Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072000
CDS Infomation

pacid=37455653 polypeptide=PGSC0003DMP400048683 locus=PGSC0003DMG400028012 ID=PGSC0003DMT400072000.v4.03 annot-version=v4.03
Sequence

ATGGTGAAGAAAAGCAAAAAGAGTAAGAGTAAGAGGGTGTCTTTGAAGCAGAAACATAAG
ATTATAAGGAAAGTGAAGGAGCACCATAAGAAGAAGGCCAAAGAGGCAAAAAAGCTTGGA
CTTAATAAGAAACCTAAGGTAGAGAAAGATCCAGGAATTCCTAATGACTGGCCTTTTAAG
GAGCAGGAACTCAAGGCTCTTGAGGCTCGTCGTGCTCGTGCTCTCGATGAGTTGGAGCAG
AAGAAAGCTGCCCGTAAAGAGAGGGCTAAGAAGAGAAAGCTTGGACTACTTGAGGATGAT
GATGTGTCCAAACTGGAAGATCTGACTTCAACGAAAGAAAAAGTTGGAGGAGGAAGGGTA
AATGATGGCTCAGCTTCTTTTGTTAAACAACGAGATAACTCTGAAAGGGCTTTCTACAAG
GAGTTGGTCAAAGTAATTGATGCTTCGGATGTAATTCTGGAAGTGCTTGATGCTCGAGAT
CCTCTTGGTACCCGCTGTCTTGACATGGAAAAGATGGTGATGAGAGCAGGACCTGAGAAA
CATCTTGTGTTACTCCTCAATAAAATTGATCTCATTCCTCGGGAAGCTGCAGAAAAGTGG
CTAAAGTATCTAAGAGAGGAATTACCAACGGTTGCTTTCAAGTGTAGCACCCAAGAACAG
AAGTCAAACCTGGGTTGGAAGCCTTCCTCAAAGGCTGGTAAGAGTAAGACTAGCAATCTT
CTGCAGACCAGTGATTGCCTTGGAGCCGAGACACTGATAAAATTGCTGAAGAATTACTCA
CGAAGCCATGAGATCAAGAAATCAATCACTGTAGGAGTCATTGGTCTACCAAATGTTGGT
AAAAGTAGCCTGATTAATAGCTTGAAGAGATCTCACGTAGTCAATGTAGGTGCTACTCCA
GGATTAACGAGATCCCTGCAAGAAGTCCAGTTAGATAAGAATGTTAAATTGCTGGACTGC
CCTGGGGTTGTGATGCTTAGGTCTGCATCTGAAGATGATGCATCTATTGCTCTTCGAAAT
TGCAAGAGGATAGAGAAGTTGGACGACCCAATTGGTCCTGTGAAGGAGATTCTCAAACTT
TGTCCAGAAAGAATGTTGGTTACCATATACAAGGTTCCTACCTTTGATTCCGTGGATGAT
TTTCTTCAGAAAGTTGCTATGGTTAGGGGTAAGCTCAAAAAGGGAGGAATTGTTGATGTT
GATGCTGCTGCAAGGATCGTTCTGCACGACTGGAATGAGGGGAAAATTCCATACTACACC
TTGCCCCCAACCAGGAACGAGGGGGAGCATTCAGAGGTCAAGATAGTTTCAGAACTTGGG
AAAGAATTCAATATCGATGAAGTTTATGGAAGTGAGTCCTCTATAATTGGAAGTCTGAAA
TCTGTCAACGATTTTAACCCAGTTGAAGTTCCATCAAATCGGCCTGTTAGCTTTGATGAT
AACATGCTCGAGGACAATTTGCAGCAGCCACTGGCTGAAAATGATAATGCCACAGAAAAC
CTTGTTAGTGAGAATGGAGATGAGCCAATGGATTCCGGAGAAGGAGATGGAGCCCAGACG
AGGGGCAAAAGTGCTAGTAGTAGACAGAATGAGAAGTTATACGGTGAGGAAGGCATGTTG
AACACTAAACAGAAGAAAGCTGAGAAGAAAAGGAGGAAGAAAGACAAGCCCTCAACTGCC
AGTGATATGGACGGCGATTATGACTTTAAGGTAGATTATATCAAGAAGGATTCTGCTATG
GATGATGCCAATGAAGTTGTAGCAACTGATGAAAGTAAGAACAACAGATTTGAGCTGCCA
TCTGGGGTTGAGTTGGATAATGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400048683
PEP Infomation

pacid=37455653 transcript=PGSC0003DMT400072000 locus=PGSC0003DMG400028012 ID=PGSC0003DMT400072000.v4.03 annot-version=v4.03
Sequence

MVKKSKKSKSKRVSLKQKHKIIRKVKEHHKKKAKEAKKLGLNKKPKVEKDPGIPNDWPFK
EQELKALEARRARALDELEQKKAARKERAKKRKLGLLEDDDVSKLEDLTSTKEKVGGGRV
NDGSASFVKQRDNSERAFYKELVKVIDASDVILEVLDARDPLGTRCLDMEKMVMRAGPEK
HLVLLLNKIDLIPREAAEKWLKYLREELPTVAFKCSTQEQKSNLGWKPSSKAGKSKTSNL
LQTSDCLGAETLIKLLKNYSRSHEIKKSITVGVIGLPNVGKSSLINSLKRSHVVNVGATP
GLTRSLQEVQLDKNVKLLDCPGVVMLRSASEDDASIALRNCKRIEKLDDPIGPVKEILKL
CPERMLVTIYKVPTFDSVDDFLQKVAMVRGKLKKGGIVDVDAAARIVLHDWNEGKIPYYT
LPPTRNEGEHSEVKIVSELGKEFNIDEVYGSESSIIGSLKSVNDFNPVEVPSNRPVSFDD
NMLEDNLQQPLAENDNATENLVSENGDEPMDSGEGDGAQTRGKSASSRQNEKLYGEEGML
NTKQKKAEKKRRKKDKPSTASDMDGDYDFKVDYIKKDSAMDDANEVVATDESKNNRFELP
SGVELDNE*

Transcript Sequence

Transcript ID

PGSC0003DMT400072000
Transcript Infomation

pacid=37455653 locus=PGSC0003DMG400028012 ID=PGSC0003DMT400072000.v4.03 annot-version=v4.03
Sequence

ATGGTGAAGAAAAGCAAAAAGAGTAAGAGTAAGAGGGTGTCTTTGAAGCAGAAACATAAG
ATTATAAGGAAAGTGAAGGAGCACCATAAGAAGAAGGCCAAAGAGGCAAAAAAGCTTGGA
CTTAATAAGAAACCTAAGGTAGAGAAAGATCCAGGAATTCCTAATGACTGGCCTTTTAAG
GAGCAGGAACTCAAGGCTCTTGAGGCTCGTCGTGCTCGTGCTCTCGATGAGTTGGAGCAG
AAGAAAGCTGCCCGTAAAGAGAGGGCTAAGAAGAGAAAGCTTGGACTACTTGAGGATGAT
GATGTGTCCAAACTGGAAGATCTGACTTCAACGAAAGAAAAAGTTGGAGGAGGAAGGGTA
AATGATGGCTCAGCTTCTTTTGTTAAACAACGAGATAACTCTGAAAGGGCTTTCTACAAG
GAGTTGGTCAAAGTAATTGATGCTTCGGATGTAATTCTGGAAGTGCTTGATGCTCGAGAT
CCTCTTGGTACCCGCTGTCTTGACATGGAAAAGATGGTGATGAGAGCAGGACCTGAGAAA
CATCTTGTGTTACTCCTCAATAAAATTGATCTCATTCCTCGGGAAGCTGCAGAAAAGTGG
CTAAAGTATCTAAGAGAGGAATTACCAACGGTTGCTTTCAAGTGTAGCACCCAAGAACAG
AAGTCAAACCTGGGTTGGAAGCCTTCCTCAAAGGCTGGTAAGAGTAAGACTAGCAATCTT
CTGCAGACCAGTGATTGCCTTGGAGCCGAGACACTGATAAAATTGCTGAAGAATTACTCA
CGAAGCCATGAGATCAAGAAATCAATCACTGTAGGAGTCATTGGTCTACCAAATGTTGGT
AAAAGTAGCCTGATTAATAGCTTGAAGAGATCTCACGTAGTCAATGTAGGTGCTACTCCA
GGATTAACGAGATCCCTGCAAGAAGTCCAGTTAGATAAGAATGTTAAATTGCTGGACTGC
CCTGGGGTTGTGATGCTTAGGTCTGCATCTGAAGATGATGCATCTATTGCTCTTCGAAAT
TGCAAGAGGATAGAGAAGTTGGACGACCCAATTGGTCCTGTGAAGGAGATTCTCAAACTT
TGTCCAGAAAGAATGTTGGTTACCATATACAAGGTTCCTACCTTTGATTCCGTGGATGAT
TTTCTTCAGAAAGTTGCTATGGTTAGGGGTAAGCTCAAAAAGGGAGGAATTGTTGATGTT
GATGCTGCTGCAAGGATCGTTCTGCACGACTGGAATGAGGGGAAAATTCCATACTACACC
TTGCCCCCAACCAGGAACGAGGGGGAGCATTCAGAGGTCAAGATAGTTTCAGAACTTGGG
AAAGAATTCAATATCGATGAAGTTTATGGAAGTGAGTCCTCTATAATTGGAAGTCTGAAA
TCTGTCAACGATTTTAACCCAGTTGAAGTTCCATCAAATCGGCCTGTTAGCTTTGATGAT
AACATGCTCGAGGACAATTTGCAGCAGCCACTGGCTGAAAATGATAATGCCACAGAAAAC
CTTGTTAGTGAGAATGGAGATGAGCCAATGGATTCCGGAGAAGGAGATGGAGCCCAGACG
AGGGGCAAAAGTGCTAGTAGTAGACAGAATGAGAAGTTATACGGTGAGGAAGGCATGTTG
AACACTAAACAGAAGAAAGCTGAGAAGAAAAGGAGGAAGAAAGACAAGCCCTCAACTGCC
AGTGATATGGACGGCGATTATGACTTTAAGGTAGATTATATCAAGAAGGATTCTGCTATG
GATGATGCCAATGAAGTTGTAGCAACTGATGAAAGTAAGAACAACAGATTTGAGCTGCCA
TCTGGGGTTGAGTTGGATAATGAATGA