Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072037
CDS Infomation

pacid=37467120 polypeptide=PGSC0003DMP400048707 locus=PGSC0003DMG400028026 ID=PGSC0003DMT400072037.v4.03 annot-version=v4.03
Sequence

ATGGGAAGTAAAGAAAGGGAAATCAAATCACCTGAAGTTCAGTTAGGAGGGAATTCTACT
CCAAAACGGGGTTCAAAGAAACTCGGAATCTACTTCCTTGAATCGGATGATAGGAGAACA
GCTTTCGGACGTGGTTATAGTGGTGGAGTAGGAGGAGCTACTCCTGTGAATATCCATGGG
AAGCCTATTCCGGATATAAACAAGACGGGTGGCTGGATAGCTGCCTTGTTCATTTTCGGA
AATGAAATGGCTGAGAGAATGGCTTACTTTGGCCTATCTGTTAACATGGTGGCGTTCATG
TTCTACGTTATGCACAGGCCTTTTTCTAGCTCTGCCAATGCTGTTAACAATTTTTTGGGC
ATATCACAGGCTTCCTCTGTGTTGGGTGGTTTCGTTGCTGACGCTTACCTTGGTAGATAC
TGGACTATTGCGATCTTTACCACCATTTATCTTGCGGGATTAACAGGAATAACATTATTA
GCAACTATTAAGGTATTTGTGCCCAATCAAGATCAGTGTGATCAGATTGCCCTTCTTCTA
GGCAACTGCGAACCAGCGAAATCTTGGCAAATGATGTACTTATACACAGTGTTATATGTG
ACGGGGTTCGGAGCAGCAGGGATAAGGCCTTGTGTCTCATCATTCGGGGCTGATCAATTC
GATGAGAGAAGCAGAAACTACAGGTCACACCTGGACAGGTTTTTCAACTTTTTTTACCTG
TCGGTCACAGTTGGGGCGATTGTGGCCTTCACTGCAGTTGTGTATATTCAAATGAAACAT
GGATGGGGTGCTGCTTTTGGGTCATTGGCAATTGCCATGGGCCTGTCCAACATGTTATTC
TTTGCTGGCACCCCTATGTATAGGCATAGGTTGCCTGGAGGCAGTCCTCTCACGCGTGTT
GCCCAAGTCCTAGTTGCTGCCTTCCGCAAGAGGAATGTTTCGTTTCAAAGCAGCGAGTTA
GTAGGCTTGTATGAACTTCCTGGTAAAAGATCTGCTATCAAGGGCAGCAACAAGATACCT
CATACCGATGATTTCAGATGTTTGGACAAAGCAGCTCTGCAGCTAAAAGATGATGATGGT
GCCAATCCTTGGAGGCTTTGCACCGTGACTCAAGTAGAAGAAGTTAAAATCCTGCTGAAA
CTTCTTCCGATTCCAGCCTGCACTATAATGTTAAGTGTGGTTCTAACGGAGTATTTGACT
CTATCAGTCCAACAGGCATATACGTTGAACACTCACATGGGACATTTGAAACTTCCTGTC
ACCTGCATGCCGGTCTTTCCAGGCCTCAGCATATTTGTTCTGCTCTCCCTCTATTACTCC
GTGTTCGTTCCAATATCTAGGCGGATCACTGGCAACCCCCATGGTGCTTCTCAGCTTCAG
AGAGTTGGCATTGGCTTGGCAGTCTCTATACTCTCGGTGGCGTGGGCTGGTGTCTTCGAG
AGGTACCGGAGAACTTACGCAATACAACATGGTTACGAGGCTAGTTTTTTGACTCAAATG
CCTGACCTCAGTGCCTATTGGTTACTAATCCAGTATTGCCTAATTGGGATAGCTGAAGTT
TTTTGCATAGTGGGATTACTCGAATTTCTGTATGAGGAGGCTCCTGATGCAATGAGAAGC
ATTGGTTCAGCTTATGCTGCTGTGGCTGGTGGTCTTGGTTGTTTTGCAGCCACCATTTTG
AATAGCATTATCAAGTCTGTCACACGGGGAAAAGGCGAAACACGAGAATCCTGGCTTTCC
CAGAACATTAACACCGGCAGATTCGACTACTTCTATTGCCTCCTCACTGTCATGAGTCTC
ATCAATTTTGCTGCTTTTCTTTATGCAGCACATTGTTATCAGTACAGATCAAAGGATGGG
ACTGACAGACAAAGCGAGAAAGCGCCTGGATCCGATCATACCAGTACTAACACACCGGAT
CCTATTAGAACTCCGCAGTTAAGTGTGTTTGGACGAGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400048707
PEP Infomation

pacid=37467120 transcript=PGSC0003DMT400072037 locus=PGSC0003DMG400028026 ID=PGSC0003DMT400072037.v4.03 annot-version=v4.03
Sequence

MGSKEREIKSPEVQLGGNSTPKRGSKKLGIYFLESDDRRTAFGRGYSGGVGGATPVNIHG
KPIPDINKTGGWIAALFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFSSSANAVNNFLG
ISQASSVLGGFVADAYLGRYWTIAIFTTIYLAGLTGITLLATIKVFVPNQDQCDQIALLL
GNCEPAKSWQMMYLYTVLYVTGFGAAGIRPCVSSFGADQFDERSRNYRSHLDRFFNFFYL
SVTVGAIVAFTAVVYIQMKHGWGAAFGSLAIAMGLSNMLFFAGTPMYRHRLPGGSPLTRV
AQVLVAAFRKRNVSFQSSELVGLYELPGKRSAIKGSNKIPHTDDFRCLDKAALQLKDDDG
ANPWRLCTVTQVEEVKILLKLLPIPACTIMLSVVLTEYLTLSVQQAYTLNTHMGHLKLPV
TCMPVFPGLSIFVLLSLYYSVFVPISRRITGNPHGASQLQRVGIGLAVSILSVAWAGVFE
RYRRTYAIQHGYEASFLTQMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMRS
IGSAYAAVAGGLGCFAATILNSIIKSVTRGKGETRESWLSQNINTGRFDYFYCLLTVMSL
INFAAFLYAAHCYQYRSKDGTDRQSEKAPGSDHTSTNTPDPIRTPQLSVFGRE*

Transcript Sequence

Transcript ID

PGSC0003DMT400072037
Transcript Infomation

pacid=37467120 locus=PGSC0003DMG400028026 ID=PGSC0003DMT400072037.v4.03 annot-version=v4.03
Sequence

ATGGGAAGTAAAGAAAGGGAAATCAAATCACCTGAAGTTCAGTTAGGAGGGAATTCTACT
CCAAAACGGGGTTCAAAGAAACTCGGAATCTACTTCCTTGAATCGGATGATAGGAGAACA
GCTTTCGGACGTGGTTATAGTGGTGGAGTAGGAGGAGCTACTCCTGTGAATATCCATGGG
AAGCCTATTCCGGATATAAACAAGACGGGTGGCTGGATAGCTGCCTTGTTCATTTTCGGA
AATGAAATGGCTGAGAGAATGGCTTACTTTGGCCTATCTGTTAACATGGTGGCGTTCATG
TTCTACGTTATGCACAGGCCTTTTTCTAGCTCTGCCAATGCTGTTAACAATTTTTTGGGC
ATATCACAGGCTTCCTCTGTGTTGGGTGGTTTCGTTGCTGACGCTTACCTTGGTAGATAC
TGGACTATTGCGATCTTTACCACCATTTATCTTGCGGGATTAACAGGAATAACATTATTA
GCAACTATTAAGGTATTTGTGCCCAATCAAGATCAGTGTGATCAGATTGCCCTTCTTCTA
GGCAACTGCGAACCAGCGAAATCTTGGCAAATGATGTACTTATACACAGTGTTATATGTG
ACGGGGTTCGGAGCAGCAGGGATAAGGCCTTGTGTCTCATCATTCGGGGCTGATCAATTC
GATGAGAGAAGCAGAAACTACAGGTCACACCTGGACAGGTTTTTCAACTTTTTTTACCTG
TCGGTCACAGTTGGGGCGATTGTGGCCTTCACTGCAGTTGTGTATATTCAAATGAAACAT
GGATGGGGTGCTGCTTTTGGGTCATTGGCAATTGCCATGGGCCTGTCCAACATGTTATTC
TTTGCTGGCACCCCTATGTATAGGCATAGGTTGCCTGGAGGCAGTCCTCTCACGCGTGTT
GCCCAAGTCCTAGTTGCTGCCTTCCGCAAGAGGAATGTTTCGTTTCAAAGCAGCGAGTTA
GTAGGCTTGTATGAACTTCCTGGTAAAAGATCTGCTATCAAGGGCAGCAACAAGATACCT
CATACCGATGATTTCAGATGTTTGGACAAAGCAGCTCTGCAGCTAAAAGATGATGATGGT
GCCAATCCTTGGAGGCTTTGCACCGTGACTCAAGTAGAAGAAGTTAAAATCCTGCTGAAA
CTTCTTCCGATTCCAGCCTGCACTATAATGTTAAGTGTGGTTCTAACGGAGTATTTGACT
CTATCAGTCCAACAGGCATATACGTTGAACACTCACATGGGACATTTGAAACTTCCTGTC
ACCTGCATGCCGGTCTTTCCAGGCCTCAGCATATTTGTTCTGCTCTCCCTCTATTACTCC
GTGTTCGTTCCAATATCTAGGCGGATCACTGGCAACCCCCATGGTGCTTCTCAGCTTCAG
AGAGTTGGCATTGGCTTGGCAGTCTCTATACTCTCGGTGGCGTGGGCTGGTGTCTTCGAG
AGGTACCGGAGAACTTACGCAATACAACATGGTTACGAGGCTAGTTTTTTGACTCAAATG
CCTGACCTCAGTGCCTATTGGTTACTAATCCAGTATTGCCTAATTGGGATAGCTGAAGTT
TTTTGCATAGTGGGATTACTCGAATTTCTGTATGAGGAGGCTCCTGATGCAATGAGAAGC
ATTGGTTCAGCTTATGCTGCTGTGGCTGGTGGTCTTGGTTGTTTTGCAGCCACCATTTTG
AATAGCATTATCAAGTCTGTCACACGGGGAAAAGGCGAAACACGAGAATCCTGGCTTTCC
CAGAACATTAACACCGGCAGATTCGACTACTTCTATTGCCTCCTCACTGTCATGAGTCTC
ATCAATTTTGCTGCTTTTCTTTATGCAGCACATTGTTATCAGTACAGATCAAAGGATGGG
ACTGACAGACAAAGCGAGAAAGCGCCTGGATCCGATCATACCAGTACTAACACACCGGAT
CCTATTAGAACTCCGCAGTTAAGTGTGTTTGGACGAGAGTAG