTAACGTGGTTACAATACGACTTGAACCAGGT
CAGAAGTGTTCAGGTGAGTTAACCCTACGAAACGTCATGTACACCATGCCAGTTGCGTTT
CGTCTGCAGCCAGTAAACAAGACACGTTACACGATCCGTCCTCAATCGGGGATCATCTCT
CCTCTAACAACAATCACTTTGGAGATAATTTACCATCTCCCTCCAAACACAACTCTACCA
AACACTTTCCCTCACTCTGATGACTCATTCCTCTTGCATAGTGTTGTGGCCCCAGGAGCA
GCTATTAACAATAAGGCCACTTCTCCCACTTTATTAGATATGGTCCCAATTGATTGGTTC
ACTACAAAGAAAAAACAAGTTTTCATAGATAGTGCTATAAAAGTAATGTTTATTGGTTCA
CCTGTTTTGTGCTATCTTGTTAAAAAAGGCTATATGGATGAAATTAGAGAGGTTTTAGAA
AAAAGTGACTATAATTGCAAACCTGCTGACTCAGTTGACTTTGAAGGTCAAACATTACTA
CATTTGGCTATTTCACAAAGTAGGGCTGATTTAGTCCAATTGTTACTTGAATTTGGGCCT
AACATTGAGGCCCATAGTAGATCATGTTCAAGCCCATTAGAAGCAGCAGCAGCATTAGGA
GAGTCTTTAATTGTTGAACTTTTATTAGCAAAAAAGGCTAAAACTGAAAGAACAGAGTAC
TCTGCTTCAGGCCCAATACATCTTGCTGCTGGAAATGGCCATTTGGAAGTACTAAAACTA
CTCTTACTCAATGGAGCTAATGTGAATGCACTAACGAAAGACGGTAACACGGCCTTGCAT
ATCGCGGTGGAGGAAGGTAGACGAGATTGTGTTCGTGTTTTATTGGCTAATGGCGCGAGA
GCTGATGAGCGAAACGAGGGGAATTGTGATACACCTTTGCATATTGCTGCTGGATTAGGT
GATGAACATATGGTACGTGTTTTAATTCAAAAAGGTACAGAGAAAAATGTACGTAACAAG
TATGGGAAAACTGCTTATGATGTTGCTGCTGAACATGGACATAACAAGCTTTTCGATGCT
CTACGTTTAGGTGACAGCCTATGTGTAGCGGCTCGAAAAGGAGAGGTAAGAACCATCCAA
CGTCTCCTCGAAAACGGAGCCAGCATCAACGGACGTGACCAACATGGTTGGACCGCGTTG
CACCGGGCTAGTTTCAAAGGACGAATAGAAGTTGTAAAAGCATTAATAGAAAATGGAATT
GATATAAATGCAAAAGATGAAGATGGATATAGTGCATTACATTGTGCTGTTGAATCTGGA
CATGTTGATGTAGCTGAACTACTAGTTAAAAAAGGTGCAGACATTGATTCAAGGACTAGT
AAAGGTGTTACTCCATTACGTATCGCGGAATCGTTGAAATATTCGGGGTTGACTAGGGTA
ATCATGCAAGGTAACGGAGCGAAAGAACAAGTAGGGGCAAAATTGGAAATGAATTTCGCG
AAATCGTATGGTAAAATGGCTAAAGATGTCGAAATTATTGGGAGTGTGAAGAAAAGAAGT
CATGTTAATAAATCGTCAAGAGTTCGGAGGAGTAGCATTGATAGAACTGTTCCATTAGCC
TGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400048868
PEP Infomation

pacid=37480285 transcript=PGSC0003DMT400072274 locus=PGSC0003DMG400028126 ID=PGSC0003DMT400072274.v4.03 annot-version=v4.03
Sequence

MDRLLTLEPSNVVTIRLEPGQKCSGELTLRNVMYTMPVAFRLQPVNKTRYTIRPQSGIIS
PLTTITLEIIYHLPPNTTLPNTFPHSDDSFLLHSVVAPGAAINNKATSPTLLDMVPIDWF
TTKKKQVFIDSAIKVMFIGSPVLCYLVKKGYMDEIREVLEKSDYNCKPADSVDFEGQTLL
HLAISQSRADLVQLLLEFGPNIEAHSRSCSSPLEAAAALGESLIVELLLAKKAKTERTEY
SASGPIHLAAGNGHLEVLKLLLLNGANVNALTKDGNTALHIAVEEGRRDCVRVLLANGAR
ADERNEGNCDTPLHIAAGLGDEHMVRVLIQKGTEKNVRNKYGKTAYDVAAEHGHNKLFDA
LRLGDSLCVAARKGEVRTIQRLLENGASINGRDQHGWTALHRASFKGRIEVVKALIENGI
DINAKDEDGYSALHCAVESGHVDVAELLVKKGADIDSRTSKGVTPLRIAESLKYSGLTRV
IMQGNGAKEQVGAKLEMNFAKSYGKMAKDVEIIGSVKKRSHVNKSSRVRRSSIDRTVPLA
C*

Transcript Sequence

Transcript ID

PGSC0003DMT400072274
Transcript Infomation

pacid=37480285 locus=PGSC0003DMG400028126 ID=PGSC0003DMT400072274.v4.03 annot-version=v4.03
Sequence

ATGGATAGACTATTAACTCTAGAGCCATCTAACGTGGTTACAATACGACTTGAACCAGGT
CAGAAGTGTTCAGGTGAGTTAACCCTACGAAACGTCATGTACACCATGCCAGTTGCGTTT
CGTCTGCAGCCAGTAAACAAGACACGTTACACGATCCGTCCTCAATCGGGGATCATCTCT
CCTCTAACAACAATCACTTTGGAGATAATTTACCATCTCCCTCCAAACACAACTCTACCA
AACACTTTCCCTCACTCTGATGACTCATTCCTCTTGCATAGTGTTGTGGCCCCAGGAGCA
GCTATTAACAATAAGGCCACTTCTCCCACTTTATTAGATATGGTCCCAATTGATTGGTTC
ACTACAAAGAAAAAACAAGTTTTCATAGATAGTGCTATAAAAGTAATGTTTATTGGTTCA
CCTGTTTTGTGCTATCTTGTTAAAAAAGGCTATATGGATGAAATTAGAGAGGTTTTAGAA
AAAAGTGACTATAATTGCAAACCTGCTGACTCAGTTGACTTTGAAGGTCAAACATTACTA
CATTTGGCTATTTCACAAAGTAGGGCTGATTTAGTCCAATTGTTACTTGAATTTGGGCCT
AACATTGAGGCCCATAGTAGATCATGTTCAAGCCCATTAGAAGCAGCAGCAGCATTAGGA
GAGTCTTTAATTGTTGAACTTTTATTAGCAAAAAAGGCTAAAACTGAAAGAACAGAGTAC
TCTGCTTCAGGCCCAATACATCTTGCTGCTGGAAATGGCCATTTGGAAGTACTAAAACTA
CTCTTACTCAATGGAGCTAATGTGAATGCACTAACGAAAGACGGTAACACGGCCTTGCAT
ATCGCGGTGGAGGAAGGTAGACGAGATTGTGTTCGTGTTTTATTGGCTAATGGCGCGAGA
GCTGATGAGCGAAACGAGGGGAATTGTGATACACCTTTGCATATTGCTGCTGGATTAGGT
GATGAACATATGGTACGTGTTTTAATTCAAAAAGGTACAGAGAAAAATGTACGTAACAAG
TATGGGAAAACTGCTTATGATGTTGCTGCTGAACATGGACATAACAAGCTTTTCGATGCT
CTACGTTTAGGTGACAGCCTATGTGTAGCGGCTCGAAAAGGAGAGGTAAGAACCATCCAA
CGTCTCCTCGAAAACGGAGCCAGCATCAACGGACGTGACCAACATGGTTGGACCGCGTTG
CACCGGGCTAGTTTCAAAGGACGAATAGAAGTTGTAAAAGCATTAATAGAAAATGGAATT
GATATAAATGCAAAAGATGAAGATGGATATAGTGCATTACATTGTGCTGTTGAATCTGGA
CATGTTGATGTAGCTGAACTACTAGTTAAAAAAGGTGCAGACATTGATTCAAGGACTAGT
AAAGGTGTTACTCCATTACGTATCGCGGAATCGTTGAAATATTCGGGGTTGACTAGGGTA
ATCATGCAAGGTAACGGAGCGAAAGAACAAGTAGGGGCAAAATTGGAAATGAATTTCGCG
AAATCGTATGGTAAAATGGCTAAAGATGTCGAAATTATTGGGAGTGTGAAGAAAAGAAGT
CATGTTAATAAATCGTCAAGAGTTCGGAGGAGTAGCATTGATAGAACTGTTCCATTAGCC
TGTTGA