Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072098
CDS Infomation

pacid=37468955 polypeptide=PGSC0003DMP400048738 locus=PGSC0003DMG402028052 ID=PGSC0003DMT400072098.v4.03 annot-version=v4.03
Sequence

ATGTCTCTCGAATTCTTCAAACCCCTTTTTGATTCTTTCCCATGGCTCCTTCAACAACTC
AATGTTGAGCAACAGGCTGTGTTTTTCTCCTGTTTTCTTGTTTTTTTAGCTTTACTTTGG
TTTTTCATCAGTAACTCAAATGAGGGACTGCCACCAGGGCCTAAATCTTTGCCCTTGATA
GGTAATCTCCATTCTCTTGATCCTGAACTTCACACCTATTTTGCATCTCTGTCCCAAACT
TATGGCCCCATTTGTAGACTCTGGTTTGGTAAAAAACTTGGGATTATTATTACTTCACCA
GCATTAGCTCGTGAGGTTCTTAAGGATCAAGATACCATTTTTGCTAACAGAGATGTGCCT
GCTGCTGCAAGAGAAATTTCATACGGTTGCAATGACATACTTTGGAATTCTTATGGACCA
AAATGGCGAATGTTGAGGAAGGTTTGTGTTCGCGATATGCTTAGTTGTTCTACTTTAGAT
TCTGTTTATGCACTAAGGAGAAGGGAGTTTAGACAATCGATCAATTACTTCTATAGTCAG
AAGGGTTTACCAGTGAACGTTGGTGAACAGATGTTCTTGACTGTGTTTAATGTTATTACA
AGCATGTTATGGGGTGGTACGGTGAAGGGTGGGGAAAGAGCTAGTCTTGGATCTGAGTTT
AGGTATGTTGTGAGTGAGATGGCTGCGCTGTGCAGTATTCCCAATCTTTCCGATTTCTAC
CCAGGTTTGGCCTGGTTTGATTTCCAGGGTGTTACAAAGAAGATGAAGGTGTTGTTAAAG
AGATTTGAGAAGATATTTGATAGCATGATTGATGAAAGAAAAAAATTGGATAGAAATAGT
GTTGGCCAAGAAAGCAAAGACTTTTTGCAAGTTTTGCTGAAGTTGAAAGATGAAGCAGAT
GCCAAAATGCCTGTGACCATGACTGAAATCAAAGCCTTACTTATGGATATGATTGTTGGT
GGAACTGACAGTACCTCCAACGCGATTGAGTTTGCCATGGCTGAAATTATGATCAAACCG
GACGTCCTGAGGAAATTACAAGAAGAACTAGAGACAGTTGTGGGAAAGGATAATATTGTG
GAAGAGTCTCATATTAAGCAATTACCATATCTCTATGCAGTTATCAAAGAAATCTTGCGC
TTACATCCACCTGCTCCACTATTGGCGCCACATTGTCCTAGTGAAACATGCACTGTGGGA
GGATACACTGTTCCTAAAGGATCTTGTGTTTTCATAAATGTATGGGCTATACACAGAGAT
CCTTCTATATGGGAAAATCCAACTGAGTTCCGTCCAGAGAGATTTTTGGACAATAAACAC
GATTGTAGTGGAAATGATTTCAACTATTTCCCATTTGGTTCTGGAAGAAGAATGTGTGCG
GGGATAGCCATGGCAGAGAGGATGTTCATGTATTCAGTAGCTTCACTCATTCATTATTTC
GACTGGAAATTGCCTGAAGGAGAGACATTAGACCTCACAGAGAAGTTTGGGATTGTTCTG
AAGAAGAAAATGCCTCTGGTGGCTATACCTACTCCAAGATTGTCCAATCCAATACTCTAT
GAGAGAGATTATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400048738
PEP Infomation

pacid=37468955 transcript=PGSC0003DMT400072098 locus=PGSC0003DMG402028052 ID=PGSC0003DMT400072098.v4.03 annot-version=v4.03
Sequence

MSLEFFKPLFDSFPWLLQQLNVEQQAVFFSCFLVFLALLWFFISNSNEGLPPGPKSLPLI
GNLHSLDPELHTYFASLSQTYGPICRLWFGKKLGIIITSPALAREVLKDQDTIFANRDVP
AAAREISYGCNDILWNSYGPKWRMLRKVCVRDMLSCSTLDSVYALRRREFRQSINYFYSQ
KGLPVNVGEQMFLTVFNVITSMLWGGTVKGGERASLGSEFRYVVSEMAALCSIPNLSDFY
PGLAWFDFQGVTKKMKVLLKRFEKIFDSMIDERKKLDRNSVGQESKDFLQVLLKLKDEAD
AKMPVTMTEIKALLMDMIVGGTDSTSNAIEFAMAEIMIKPDVLRKLQEELETVVGKDNIV
EESHIKQLPYLYAVIKEILRLHPPAPLLAPHCPSETCTVGGYTVPKGSCVFINVWAIHRD
PSIWENPTEFRPERFLDNKHDCSGNDFNYFPFGSGRRMCAGIAMAERMFMYSVASLIHYF
DWKLPEGETLDLTEKFGIVLKKKMPLVAIPTPRLSNPILYERDY*

Transcript Sequence

Transcript ID

PGSC0003DMT400072098
Transcript Infomation

pacid=37468955 locus=PGSC0003DMG402028052 ID=PGSC0003DMT400072098.v4.03 annot-version=v4.03
Sequence

ATGTCTCTCGAATTCTTCAAACCCCTTTTTGATTCTTTCCCATGGCTCCTTCAACAACTC
AATGTTGAGCAACAGGCTGTGTTTTTCTCCTGTTTTCTTGTTTTTTTAGCTTTACTTTGG
TTTTTCATCAGTAACTCAAATGAGGGACTGCCACCAGGGCCTAAATCTTTGCCCTTGATA
GGTAATCTCCATTCTCTTGATCCTGAACTTCACACCTATTTTGCATCTCTGTCCCAAACT
TATGGCCCCATTTGTAGACTCTGGTTTGGTAAAAAACTTGGGATTATTATTACTTCACCA
GCATTAGCTCGTGAGGTTCTTAAGGATCAAGATACCATTTTTGCTAACAGAGATGTGCCT
GCTGCTGCAAGAGAAATTTCATACGGTTGCAATGACATACTTTGGAATTCTTATGGACCA
AAATGGCGAATGTTGAGGAAGGTTTGTGTTCGCGATATGCTTAGTTGTTCTACTTTAGAT
TCTGTTTATGCACTAAGGAGAAGGGAGTTTAGACAATCGATCAATTACTTCTATAGTCAG
AAGGGTTTACCAGTGAACGTTGGTGAACAGATGTTCTTGACTGTGTTTAATGTTATTACA
AGCATGTTATGGGGTGGTACGGTGAAGGGTGGGGAAAGAGCTAGTCTTGGATCTGAGTTT
AGGTATGTTGTGAGTGAGATGGCTGCGCTGTGCAGTATTCCCAATCTTTCCGATTTCTAC
CCAGGTTTGGCCTGGTTTGATTTCCAGGGTGTTACAAAGAAGATGAAGGTGTTGTTAAAG
AGATTTGAGAAGATATTTGATAGCATGATTGATGAAAGAAAAAAATTGGATAGAAATAGT
GTTGGCCAAGAAAGCAAAGACTTTTTGCAAGTTTTGCTGAAGTTGAAAGATGAAGCAGAT
GCCAAAATGCCTGTGACCATGACTGAAATCAAAGCCTTACTTATGGATATGATTGTTGGT
GGAACTGACAGTACCTCCAACGCGATTGAGTTTGCCATGGCTGAAATTATGATCAAACCG
GACGTCCTGAGGAAATTACAAGAAGAACTAGAGACAGTTGTGGGAAAGGATAATATTGTG
GAAGAGTCTCATATTAAGCAATTACCATATCTCTATGCAGTTATCAAAGAAATCTTGCGC
TTACATCCACCTGCTCCACTATTGGCGCCACATTGTCCTAGTGAAACATGCACTGTGGGA
GGATACACTGTTCCTAAAGGATCTTGTGTTTTCATAAATGTATGGGCTATACACAGAGAT
CCTTCTATATGGGAAAATCCAACTGAGTTCCGTCCAGAGAGATTTTTGGACAATAAACAC
GATTGTAGTGGAAATGATTTCAACTATTTCCCATTTGGTTCTGGAAGAAGAATGTGTGCG
GGGATAGCCATGGCAGAGAGGATGTTCATGTATTCAGTAGCTTCACTCATTCATTATTTC
GACTGGAAATTGCCTGAAGGAGAGACATTAGACCTCACAGAGAAGTTTGGGATTGTTCTG
AAGAAGAAAATGCCTCTGGTGGCTATACCTACTCCAAGATTGTCCAATCCAATACTCTAT
GAGAGAGATTATTAG