Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071967
CDS Infomation

pacid=37476809 polypeptide=PGSC0003DMP400048660 locus=PGSC0003DMG400028001 ID=PGSC0003DMT400071967.v4.03 annot-version=v4.03
Sequence

ATGGCCGACCCTGTAATTGGTGCTACTGTTCAGGTTGTGCTTGAGAAGCTACTTTCTCTC
ACAATTGAGGAGGCCAGAAGTTTAAGGAACTGCAAGAAAAATCTCAGAATGCTGTCAAGA
TATGTAACCATGATCCAAGCTTTCATTCATGATGCTGAAAGACGACAAGTCGAAGATAAG
GCTGTGGAAGAATGGCTCAAGATGCTTGAGAGAATTGCTGAAGATGCTGAAAATGTGTTT
GACAAATTCACATATGAATCTATCAAAGCGAAAGTGATGAACAACCGAGCCAAACTAATG
GAAAAGGTCAGTCAATTCTTTTCTCATACTGCTTTCAAGTACAAAATGTCTCGAAAAATC
AATAAGATCAATGAAGAGTTGAGGGATATCAATCAGTTAGCTAACAACCTCGGTTTCCAA
TCACTGACGGTTCCTTCTCGGAAAATACTACTAATCCGAGAAACAGATTCTGCACTAGTT
CCTTCAGATGTTGTTGGTAGAGACAAAGATGTTGCTGTAATAAAGGAGAAGATTTTGAAC
ATGAGAAAGGATGCTGTTCTGTGCACCATTCCCATAGTCGGTATGGGGGGTTTAGGGAAA
ACTACTCTGGCTAAGAGGATTTTCAATGACCAACACATCGAGAAACACTTTGAAAAGAGA
ATTTGGTTGTGTCTACCTGAAATGTCTGAAATTAAGAGCTTTCTTGAACTGATCCTCGAA
TCATTGACAGAGAGGAAAGTTGAGGTCCAGAGCAGAGATATAATAGTCAAGAAGCTCCGA
GATGCATTGGGAGAAAAACAGTATTTGCTTGTCCTGGATGATTTGTGGCGTGTTGACTCT
ACTTCGTGGCACGAGTTCTTGGACACCTTGAGGGGAATAAATACATCCAGAGGAAACTGC
ATTCTCGTGACTACTCGTTCGAAGCAAGTGGCATCCATAGTAGCAGCAGATCTTCATAAG
TTGGGGAAATTAACAGATGATCATTGTTGGTCCATTTTCAAACAACGAGCATTTGTTGAT
GGGGAAGTTCCGGAGGAAATACTGAGTGTGGAGAACAAGATTGTTGAAATGTGTCAAGGT
CTACCTTTGGCTGCTAGTGTGTTGGGAGGCCTCTTTTGTAACAAGGAAAAACATGAATGG
CAGGCAATTCTTGATGGCAGCTCCCTTGTTGCATCTGAAGATAGCATTAAGAATATCCTA
AAACTCAGTTATGATTATCTACCATCTCCACATCTGAAGAAATGGTTTAGTTACTTTGCA
ATGTTTCCAAAAGATTTTGAGTTTGAAAAGGACCAACTAATCCAACTCTGGATGGCAGAA
GGGTTTCTTCGTCTATGTCAAGAGACCACTGTGATGGAAGACGTCGGGAACAAGTTTTTC
CAACTCTTGTTACAATATTCCTTGCTGCAGGATGTTAAGCTAGATGAGTACAACAATATA
ACACACTGTAAGATGCATGATCTTGTGCATGATTTGGCAGGAGATATTTTTAAGTCTAAA
CTATTTGATCAAAAGAGTGTCGGAGGAGAAAGTCTTTCTCAAGTTCGATACTTTGGATGG
GAATCACCAAGTGATCAAATAGATAAGATATATGAGCCAGGACGTTTGTGCACATTGTTC
TGGAAAAGCAATATATCTGATGATATGCTATTGAGCTTTCAGTTCTTGAGAGTTTTAAAT
TTGTCCAGGTCAGGCATCAAGGAGTTGTCAGCCTCAATCGTCAAGCTAATATACTTGAGA
TATCTTGATCTCTCCAATACTGAGATGAAAAACCTTCCCAACTCCATATGCAAGCTCTAC
AATTTGCAAACTTTGAGATTCTATAGCTGCTGGTGTCCACTCGGGAAACTTCCAGAAGAA
ATGGCAAATATGATAAGTTTGAGACACATATGTTGCTACCATTGTTTCGAATCAGATTCT
CAGATGCCACTTAATATGGGGCAATTGACTAGTCTTCAGACGCTACAGTTTTTCTATGTA
GGTTTAAAGAAAGGTCATCGAATAGAAGAACTGGGTTGTTTGAAAAATCTTAGAGGTGAA
TTGACGATCGAACGTCTACAATTAGTCGGAAATAAAGAAGAGGCTCGAACAACATATTTA
CAGGAGAAACCAAATATCTACAAACTGGTGTATTCGTGGTCCCATGATGAATCAGAAGGC
TGTGAGATCAATCATGAGCATGTGTTGGATGGTCTTCAACCACATCTGAACTTGAAAACC
TTAGAAGTTGTGGACTATTTAGGGACTAAATTTGCTTCATGGTTCAGTGAAAAAATGCTA
CCAAATTTGGTCATGTTGAGATTAAGTGGTTGCAAAAGGTGCAAAGAAATTCCATCACTT
GGCCAACTGAAATTCCTTCGGCATCTTGAGCTGGTAGGATTCCATGAGTTGGAATGCATT
GGACCTGCTTTATATGGTGTTGACATTAGCAATATTGGATCAAGCAGCATTATCCAAGTG
TTCCCGTCATTGAAAACACTAGTATTGGAGGATATGCGTAGCCTTATTGAGTGGAAGGGA
GATGAAGTTGGAGTAAGAATGTTTCCTAGGCTTGAGAAGTTGAGGATTAGGAACTGTCCA
TTGTTAAAAGGTACTCCGAATCAATTTGAAATCCTCCGTGAATTAGTAATTGTCAGAGTT
GACAGTGAAATGCCATTGTTGAACTTGTGCAGCAACTTGACATCTCTCATAGAGCTTGAA
GTCTATGATATGAAAGAGCTCACTTGTTTGCCAGATGAGATGCTACGCAACAATGTTTCT
CTTCAACACATATCGGTTTCCGACTGCAGAGAGTTTCATGAATTGCCACAAAGCTTGTAC
AATCTCCATTCTCTTAAGCTCTTAACGATTGATAACTGCACGAATTTCAGTTCTTTTCCT
GTTCCGAGTGAAGAGAATTATTTGACTTCCCTCCAAGATCTTCGGTTATTGGATTGTGAT
GGATTGAGCAGTTTACCAAGTGGAATGCTAGAGCATTGTCGGTCTCTGGAAACTTTGAGT
GTCAGCCGCTGTGACAATTTAGTTTCATTCCCTTTACATGTGGGGGAAATGCCTTCACTT
TCCTATTTGTATATATCACAATGTCCCAAATTGATTAGTTTACCCTCAGGGGGTATTCAC
CATCTCACTGAGTTAAGTGAACTGGAAATTGGTCCTTTCTCAGAGATGGTGGATTTTGAG
GCATTCCAATTGATTTTTAATGGCATTCAGCAGCTGCTGTCCCTTCGTACATTGTGGGTG
TATGGACATGGTCACTGGGATTCTCTGCCCTATCAGTTTATGCAACTCTCTGACTTAACA
AAGATTCAAATATATGGATTCGGAATCGAGGCTCTTCCTCATAGATTTTGCAACCTTACT
TCTCTTGGAACGTTAAGGTTAGTGAGGTGCAAACGGCTACAGAACCTGGACTTCTCATAT
GTCATGCCCAAATTACAATATCTGTGTGTAGAGGAATGTCCATTGTTAGAAGCTCTGTCG
GATGGGCTTGGCAACCTTGTTTTTTTGGGACATTTACATTTAGTAAACTGTGAGAAACTA
GAGCATTTGCCATCGAGAGATGCCATGCAACGCCTCACCAAATTATGGAACCTGGGAATT
AAAGGCTGCCCAAAGTTAGAAGAAAGTTGCACCAATCGGAGTGGCCCAAACTCCCAGTGG
TCCAACATTTCCCATATTCAAAAAATTGAAGTTGGTGGAAGCACAATTCAGGACTTGCGT
TATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400048660
PEP Infomation

pacid=37476809 transcript=PGSC0003DMT400071967 locus=PGSC0003DMG400028001 ID=PGSC0003DMT400071967.v4.03 annot-version=v4.03
Sequence

MADPVIGATVQVVLEKLLSLTIEEARSLRNCKKNLRMLSRYVTMIQAFIHDAERRQVEDK
AVEEWLKMLERIAEDAENVFDKFTYESIKAKVMNNRAKLMEKVSQFFSHTAFKYKMSRKI
NKINEELRDINQLANNLGFQSLTVPSRKILLIRETDSALVPSDVVGRDKDVAVIKEKILN
MRKDAVLCTIPIVGMGGLGKTTLAKRIFNDQHIEKHFEKRIWLCLPEMSEIKSFLELILE
SLTERKVEVQSRDIIVKKLRDALGEKQYLLVLDDLWRVDSTSWHEFLDTLRGINTSRGNC
ILVTTRSKQVASIVAADLHKLGKLTDDHCWSIFKQRAFVDGEVPEEILSVENKIVEMCQG
LPLAASVLGGLFCNKEKHEWQAILDGSSLVASEDSIKNILKLSYDYLPSPHLKKWFSYFA
MFPKDFEFEKDQLIQLWMAEGFLRLCQETTVMEDVGNKFFQLLLQYSLLQDVKLDEYNNI
THCKMHDLVHDLAGDIFKSKLFDQKSVGGESLSQVRYFGWESPSDQIDKIYEPGRLCTLF
WKSNISDDMLLSFQFLRVLNLSRSGIKELSASIVKLIYLRYLDLSNTEMKNLPNSICKLY
NLQTLRFYSCWCPLGKLPEEMANMISLRHICCYHCFESDSQMPLNMGQLTSLQTLQFFYV
GLKKGHRIEELGCLKNLRGELTIERLQLVGNKEEARTTYLQEKPNIYKLVYSWSHDESEG
CEINHEHVLDGLQPHLNLKTLEVVDYLGTKFASWFSEKMLPNLVMLRLSGCKRCKEIPSL
GQLKFLRHLELVGFHELECIGPALYGVDISNIGSSSIIQVFPSLKTLVLEDMRSLIEWKG
DEVGVRMFPRLEKLRIRNCPLLKGTPNQFEILRELVIVRVDSEMPLLNLCSNLTSLIELE
VYDMKELTCLPDEMLRNNVSLQHISVSDCREFHELPQSLYNLHSLKLLTIDNCTNFSSFP
VPSEENYLTSLQDLRLLDCDGLSSLPSGMLEHCRSLETLSVSRCDNLVSFPLHVGEMPSL
SYLYISQCPKLISLPSGGIHHLTELSELEIGPFSEMVDFEAFQLIFNGIQQLLSLRTLWV
YGHGHWDSLPYQFMQLSDLTKIQIYGFGIEALPHRFCNLTSLGTLRLVRCKRLQNLDFSY
VMPKLQYLCVEECPLLEALSDGLGNLVFLGHLHLVNCEKLEHLPSRDAMQRLTKLWNLGI
KGCPKLEESCTNRSGPNSQWSNISHIQKIEVGGSTIQDLRY*

Transcript Sequence

Transcript ID

PGSC0003DMT400071967
Transcript Infomation

pacid=37476809 locus=PGSC0003DMG400028001 ID=PGSC0003DMT400071967.v4.03 annot-version=v4.03
Sequence

ATGGCCGACCCTGTAATTGGTGCTACTGTTCAGGTTGTGCTTGAGAAGCTACTTTCTCTC
ACAATTGAGGAGGCCAGAAGTTTAAGGAACTGCAAGAAAAATCTCAGAATGCTGTCAAGA
TATGTAACCATGATCCAAGCTTTCATTCATGATGCTGAAAGACGACAAGTCGAAGATAAG
GCTGTGGAAGAATGGCTCAAGATGCTTGAGAGAATTGCTGAAGATGCTGAAAATGTGTTT
GACAAATTCACATATGAATCTATCAAAGCGAAAGTGATGAACAACCGAGCCAAACTAATG
GAAAAGGTCAGTCAATTCTTTTCTCATACTGCTTTCAAGTACAAAATGTCTCGAAAAATC
AATAAGATCAATGAAGAGTTGAGGGATATCAATCAGTTAGCTAACAACCTCGGTTTCCAA
TCACTGACGGTTCCTTCTCGGAAAATACTACTAATCCGAGAAACAGATTCTGCACTAGTT
CCTTCAGATGTTGTTGGTAGAGACAAAGATGTTGCTGTAATAAAGGAGAAGATTTTGAAC
ATGAGAAAGGATGCTGTTCTGTGCACCATTCCCATAGTCGGTATGGGGGGTTTAGGGAAA
ACTACTCTGGCTAAGAGGATTTTCAATGACCAACACATCGAGAAACACTTTGAAAAGAGA
ATTTGGTTGTGTCTACCTGAAATGTCTGAAATTAAGAGCTTTCTTGAACTGATCCTCGAA
TCATTGACAGAGAGGAAAGTTGAGGTCCAGAGCAGAGATATAATAGTCAAGAAGCTCCGA
GATGCATTGGGAGAAAAACAGTATTTGCTTGTCCTGGATGATTTGTGGCGTGTTGACTCT
ACTTCGTGGCACGAGTTCTTGGACACCTTGAGGGGAATAAATACATCCAGAGGAAACTGC
ATTCTCGTGACTACTCGTTCGAAGCAAGTGGCATCCATAGTAGCAGCAGATCTTCATAAG
TTGGGGAAATTAACAGATGATCATTGTTGGTCCATTTTCAAACAACGAGCATTTGTTGAT
GGGGAAGTTCCGGAGGAAATACTGAGTGTGGAGAACAAGATTGTTGAAATGTGTCAAGGT
CTACCTTTGGCTGCTAGTGTGTTGGGAGGCCTCTTTTGTAACAAGGAAAAACATGAATGG
CAGGCAATTCTTGATGGCAGCTCCCTTGTTGCATCTGAAGATAGCATTAAGAATATCCTA
AAACTCAGTTATGATTATCTACCATCTCCACATCTGAAGAAATGGTTTAGTTACTTTGCA
ATGTTTCCAAAAGATTTTGAGTTTGAAAAGGACCAACTAATCCAACTCTGGATGGCAGAA
GGGTTTCTTCGTCTATGTCAAGAGACCACTGTGATGGAAGACGTCGGGAACAAGTTTTTC
CAACTCTTGTTACAATATTCCTTGCTGCAGGATGTTAAGCTAGATGAGTACAACAATATA
ACACACTGTAAGATGCATGATCTTGTGCATGATTTGGCAGGAGATATTTTTAAGTCTAAA
CTATTTGATCAAAAGAGTGTCGGAGGAGAAAGTCTTTCTCAAGTTCGATACTTTGGATGG
GAATCACCAAGTGATCAAATAGATAAGATATATGAGCCAGGACGTTTGTGCACATTGTTC
TGGAAAAGCAATATATCTGATGATATGCTATTGAGCTTTCAGTTCTTGAGAGTTTTAAAT
TTGTCCAGGTCAGGCATCAAGGAGTTGTCAGCCTCAATCGTCAAGCTAATATACTTGAGA
TATCTTGATCTCTCCAATACTGAGATGAAAAACCTTCCCAACTCCATATGCAAGCTCTAC
AATTTGCAAACTTTGAGATTCTATAGCTGCTGGTGTCCACTCGGGAAACTTCCAGAAGAA
ATGGCAAATATGATAAGTTTGAGACACATATGTTGCTACCATTGTTTCGAATCAGATTCT
CAGATGCCACTTAATATGGGGCAATTGACTAGTCTTCAGACGCTACAGTTTTTCTATGTA
GGTTTAAAGAAAGGTCATCGAATAGAAGAACTGGGTTGTTTGAAAAATCTTAGAGGTGAA
TTGACGATCGAACGTCTACAATTAGTCGGAAATAAAGAAGAGGCTCGAACAACATATTTA
CAGGAGAAACCAAATATCTACAAACTGGTGTATTCGTGGTCCCATGATGAATCAGAAGGC
TGTGAGATCAATCATGAGCATGTGTTGGATGGTCTTCAACCACATCTGAACTTGAAAACC
TTAGAAGTTGTGGACTATTTAGGGACTAAATTTGCTTCATGGTTCAGTGAAAAAATGCTA
CCAAATTTGGTCATGTTGAGATTAAGTGGTTGCAAAAGGTGCAAAGAAATTCCATCACTT
GGCCAACTGAAATTCCTTCGGCATCTTGAGCTGGTAGGATTCCATGAGTTGGAATGCATT
GGACCTGCTTTATATGGTGTTGACATTAGCAATATTGGATCAAGCAGCATTATCCAAGTG
TTCCCGTCATTGAAAACACTAGTATTGGAGGATATGCGTAGCCTTATTGAGTGGAAGGGA
GATGAAGTTGGAGTAAGAATGTTTCCTAGGCTTGAGAAGTTGAGGATTAGGAACTGTCCA
TTGTTAAAAGGTACTCCGAATCAATTTGAAATCCTCCGTGAATTAGTAATTGTCAGAGTT
GACAGTGAAATGCCATTGTTGAACTTGTGCAGCAACTTGACATCTCTCATAGAGCTTGAA
GTCTATGATATGAAAGAGCTCACTTGTTTGCCAGATGAGATGCTACGCAACAATGTTTCT
CTTCAACACATATCGGTTTCCGACTGCAGAGAGTTTCATGAATTGCCACAAAGCTTGTAC
AATCTCCATTCTCTTAAGCTCTTAACGATTGATAACTGCACGAATTTCAGTTCTTTTCCT
GTTCCGAGTGAAGAGAATTATTTGACTTCCCTCCAAGATCTTCGGTTATTGGATTGTGAT
GGATTGAGCAGTTTACCAAGTGGAATGCTAGAGCATTGTCGGTCTCTGGAAACTTTGAGT
GTCAGCCGCTGTGACAATTTAGTTTCATTCCCTTTACATGTGGGGGAAATGCCTTCACTT
TCCTATTTGTATATATCACAATGTCCCAAATTGATTAGTTTACCCTCAGGGGGTATTCAC
CATCTCACTGAGTTAAGTGAACTGGAAATTGGTCCTTTCTCAGAGATGGTGGATTTTGAG
GCATTCCAATTGATTTTTAATGGCATTCAGCAGCTGCTGTCCCTTCGTACATTGTGGGTG
TATGGACATGGTCACTGGGATTCTCTGCCCTATCAGTTTATGCAACTCTCTGACTTAACA
AAGATTCAAATATATGGATTCGGAATCGAGGCTCTTCCTCATAGATTTTGCAACCTTACT
TCTCTTGGAACGTTAAGGTTAGTGAGGTGCAAACGGCTACAGAACCTGGACTTCTCATAT
GTCATGCCCAAATTACAATATCTGTGTGTAGAGGAATGTCCATTGTTAGAAGCTCTGTCG
GATGGGCTTGGCAACCTTGTTTTTTTGGGACATTTACATTTAGTAAACTGTGAGAAACTA
GAGCATTTGCCATCGAGAGATGCCATGCAACGCCTCACCAAATTATGGAACCTGGGAATT
AAAGGCTGCCCAAAGTTAGAAGAAAGTTGCACCAATCGGAGTGGCCCAAACTCCCAGTGG
TCCAACATTTCCCATATTCAAAAAATTGAAGTTGGTGGAAGCACAATTCAGGACTTGCGT
TATTAG