Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072259
CDS Infomation

pacid=37479125 polypeptide=PGSC0003DMP400048855 locus=PGSC0003DMG400028120 ID=PGSC0003DMT400072259.v4.03 annot-version=v4.03
Sequence

ATGGATTCCCAAACAACAGTTAAAACCTTAACAGAACATTCTCTTCAGTACAGAGCTTTT
GTTCAAAACCATATACTAAAAGATGCATCATTTTCTTCATATCTCAAACCAGAAGATCAT
AGTGTTGATGATTCCGAAATCAACGTGTTCGATGCGAAAAAATATTTCAGTGAAGGCAAT
GAATCATCTTCTGTTGTTAAAAAAAATGTAAATGATCAATGTGAATTACCATCAGGTCAT
CGGCATTCATCAGTTTCTTCCGTAGACAATGCCTACGGAAGAAACTTTCGTGCTAATTCC
TTTCGTGCTACTCCAACTGCTTCGTCAGAAGCAAGTTGGAATAGCCAGACAGGACTATTA
GCAAATCCTCCAGGTGCAATTGCAGTTTCATTGAAGAGTATTAATACGAATGACAAAAAA
AGAGGTTCGTTTAGTACTCGTAAATGGTTTTTCTGTCGAAAATGCCCTTGTTCTGGGAAG
AAATCTGTGCAAGTCGAGGAAGCTAGCTCGGAGCCAAGAACAGAAACTGGCTCCGAGCAG
CATTTCCCTGTCAAACACAGTAATAAGATTGTAGTTGAGAAATCAACTAACATATCTCAG
AAAAAATCTATTGAAATACAACAGGGAGGAGCCGTTAGGTCAGAGACTAATAAAATTGGA
ACGATTCAGAGAAGATCATCAGAGTCAGAGAATAGTACAGCTAGCACAATTAGCTGTCAA
CAGCGTGTGCTGGCACCGGTTAGACCGTTTACCGAGACGCCAAGTGGAGGCTTTTCATTC
CCAATTCTGAACAATTCAGGTCAATCGAAATTAGGAATCAAACCTCCACCAACAAGATCA
TCGATTTCTCCAATTTTAGAAGATCCGCCTCGAGATTCACTCGAGGTATTTCAACCATCT
TCTCGAAAATCAATCGAAACAGATCACCACCGATGCAATAATTTCCCCTTCCCAGGTAGT
CCAATTTCTCGAATAACAGCAACAGATGACGACGTAGCAAGCGATGCAAGCTCCGATCTA
TTCGAAATCGAGAGCTTTTCGACTTCAATGGCGAATTCATCCTGTCCATTATATCGTCAA
CGAAGTTCACTCGAGGAGCCTGGTACACCGAGTGTTGCAGCTACAGAGTGTTATGCACCA
AGTGAAGTTAGTATTGATTGGAGTGTTACAACAGCTGAAGGTTTCGATCGGGCTAGTGTT
ACTAATTATTCAACTATTTCAGAAATCGAGACGAATACTCGATTTTTTGGTGGTAATGAT
GGTGGTGGTGATGGAGGGAAGTGGAAAGGGGGTGGATTGTTGAGTTGTCGGCATGAAAAG
GCAGTAAATGTGGGACCGCAGCCAATTAAATATGGGTCGCCCGATGGGCTACCACGACTA
CTGCCGTTGAAATCAACGGCAGGACATGTGGGAAGTAGGCCAATAGGTAGAGCTAATAAG
CCACCTCTTGCAAGCTCTCATTCAGCACGCTTGTCTCTTGCATTTGCAGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400048855
PEP Infomation

pacid=37479125 transcript=PGSC0003DMT400072259 locus=PGSC0003DMG400028120 ID=PGSC0003DMT400072259.v4.03 annot-version=v4.03
Sequence

MDSQTTVKTLTEHSLQYRAFVQNHILKDASFSSYLKPEDHSVDDSEINVFDAKKYFSEGN
ESSSVVKKNVNDQCELPSGHRHSSVSSVDNAYGRNFRANSFRATPTASSEASWNSQTGLL
ANPPGAIAVSLKSINTNDKKRGSFSTRKWFFCRKCPCSGKKSVQVEEASSEPRTETGSEQ
HFPVKHSNKIVVEKSTNISQKKSIEIQQGGAVRSETNKIGTIQRRSSESENSTASTISCQ
QRVLAPVRPFTETPSGGFSFPILNNSGQSKLGIKPPPTRSSISPILEDPPRDSLEVFQPS
SRKSIETDHHRCNNFPFPGSPISRITATDDDVASDASSDLFEIESFSTSMANSSCPLYRQ
RSSLEEPGTPSVAATECYAPSEVSIDWSVTTAEGFDRASVTNYSTISEIETNTRFFGGND
GGGDGGKWKGGGLLSCRHEKAVNVGPQPIKYGSPDGLPRLLPLKSTAGHVGSRPIGRANK
PPLASSHSARLSLAFAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400072259
Transcript Infomation

pacid=37479125 locus=PGSC0003DMG400028120 ID=PGSC0003DMT400072259.v4.03 annot-version=v4.03
Sequence

ATGGATTCCCAAACAACAGTTAAAACCTTAACAGAACATTCTCTTCAGTACAGAGCTTTT
GTTCAAAACCATATACTAAAAGATGCATCATTTTCTTCATATCTCAAACCAGAAGATCAT
AGTGTTGATGATTCCGAAATCAACGTGTTCGATGCGAAAAAATATTTCAGTGAAGGCAAT
GAATCATCTTCTGTTGTTAAAAAAAATGTAAATGATCAATGTGAATTACCATCAGGTCAT
CGGCATTCATCAGTTTCTTCCGTAGACAATGCCTACGGAAGAAACTTTCGTGCTAATTCC
TTTCGTGCTACTCCAACTGCTTCGTCAGAAGCAAGTTGGAATAGCCAGACAGGACTATTA
GCAAATCCTCCAGGTGCAATTGCAGTTTCATTGAAGAGTATTAATACGAATGACAAAAAA
AGAGGTTCGTTTAGTACTCGTAAATGGTTTTTCTGTCGAAAATGCCCTTGTTCTGGGAAG
AAATCTGTGCAAGTCGAGGAAGCTAGCTCGGAGCCAAGAACAGAAACTGGCTCCGAGCAG
CATTTCCCTGTCAAACACAGTAATAAGATTGTAGTTGAGAAATCAACTAACATATCTCAG
AAAAAATCTATTGAAATACAACAGGGAGGAGCCGTTAGGTCAGAGACTAATAAAATTGGA
ACGATTCAGAGAAGATCATCAGAGTCAGAGAATAGTACAGCTAGCACAATTAGCTGTCAA
CAGCGTGTGCTGGCACCGGTTAGACCGTTTACCGAGACGCCAAGTGGAGGCTTTTCATTC
CCAATTCTGAACAATTCAGGTCAATCGAAATTAGGAATCAAACCTCCACCAACAAGATCA
TCGATTTCTCCAATTTTAGAAGATCCGCCTCGAGATTCACTCGAGGTATTTCAACCATCT
TCTCGAAAATCAATCGAAACAGATCACCACCGATGCAATAATTTCCCCTTCCCAGGTAGT
CCAATTTCTCGAATAACAGCAACAGATGACGACGTAGCAAGCGATGCAAGCTCCGATCTA
TTCGAAATCGAGAGCTTTTCGACTTCAATGGCGAATTCATCCTGTCCATTATATCGTCAA
CGAAGTTCACTCGAGGAGCCTGGTACACCGAGTGTTGCAGCTACAGAGTGTTATGCACCA
AGTGAAGTTAGTATTGATTGGAGTGTTACAACAGCTGAAGGTTTCGATCGGGCTAGTGTT
ACTAATTATTCAACTATTTCAGAAATCGAGACGAATACTCGATTTTTTGGTGGTAATGAT
GGTGGTGGTGATGGAGGGAAGTGGAAAGGGGGTGGATTGTTGAGTTGTCGGCATGAAAAG
GCAGTAAATGTGGGACCGCAGCCAATTAAATATGGGTCGCCCGATGGGCTACCACGACTA
CTGCCGTTGAAATCAACGGCAGGACATGTGGGAAGTAGGCCAATAGGTAGAGCTAATAAG
CCACCTCTTGCAAGCTCTCATTCAGCACGCTTGTCTCTTGCATTTGCAGCATGA