Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072104
CDS Infomation

pacid=37468715 polypeptide=PGSC0003DMP400048741 locus=PGSC0003DMG400028053 ID=PGSC0003DMT400072104.v4.03 annot-version=v4.03
Sequence

ATGTCTCTCAAATTCTTCAAACCCCTTTTTGATTCATTCCCATGGCTCCTTCAAGAACTC
AATGTTGAGCAAAAGGGGGTGTTTATCTCCTATTTTCTTGGGTTTTTAGCTTTACTATGG
TTCCTTTTGTTTTTCATCAGAAACTCAAACAAGGGATTGCCACCAGGGCCTAAAGCCTTG
CCCTTGATAGGTAATCTCCTCTCTCTTGATCCTGAACTTCACACCTATTTTGCATCTCTG
TCCCAAACATATGGCCCCATTTGTAGACTCTGGCTTGGTAAAAAACTTGGGATTATTATT
AGTTCACCTGCTTTAGCTCGCGAGGTTCTTAAGCATAAAGATACCATTTTTGCAAACAGA
GATGTGTCTGCTGCTGGAAGAGAATTTTCATATGGTATCAATGACTTACTTTGGAGTCCT
TATGGACCGAAATGGCGAATGTTGAGGAAGCTTTGTGTTCGCGATATGCTTAGTTGTTCT
AGTTTAGATTCTGTTTATGCACTAAGGAGAAGGGAACTTAGACAATCGATCAATTACTTT
TATAGTCAGAAGGGTTTACCTGTGAACATTGGTGAACAGATGTTCTTGACTGTGTTTAAT
GTTATTACAAGCATGTTATGGGGTGGCACGGTGAAGGGTGGGGAAAGAGCTAGTCTTGGA
GCTGAGTTTAGGCATGTTGTGACTGAGATAGTTGAGTTGGTCAGTATTCCCAATCTTTCC
GATTTTTACCCGGGTTTGACCTGGTTTGATTTCCAGGGTGTTATAAAGAAGATGAAGGTG
GTTTTAAAGAGATTTGATAAGATATTTGAAAGCATAATTGATCAAAGACAAAAATTGGAC
AGAAATGGTGTTGTCCAAGAAAGCAAAGACTTTTTGCAAGTTTTGCTGAAGTTGAAAGAT
GAAGCAGATCCCAAAATGCCTCTGACTATGACTGAAATCAAAGCCTTACTTATGGATTTG
GTTGTCGGTGGAACTGACACAACCTCCAACGCGGTTGAGTTTGCCATGACTGAAATTTTG
AACAAACCAGACGTCTTGAGGAAATTACAACAAGAAGTGGATACAGTTGTGGGAAAAGAT
AACATAGTGGAAGAGTCTCATATTCAACAGTTACCATATTTCTATGCAGTGATGAAAGAA
GTCTTGCGTCTACATCCAGCTCTCCCACTCTTGGCTCCTCATTGTCCTAGTGAGACAGTC
ACTGTTGGAGGATACACTGTTCCTAAAGGGTCTCATATTTTCGTAAATGTATGGGCTATA
CACAGAGATCCTTCTATCTGGAAAAATCCAACAGAGTTCCGTCCTGAGAGATTTTTGCAC
AATAAATGGGATTATAGTGGAAATGATTTCAACTATTTCCCATTTGGTTCTGGCAGAAGA
ATGTGTGCGGGGATAGCCATGGCAGAGAGGATGTTCATGTATTCATTGGCTTCGCTCATT
CATTCTTTCGATTGGAAATTGCCCGAAGGAAAGACATTAGACCTTAAAGAGAAGTTTGGT
ATTACTTTGAAGAAGAAAATGCCTCTGGTAGCTATACCTACTCCAAGATTGTTCAATCCA
ACATTGTATGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048741
PEP Infomation

pacid=37468715 transcript=PGSC0003DMT400072104 locus=PGSC0003DMG400028053 ID=PGSC0003DMT400072104.v4.03 annot-version=v4.03
Sequence

MSLKFFKPLFDSFPWLLQELNVEQKGVFISYFLGFLALLWFLLFFIRNSNKGLPPGPKAL
PLIGNLLSLDPELHTYFASLSQTYGPICRLWLGKKLGIIISSPALAREVLKHKDTIFANR
DVSAAGREFSYGINDLLWSPYGPKWRMLRKLCVRDMLSCSSLDSVYALRRRELRQSINYF
YSQKGLPVNIGEQMFLTVFNVITSMLWGGTVKGGERASLGAEFRHVVTEIVELVSIPNLS
DFYPGLTWFDFQGVIKKMKVVLKRFDKIFESIIDQRQKLDRNGVVQESKDFLQVLLKLKD
EADPKMPLTMTEIKALLMDLVVGGTDTTSNAVEFAMTEILNKPDVLRKLQQEVDTVVGKD
NIVEESHIQQLPYFYAVMKEVLRLHPALPLLAPHCPSETVTVGGYTVPKGSHIFVNVWAI
HRDPSIWKNPTEFRPERFLHNKWDYSGNDFNYFPFGSGRRMCAGIAMAERMFMYSLASLI
HSFDWKLPEGKTLDLKEKFGITLKKKMPLVAIPTPRLFNPTLYE*

Transcript Sequence

Transcript ID

PGSC0003DMT400072104
Transcript Infomation

pacid=37468715 locus=PGSC0003DMG400028053 ID=PGSC0003DMT400072104.v4.03 annot-version=v4.03
Sequence

ATGTCTCTCAAATTCTTCAAACCCCTTTTTGATTCATTCCCATGGCTCCTTCAAGAACTC
AATGTTGAGCAAAAGGGGGTGTTTATCTCCTATTTTCTTGGGTTTTTAGCTTTACTATGG
TTCCTTTTGTTTTTCATCAGAAACTCAAACAAGGGATTGCCACCAGGGCCTAAAGCCTTG
CCCTTGATAGGTAATCTCCTCTCTCTTGATCCTGAACTTCACACCTATTTTGCATCTCTG
TCCCAAACATATGGCCCCATTTGTAGACTCTGGCTTGGTAAAAAACTTGGGATTATTATT
AGTTCACCTGCTTTAGCTCGCGAGGTTCTTAAGCATAAAGATACCATTTTTGCAAACAGA
GATGTGTCTGCTGCTGGAAGAGAATTTTCATATGGTATCAATGACTTACTTTGGAGTCCT
TATGGACCGAAATGGCGAATGTTGAGGAAGCTTTGTGTTCGCGATATGCTTAGTTGTTCT
AGTTTAGATTCTGTTTATGCACTAAGGAGAAGGGAACTTAGACAATCGATCAATTACTTT
TATAGTCAGAAGGGTTTACCTGTGAACATTGGTGAACAGATGTTCTTGACTGTGTTTAAT
GTTATTACAAGCATGTTATGGGGTGGCACGGTGAAGGGTGGGGAAAGAGCTAGTCTTGGA
GCTGAGTTTAGGCATGTTGTGACTGAGATAGTTGAGTTGGTCAGTATTCCCAATCTTTCC
GATTTTTACCCGGGTTTGACCTGGTTTGATTTCCAGGGTGTTATAAAGAAGATGAAGGTG
GTTTTAAAGAGATTTGATAAGATATTTGAAAGCATAATTGATCAAAGACAAAAATTGGAC
AGAAATGGTGTTGTCCAAGAAAGCAAAGACTTTTTGCAAGTTTTGCTGAAGTTGAAAGAT
GAAGCAGATCCCAAAATGCCTCTGACTATGACTGAAATCAAAGCCTTACTTATGGATTTG
GTTGTCGGTGGAACTGACACAACCTCCAACGCGGTTGAGTTTGCCATGACTGAAATTTTG
AACAAACCAGACGTCTTGAGGAAATTACAACAAGAAGTGGATACAGTTGTGGGAAAAGAT
AACATAGTGGAAGAGTCTCATATTCAACAGTTACCATATTTCTATGCAGTGATGAAAGAA
GTCTTGCGTCTACATCCAGCTCTCCCACTCTTGGCTCCTCATTGTCCTAGTGAGACAGTC
ACTGTTGGAGGATACACTGTTCCTAAAGGGTCTCATATTTTCGTAAATGTATGGGCTATA
CACAGAGATCCTTCTATCTGGAAAAATCCAACAGAGTTCCGTCCTGAGAGATTTTTGCAC
AATAAATGGGATTATAGTGGAAATGATTTCAACTATTTCCCATTTGGTTCTGGCAGAAGA
ATGTGTGCGGGGATAGCCATGGCAGAGAGGATGTTCATGTATTCATTGGCTTCGCTCATT
CATTCTTTCGATTGGAAATTGCCCGAAGGAAAGACATTAGACCTTAAAGAGAAGTTTGGT
ATTACTTTGAAGAAGAAAATGCCTCTGGTAGCTATACCTACTCCAAGATTGTTCAATCCA
ACATTGTATGAGTAA