Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072097
CDS Infomation

pacid=37468287 polypeptide=PGSC0003DMP400048737 locus=PGSC0003DMG401028052 ID=PGSC0003DMT400072097.v4.03 annot-version=v4.03
Sequence

ATGTCTCTCAAATTCTTCAAACTCCTTTTTGATTCTTTCCCATGGCTCCTTGAACAACTC
AATGTAGAGCAAAAGGGTGTGTTTTTCTTCTGTTTTCTTGGTTTTTTAGCTTTACTTTGG
TGTTTCATCAGTAACTCAAACAAGGGACTGCCACCAGGGCCTAAAGCTTTGCCCTTGATA
GGTAATCTCCATTCTCTTGATCCTGAACTTCACACCTATTTTGCATCTCTTTCCCAAACT
TATGGCCCCATTTGTAGACTCTGGCTTGGTAAAAAACTTGGTATTATTATTACTTCCCCT
GCTTTAGCTCGTGAGATTCTGAAGGATAAAGATACCATTTTTGCTAATAGAGATGTCCCT
GCTGCTGGAAGAGAATTTTCATATGGTGGTAATAACTTACTTTGGGCTCCTTATGGACCG
AAATGGCGAATGTTGAGGAAGGTTTGTGTTTGCGATATGCTTAGTTGTTCTACTTTAGAT
TCTGTTTATGCACTAAGGCAAAGGGAGCTTAGACAATCGATCAGTTACTTTTATAACAAG
GCAGGATCCCCTGTGAATGTTGGTGAACAGATGTTCTTGACTATTCTTAATGTGATTACA
AGCATGTTATGGGGTGGTACAGTGAAGGGTGAGGAAAGAGCTAGTCTTGGAGCTGAGTTT
AGGCATGTTGTGACTGAGATGTCTGCGCTGTGCAGTATTCCCAATCTTTCCGATTATTAC
CCAGGTTTGGCCTGGTTTGATTTCCAGGGTGTTACAAAGAAGATGAAGGTGCTGGTAAAG
AGATTTGATAAGCTATTTGATAGCATGATTGATCAAAGACAAAAATTGGACAGAAATGGT
GTTGGCCAAGAAAGCAAAGACTTTTTGCAAGTTTTGCTGAAGTTGAAAGATGAATCAGAT
GCCAAAATGCCGCTAACCATGATTGAACTCAAAGCCTTACTTATGGATATGATTATTGGT
GGAACTGACAGTACCTCCAATACGATTGAGTTTGCCATGGCTGAAATTATGAACAAACCA
GACGTCCTGAGGAAATTACAACAAGAACTGGAGGCAGTTGTGGGAAAAGATAATATTGTG
GATGAGTCTCATGTTAAGCAATTACCATATCTTTATGCAGTTATGAAAGAAGTCTTGCGC
ATACATCCAACTGCTCCAGTATTGGTGCCACATTGTCCAAGTGAAACATGCACTGTGGGA
GGATACACTGTTCCTAAAGGATCTTGTATTTTCATAAATGTATGGGCTATACACAGAGAT
CCTTCTATCTGGAAAAATCCAACAGAGTTCCGTCCAAAGAGATTTTTGGACAATAAATGG
GATTATAGTGGAAATGATTTCAACTATTTCCCATTTGGTTCTGGCAGAAGAATCTGTGCG
GGGATAGCCATGGCAGAGAGGATGTTCATGTATTCACTTGCTTCACTCATTCATTCTTTC
GACTGGAAATTGCCTGAAGGAGAGACATTAGAAGTTACAGAGAAGTTCGGTATTATTATG
AAGAAGAAAATGCCTCTGGTGGCTATACCTACTCCAAGATTGTCTAATCCAAAACTGTAT
GAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400048737
PEP Infomation

pacid=37468287 transcript=PGSC0003DMT400072097 locus=PGSC0003DMG401028052 ID=PGSC0003DMT400072097.v4.03 annot-version=v4.03
Sequence

MSLKFFKLLFDSFPWLLEQLNVEQKGVFFFCFLGFLALLWCFISNSNKGLPPGPKALPLI
GNLHSLDPELHTYFASLSQTYGPICRLWLGKKLGIIITSPALAREILKDKDTIFANRDVP
AAGREFSYGGNNLLWAPYGPKWRMLRKVCVCDMLSCSTLDSVYALRQRELRQSISYFYNK
AGSPVNVGEQMFLTILNVITSMLWGGTVKGEERASLGAEFRHVVTEMSALCSIPNLSDYY
PGLAWFDFQGVTKKMKVLVKRFDKLFDSMIDQRQKLDRNGVGQESKDFLQVLLKLKDESD
AKMPLTMIELKALLMDMIIGGTDSTSNTIEFAMAEIMNKPDVLRKLQQELEAVVGKDNIV
DESHVKQLPYLYAVMKEVLRIHPTAPVLVPHCPSETCTVGGYTVPKGSCIFINVWAIHRD
PSIWKNPTEFRPKRFLDNKWDYSGNDFNYFPFGSGRRICAGIAMAERMFMYSLASLIHSF
DWKLPEGETLEVTEKFGIIMKKKMPLVAIPTPRLSNPKLYE*

Transcript Sequence

Transcript ID

PGSC0003DMT400072097
Transcript Infomation

pacid=37468287 locus=PGSC0003DMG401028052 ID=PGSC0003DMT400072097.v4.03 annot-version=v4.03
Sequence

ATGTCTCTCAAATTCTTCAAACTCCTTTTTGATTCTTTCCCATGGCTCCTTGAACAACTC
AATGTAGAGCAAAAGGGTGTGTTTTTCTTCTGTTTTCTTGGTTTTTTAGCTTTACTTTGG
TGTTTCATCAGTAACTCAAACAAGGGACTGCCACCAGGGCCTAAAGCTTTGCCCTTGATA
GGTAATCTCCATTCTCTTGATCCTGAACTTCACACCTATTTTGCATCTCTTTCCCAAACT
TATGGCCCCATTTGTAGACTCTGGCTTGGTAAAAAACTTGGTATTATTATTACTTCCCCT
GCTTTAGCTCGTGAGATTCTGAAGGATAAAGATACCATTTTTGCTAATAGAGATGTCCCT
GCTGCTGGAAGAGAATTTTCATATGGTGGTAATAACTTACTTTGGGCTCCTTATGGACCG
AAATGGCGAATGTTGAGGAAGGTTTGTGTTTGCGATATGCTTAGTTGTTCTACTTTAGAT
TCTGTTTATGCACTAAGGCAAAGGGAGCTTAGACAATCGATCAGTTACTTTTATAACAAG
GCAGGATCCCCTGTGAATGTTGGTGAACAGATGTTCTTGACTATTCTTAATGTGATTACA
AGCATGTTATGGGGTGGTACAGTGAAGGGTGAGGAAAGAGCTAGTCTTGGAGCTGAGTTT
AGGCATGTTGTGACTGAGATGTCTGCGCTGTGCAGTATTCCCAATCTTTCCGATTATTAC
CCAGGTTTGGCCTGGTTTGATTTCCAGGGTGTTACAAAGAAGATGAAGGTGCTGGTAAAG
AGATTTGATAAGCTATTTGATAGCATGATTGATCAAAGACAAAAATTGGACAGAAATGGT
GTTGGCCAAGAAAGCAAAGACTTTTTGCAAGTTTTGCTGAAGTTGAAAGATGAATCAGAT
GCCAAAATGCCGCTAACCATGATTGAACTCAAAGCCTTACTTATGGATATGATTATTGGT
GGAACTGACAGTACCTCCAATACGATTGAGTTTGCCATGGCTGAAATTATGAACAAACCA
GACGTCCTGAGGAAATTACAACAAGAACTGGAGGCAGTTGTGGGAAAAGATAATATTGTG
GATGAGTCTCATGTTAAGCAATTACCATATCTTTATGCAGTTATGAAAGAAGTCTTGCGC
ATACATCCAACTGCTCCAGTATTGGTGCCACATTGTCCAAGTGAAACATGCACTGTGGGA
GGATACACTGTTCCTAAAGGATCTTGTATTTTCATAAATGTATGGGCTATACACAGAGAT
CCTTCTATCTGGAAAAATCCAACAGAGTTCCGTCCAAAGAGATTTTTGGACAATAAATGG
GATTATAGTGGAAATGATTTCAACTATTTCCCATTTGGTTCTGGCAGAAGAATCTGTGCG
GGGATAGCCATGGCAGAGAGGATGTTCATGTATTCACTTGCTTCACTCATTCATTCTTTC
GACTGGAAATTGCCTGAAGGAGAGACATTAGAAGTTACAGAGAAGTTCGGTATTATTATG
AAGAAGAAAATGCCTCTGGTGGCTATACCTACTCCAAGATTGTCTAATCCAAAACTGTAT
GAATAA