Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072173
CDS Infomation

pacid=37430032 polypeptide=PGSC0003DMP400048789 locus=PGSC0003DMG400028085 ID=PGSC0003DMT400072173.v4.03 annot-version=v4.03
Sequence

ATGATTAGTGACGCATTTGGGCAGTATAGGCAGCAATCGGCTGATGTAGGAACATCTCAA
CCATTTGGTTCAACTGAAACATCAAATGAGGGGCATAGGGAGGATACTGGTGACTTTCGC
GACTTTCTCAAAGATGCAAGTGAAACACTGTATGAAGGGAGCAAGTATACAAAGTTAGAG
TTTTTAATAAAAGTGTATCATATAAAGGTCTATTGTCAATTAAGTGACAAGGCAATGACC
ATGATACTAGATTTATTGAGAGATGCATTTGAAGATGCAAAGTTACCTCCTTCTTTTTAT
GAGGCCAAAAAAACAATTAGCAAACTTGGCCTTGACTACACCAATATACCAGCATGTCCA
AATAATTGTATGTTATTCTGGGAAGGTGATTCTGAATTGGAAGCATGTAAGCATTGTGGT
ACATCTAAATGGAATCCTAACAAGAAATACAAGCAAGCTACAAAGGTTTTGCATTACTTT
CCATTGAAACCAAGGTTGAAAAGGTTATTTATGTGTCGCAAGACTGCTGAGCATATGAGA
TGGCATGCTTTGGACAGTAACTCAGATGGGTTGATGAGGCATCCAAGGGATGGTGAGGCA
TGGAAGACATTTGATCGAACTCACTCTGGATTTGCTTCTGATCCTCGAAATGTTCGGTTG
GGCCTCGCTAGCGATGGTTTTAATCCTTTTGGAACAATGAGTACTACCTACAGTATTTGG
CCAGTCTTCTTGATTCCGTACAATCTTCCTCCTTGGATGTGTATGAAGCACACCTCTTTC
ATCTTATCAATGATCATTCCAGGCAAGCAGATGCCTGGAAATAATATAGATGTGTACTTA
CAGCCTCTTGTGAAGGAATTGTGTGAGTTATGGAATGATGGTGTTGAAACGTTTGACTCA
TCATTGAATGAAACTTTCAGAATGCATGCCGCTCTTATGTGGACAATTAGTGACTTTCCT
GGATTAGGTATCCTCTCTGGCTGGAATACACATACTGGTTTTGCTTGCCCAACTTGTAAC
TTTGACACAGAACCTTGTCGTCTTGTTCATAGTAAAAAGTGGTGTTTTATGGGTCATCGT
CGTTTCCTGAGAAGAAATCACAGGTTCAGATTCAACCGAGTGCGCTTCAATGGAAGCACA
GAGGAGCGGAATCCACCAATAAAACTATCAGGATCTGACATTTTGAGACAAATTGCGGAA
GGTAAAGGAGCAAAGTTGGATGGTAAAAGGAAAAGATCTAGACGAGCAACTAAACAATGG
AACAAGAGAAGTATATTTTTTGAACTTCCTTATTGGCAGTCTAACTTGTTGCGTCATATT
CTAGATTTTATGCCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400048789
PEP Infomation

pacid=37430032 transcript=PGSC0003DMT400072173 locus=PGSC0003DMG400028085 ID=PGSC0003DMT400072173.v4.03 annot-version=v4.03
Sequence

MISDAFGQYRQQSADVGTSQPFGSTETSNEGHREDTGDFRDFLKDASETLYEGSKYTKLE
FLIKVYHIKVYCQLSDKAMTMILDLLRDAFEDAKLPPSFYEAKKTISKLGLDYTNIPACP
NNCMLFWEGDSELEACKHCGTSKWNPNKKYKQATKVLHYFPLKPRLKRLFMCRKTAEHMR
WHALDSNSDGLMRHPRDGEAWKTFDRTHSGFASDPRNVRLGLASDGFNPFGTMSTTYSIW
PVFLIPYNLPPWMCMKHTSFILSMIIPGKQMPGNNIDVYLQPLVKELCELWNDGVETFDS
SLNETFRMHAALMWTISDFPGLGILSGWNTHTGFACPTCNFDTEPCRLVHSKKWCFMGHR
RFLRRNHRFRFNRVRFNGSTEERNPPIKLSGSDILRQIAEGKGAKLDGKRKRSRRATKQW
NKRSIFFELPYWQSNLLRHILDFMP*

Transcript Sequence

Transcript ID

PGSC0003DMT400072173
Transcript Infomation

pacid=37430032 locus=PGSC0003DMG400028085 ID=PGSC0003DMT400072173.v4.03 annot-version=v4.03
Sequence

ATGATTAGTGACGCATTTGGGCAGTATAGGCAGCAATCGGCTGATGTAGGAACATCTCAA
CCATTTGGTTCAACTGAAACATCAAATGAGGGGCATAGGGAGGATACTGGTGACTTTCGC
GACTTTCTCAAAGATGCAAGTGAAACACTGTATGAAGGGAGCAAGTATACAAAGTTAGAG
TTTTTAATAAAAGTGTATCATATAAAGGTCTATTGTCAATTAAGTGACAAGGCAATGACC
ATGATACTAGATTTATTGAGAGATGCATTTGAAGATGCAAAGTTACCTCCTTCTTTTTAT
GAGGCCAAAAAAACAATTAGCAAACTTGGCCTTGACTACACCAATATACCAGCATGTCCA
AATAATTGTATGTTATTCTGGGAAGGTGATTCTGAATTGGAAGCATGTAAGCATTGTGGT
ACATCTAAATGGAATCCTAACAAGAAATACAAGCAAGCTACAAAGGTTTTGCATTACTTT
CCATTGAAACCAAGGTTGAAAAGGTTATTTATGTGTCGCAAGACTGCTGAGCATATGAGA
TGGCATGCTTTGGACAGTAACTCAGATGGGTTGATGAGGCATCCAAGGGATGGTGAGGCA
TGGAAGACATTTGATCGAACTCACTCTGGATTTGCTTCTGATCCTCGAAATGTTCGGTTG
GGCCTCGCTAGCGATGGTTTTAATCCTTTTGGAACAATGAGTACTACCTACAGTATTTGG
CCAGTCTTCTTGATTCCGTACAATCTTCCTCCTTGGATGTGTATGAAGCACACCTCTTTC
ATCTTATCAATGATCATTCCAGGCAAGCAGATGCCTGGAAATAATATAGATGTGTACTTA
CAGCCTCTTGTGAAGGAATTGTGTGAGTTATGGAATGATGGTGTTGAAACGTTTGACTCA
TCATTGAATGAAACTTTCAGAATGCATGCCGCTCTTATGTGGACAATTAGTGACTTTCCT
GGATTAGGTATCCTCTCTGGCTGGAATACACATACTGGTTTTGCTTGCCCAACTTGTAAC
TTTGACACAGAACCTTGTCGTCTTGTTCATAGTAAAAAGTGGTGTTTTATGGGTCATCGT
CGTTTCCTGAGAAGAAATCACAGGTTCAGATTCAACCGAGTGCGCTTCAATGGAAGCACA
GAGGAGCGGAATCCACCAATAAAACTATCAGGATCTGACATTTTGAGACAAATTGCGGAA
GGTAAAGGAGCAAAGTTGGATGGTAAAAGGAAAAGATCTAGACGAGCAACTAAACAATGG
AACAAGAGAAGTATATTTTTTGAACTTCCTTATTGGCAGTCTAACTTGTTGCGTCATATT
CTAGATTTTATGCCATAA