Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072211
CDS Infomation

pacid=37479793 polypeptide=PGSC0003DMP400048816 locus=PGSC0003DMG400028099 ID=PGSC0003DMT400072211.v4.03 annot-version=v4.03
Sequence

ATGGCTGCAAGAAATATTCTTCAACAGCAAAACAGAGGTGAGGCAGTCCCTGGAGCCATA
AAGCAGAAGAATATGGCAGGAGCACAAGGGAGAAACCGCAAGGCGCTTGGTGATATTGGG
AATATGGTAACGGTGCGTGGTGGGGTCGAGGGGGGGAAGCCGCTTCCTCAAGTATCTCGT
CCCATAACGAGGAGCTTTTGTGCACAATTGCTTGCTAATGCACAAGCTGCAGCTGATAAC
CAGAAGAAATCAATGGTTGTTAATGGCGATGGACCGATTGTTGCTAACGGAGCTTTACCG
GTTAAAGCTGCACCAGTAGCAAGAAAACCAGCTCAGAAGAAAGCAGCAGCTATTGTAAAA
CCAATGCCTGAGGTAATCGAAATTAGTCCTGATACTGTTGAACAAGTGAAGGAAAATAAG
CAAAAGAAGAAGGCTGCTAATGACTCTTCAATGAAGAAAGCAGCAACTCTTACTTCAACT
CTCACTGCTAGGAGTAAGGCTGCCTGTGGTTTAAGTCATAAACCAAAGAACCAGATTGTG
GACATTGATGCTACTGATGTGAATAATGAATTGGCAGTGTTGGAATATGTTGAGGATATT
TACACCTTTTATAAGATAGCTGAGAATGAGAGCAGAATTCATGACTACATGGATTCACAG
CCTGAGATAAATGAAAGGATGAGGTCTATTCTGATTGATTGGTTGATTGAAGTACATCAA
AAGTTTGAGCTAAATCAAGAGACTCTTTACCTCACCATCAATATCGTTGATCGTTACCTT
GCTGTAACGACTACATCAAGGAGGGAATTGCAGTTAGTAGGCATGAGTGCTATGCTCATT
GCATCCAAATATGAAGAAATTTGGGCACCTGAGGTGAATGATTTTGTGTGCATCTCAGAC
AGAGCTTATGATCATGAGCAGGTTTTAGGAATGGAAAAAAGGATTCTTGGACAATTGGAG
TGGTACTTAACGGTACCAACGCCTTATGTGTTCCTTGTTCGATTCATCAAGGCTGCTGTT
TCTGATGCACACGCGAATGTTGCTGTCTTGAATTCTTGCAATGTGACCTCAATGGAAAAC
ATGGTTTATTTCTTGGCTGAATTGGGGCTGATGAATTATGCTACGAATATCTACTGCTCG
TCGATGATTGCTGCCTCAGCAGTCTATGTTGCTCGACACGCGCTGAATTGTAGTCCTTTT
TGGAATGAGACACTGAAATTGCATACTGGTTTCTCAGAGTCTCAGCTTCTAGGTTGTGCT
AAGTTGCTGGTGAGTTATCATATGGAGGCACCACAACACAAGCTAAGGGTGATTTACAAG
AAGTATTCGAGTTCGCATAGAGGTGCTGTTGCACTGAATCCTCCAGCCATTTCCCTGTTG
GCTCTTCATGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400048816
PEP Infomation

pacid=37479793 transcript=PGSC0003DMT400072211 locus=PGSC0003DMG400028099 ID=PGSC0003DMT400072211.v4.03 annot-version=v4.03
Sequence

MAARNILQQQNRGEAVPGAIKQKNMAGAQGRNRKALGDIGNMVTVRGGVEGGKPLPQVSR
PITRSFCAQLLANAQAAADNQKKSMVVNGDGPIVANGALPVKAAPVARKPAQKKAAAIVK
PMPEVIEISPDTVEQVKENKQKKKAANDSSMKKAATLTSTLTARSKAACGLSHKPKNQIV
DIDATDVNNELAVLEYVEDIYTFYKIAENESRIHDYMDSQPEINERMRSILIDWLIEVHQ
KFELNQETLYLTINIVDRYLAVTTTSRRELQLVGMSAMLIASKYEEIWAPEVNDFVCISD
RAYDHEQVLGMEKRILGQLEWYLTVPTPYVFLVRFIKAAVSDAHANVAVLNSCNVTSMEN
MVYFLAELGLMNYATNIYCSSMIAASAVYVARHALNCSPFWNETLKLHTGFSESQLLGCA
KLLVSYHMEAPQHKLRVIYKKYSSSHRGAVALNPPAISLLALHE*

Transcript Sequence

Transcript ID

PGSC0003DMT400072211
Transcript Infomation

pacid=37479793 locus=PGSC0003DMG400028099 ID=PGSC0003DMT400072211.v4.03 annot-version=v4.03
Sequence

ATGGCTGCAAGAAATATTCTTCAACAGCAAAACAGAGGTGAGGCAGTCCCTGGAGCCATA
AAGCAGAAGAATATGGCAGGAGCACAAGGGAGAAACCGCAAGGCGCTTGGTGATATTGGG
AATATGGTAACGGTGCGTGGTGGGGTCGAGGGGGGGAAGCCGCTTCCTCAAGTATCTCGT
CCCATAACGAGGAGCTTTTGTGCACAATTGCTTGCTAATGCACAAGCTGCAGCTGATAAC
CAGAAGAAATCAATGGTTGTTAATGGCGATGGACCGATTGTTGCTAACGGAGCTTTACCG
GTTAAAGCTGCACCAGTAGCAAGAAAACCAGCTCAGAAGAAAGCAGCAGCTATTGTAAAA
CCAATGCCTGAGGTAATCGAAATTAGTCCTGATACTGTTGAACAAGTGAAGGAAAATAAG
CAAAAGAAGAAGGCTGCTAATGACTCTTCAATGAAGAAAGCAGCAACTCTTACTTCAACT
CTCACTGCTAGGAGTAAGGCTGCCTGTGGTTTAAGTCATAAACCAAAGAACCAGATTGTG
GACATTGATGCTACTGATGTGAATAATGAATTGGCAGTGTTGGAATATGTTGAGGATATT
TACACCTTTTATAAGATAGCTGAGAATGAGAGCAGAATTCATGACTACATGGATTCACAG
CCTGAGATAAATGAAAGGATGAGGTCTATTCTGATTGATTGGTTGATTGAAGTACATCAA
AAGTTTGAGCTAAATCAAGAGACTCTTTACCTCACCATCAATATCGTTGATCGTTACCTT
GCTGTAACGACTACATCAAGGAGGGAATTGCAGTTAGTAGGCATGAGTGCTATGCTCATT
GCATCCAAATATGAAGAAATTTGGGCACCTGAGGTGAATGATTTTGTGTGCATCTCAGAC
AGAGCTTATGATCATGAGCAGGTTTTAGGAATGGAAAAAAGGATTCTTGGACAATTGGAG
TGGTACTTAACGGTACCAACGCCTTATGTGTTCCTTGTTCGATTCATCAAGGCTGCTGTT
TCTGATGCACACGCGAATGTTGCTGTCTTGAATTCTTGCAATGTGACCTCAATGGAAAAC
ATGGTTTATTTCTTGGCTGAATTGGGGCTGATGAATTATGCTACGAATATCTACTGCTCG
TCGATGATTGCTGCCTCAGCAGTCTATGTTGCTCGACACGCGCTGAATTGTAGTCCTTTT
TGGAATGAGACACTGAAATTGCATACTGGTTTCTCAGAGTCTCAGCTTCTAGGTTGTGCT
AAGTTGCTGGTGAGTTATCATATGGAGGCACCACAACACAAGCTAAGGGTGATTTACAAG
AAGTATTCGAGTTCGCATAGAGGTGCTGTTGCACTGAATCCTCCAGCCATTTCCCTGTTG
GCTCTTCATGAATAA