Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071849
CDS Infomation

pacid=37434307 polypeptide=PGSC0003DMP400048596 locus=PGSC0003DMG400027954 ID=PGSC0003DMT400071849.v4.03 annot-version=v4.03
Sequence

ATGGTAGACGGAGGAGGATGTTGTCCGACGATGGATCTTTTACGATCTGAACCAATGCAG
TTGGTGCAATTGATTATCCCGTTGGAATCAGCTCATCGTACAGTTTCTTACCTCGGTGAC
CTTGGTCTCTTCCAATTCAAAGACCTTAATGTGGAAAAGAGCCCATTCCAGCGAACATAT
GCAACCCAGATTAAAAGATGTGGAGAAATGGCACGTAAACTTCGCTTTTTAAAGGAACAA
ATGACGAAGGCAGGGATTACTCCTTCAACAAGGACCACAATGTGCCAAAATATAAATCTG
GATGAATTGGAGGTCAAACTTGGTGAACTCGAAGCTGATTTAGCAGAGATGAATACTAAT
ACTGAAAAGCTTCAACGTTCTTACAATGAGCTTCTCGAGTATAAGCTTGTTCTGCAGAAG
GCTGGTGAGTTCTTCCATTCAGCTCAAAACAGTGCTACAGCTCAACAGAAAGAACTGGAG
GAGCACATGCATAGCGAGAGATCAATTGATAGTCCTCTGTTGTTAGAGCAGGAAGCCTTT
GCTGATCCTTCAAAACAAGTTAAGCTGGGATTTGTCAGTGGGCTTGTTGCTAGAGAGAAA
TCTATGGCTTTTGAAAGGTTTCTTTTTCGTGCAACCAGAGGAAATGTATTTTTAAAGCAA
GTGGTTGTGAAAAATCCTGTGACGGATCCATTGTCAGGCAGCGAGGTTGAAAAAAATGTG
TTTGTTATCTTTTACTCTGGAGAAAGGACGAAGAACAAGATATTAAAAATTTGCGATGCA
TTTGGAGCAAATCGGTATCCATTCACTGATGACATAGGCAGACAGTTTGAGATGATAACG
GAGGTATCTGGAAAACTTTCAGAGTTGAAGACCACCGTAGACATCGGACAGCTACACCGG
GCAAATCTCTTACAGACCATTGGTTATGAATTTGACCAATGGAACCTTCTGGTGAAGCAG
GAGAAGTTCATTTTCCATACACTAAATATGCTCAGTTTTGATGTGACAAAGAAGTGCCTT
GTGGGTGAGGGCTGGTGTCCAGTTTATGCCACCAGCCAGATACAAAATGCATTGCATCGA
GCAACTTTGGATGGTAACTCACAAGTTGGGGCCATATTCCAGGTCTTGCATACCACAGAA
TTGCCACCTACATATTTCCGTACAAACAAATTTACATCTGCCTTCCAAGAAATTGTTGAT
GCATATGGGATTGCAAAATATCAGGAAGTTAACCCTGCTGTTTTCACAGTAGTAACTTTC
CCATTCCTCTTTGCTGTCATGTTTGGAGACTGGGGACATGGTATATGCTTGTTTCTTGCG
ACATTATATTTCATCTTACAGGAGAGGAAGCTCTCTGGTCAGAAGCTTGGCGACATCATG
GAGATGACTTTTGGCGGTCGCTACATTATTATGATGATGGCTCTGTTTTCAATATATACA
GGATTCATATATAACGAATTTTTTTCTGTCCCCTTTGAAATATTTGGGCAATCAGCTTAT
GGTTGTCACGATCCTTCCTGCAGGGATGCCACTATAACAGGTTTGATCAAGGTCCGCGAT
GCCTATCCATTTGGTGTGGATCCTAAGTGGCATGGTTCACGCAGCGAATTACCATTTCTG
AATTCTTTGAAGATGAAGATGTCAATTCTACTAGGTGTAGCTCAGATGAATCTTGGAATC
ATTTTAAGCTATTTCAACGCAAAGTTTTTTCAAAATAACGTGAATGTCTGGCATCAGTTT
GTCCCCCAGATAATATTTCTGAACAGCCTCTTTGGCTATCTTTCACTTCTTATTATTGTC
AAATGGTGCACTGGTTCTCAAGCTGATCTGTACCACGTAATGATATACATGTTTCTAAGC
CCTACTGATGATTTGGGCGAGAACCAGCTTTTTCCTGGGCAAAAATACCTCCAGCTTTTG
TTCGTATCACTTGCACTTGTTGCCGTTCCATGGATGTTATTTCCAAAGCCATTTCTTCTA
AAGAAACAACACGAGGAAAGGCATCGAGGTCAATTGTATGCAATGCTTGAAAGCACTGAT
GACTCGTTTGAGTTGGAGACACACGATCATTCACATGGACATGAAGAATTTGATTTCAGT
GAAGTTTTTGTACATCAGCTCATACATACAATAGAATTTGTACTTGGAGCAGTCTCTAAT
ACAGCTTCATACCTGCGTCTATGGGCCCTCAGTTTGGCACATTCAGAACTGTCAAGTGTG
TTCTATGACAAAGTTCTGCTTCTCGCAATGGGGTACAATAATCTCATCATACTTATCATT
GGCATAGTGGTATTTATATTTGCTACTGTCGGTGTGCTACTTGTGATGGAAACTCTAAGT
GCATTCTTACATGCTTTGCGTCTTCATTGGGTAGAATTCCAGAACAAGTTCTATGAGGGA
GACGGATACAAGTTTTCCCCATTCTCGTTTTGTTTGATTAGTGAGGATGATGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048596
PEP Infomation

pacid=37434307 transcript=PGSC0003DMT400071849 locus=PGSC0003DMG400027954 ID=PGSC0003DMT400071849.v4.03 annot-version=v4.03
Sequence

MVDGGGCCPTMDLLRSEPMQLVQLIIPLESAHRTVSYLGDLGLFQFKDLNVEKSPFQRTY
ATQIKRCGEMARKLRFLKEQMTKAGITPSTRTTMCQNINLDELEVKLGELEADLAEMNTN
TEKLQRSYNELLEYKLVLQKAGEFFHSAQNSATAQQKELEEHMHSERSIDSPLLLEQEAF
ADPSKQVKLGFVSGLVAREKSMAFERFLFRATRGNVFLKQVVVKNPVTDPLSGSEVEKNV
FVIFYSGERTKNKILKICDAFGANRYPFTDDIGRQFEMITEVSGKLSELKTTVDIGQLHR
ANLLQTIGYEFDQWNLLVKQEKFIFHTLNMLSFDVTKKCLVGEGWCPVYATSQIQNALHR
ATLDGNSQVGAIFQVLHTTELPPTYFRTNKFTSAFQEIVDAYGIAKYQEVNPAVFTVVTF
PFLFAVMFGDWGHGICLFLATLYFILQERKLSGQKLGDIMEMTFGGRYIIMMMALFSIYT
GFIYNEFFSVPFEIFGQSAYGCHDPSCRDATITGLIKVRDAYPFGVDPKWHGSRSELPFL
NSLKMKMSILLGVAQMNLGIILSYFNAKFFQNNVNVWHQFVPQIIFLNSLFGYLSLLIIV
KWCTGSQADLYHVMIYMFLSPTDDLGENQLFPGQKYLQLLFVSLALVAVPWMLFPKPFLL
KKQHEERHRGQLYAMLESTDDSFELETHDHSHGHEEFDFSEVFVHQLIHTIEFVLGAVSN
TASYLRLWALSLAHSELSSVFYDKVLLLAMGYNNLIILIIGIVVFIFATVGVLLVMETLS
AFLHALRLHWVEFQNKFYEGDGYKFSPFSFCLISEDDD*

Transcript Sequence

Transcript ID

PGSC0003DMT400071849
Transcript Infomation

pacid=37434307 locus=PGSC0003DMG400027954 ID=PGSC0003DMT400071849.v4.03 annot-version=v4.03
Sequence

ATGGTAGACGGAGGAGGATGTTGTCCGACGATGGATCTTTTACGATCTGAACCAATGCAG
TTGGTGCAATTGATTATCCCGTTGGAATCAGCTCATCGTACAGTTTCTTACCTCGGTGAC
CTTGGTCTCTTCCAATTCAAAGACCTTAATGTGGAAAAGAGCCCATTCCAGCGAACATAT
GCAACCCAGATTAAAAGATGTGGAGAAATGGCACGTAAACTTCGCTTTTTAAAGGAACAA
ATGACGAAGGCAGGGATTACTCCTTCAACAAGGACCACAATGTGCCAAAATATAAATCTG
GATGAATTGGAGGTCAAACTTGGTGAACTCGAAGCTGATTTAGCAGAGATGAATACTAAT
ACTGAAAAGCTTCAACGTTCTTACAATGAGCTTCTCGAGTATAAGCTTGTTCTGCAGAAG
GCTGGTGAGTTCTTCCATTCAGCTCAAAACAGTGCTACAGCTCAACAGAAAGAACTGGAG
GAGCACATGCATAGCGAGAGATCAATTGATAGTCCTCTGTTGTTAGAGCAGGAAGCCTTT
GCTGATCCTTCAAAACAAGTTAAGCTGGGATTTGTCAGTGGGCTTGTTGCTAGAGAGAAA
TCTATGGCTTTTGAAAGGTTTCTTTTTCGTGCAACCAGAGGAAATGTATTTTTAAAGCAA
GTGGTTGTGAAAAATCCTGTGACGGATCCATTGTCAGGCAGCGAGGTTGAAAAAAATGTG
TTTGTTATCTTTTACTCTGGAGAAAGGACGAAGAACAAGATATTAAAAATTTGCGATGCA
TTTGGAGCAAATCGGTATCCATTCACTGATGACATAGGCAGACAGTTTGAGATGATAACG
GAGGTATCTGGAAAACTTTCAGAGTTGAAGACCACCGTAGACATCGGACAGCTACACCGG
GCAAATCTCTTACAGACCATTGGTTATGAATTTGACCAATGGAACCTTCTGGTGAAGCAG
GAGAAGTTCATTTTCCATACACTAAATATGCTCAGTTTTGATGTGACAAAGAAGTGCCTT
GTGGGTGAGGGCTGGTGTCCAGTTTATGCCACCAGCCAGATACAAAATGCATTGCATCGA
GCAACTTTGGATGGTAACTCACAAGTTGGGGCCATATTCCAGGTCTTGCATACCACAGAA
TTGCCACCTACATATTTCCGTACAAACAAATTTACATCTGCCTTCCAAGAAATTGTTGAT
GCATATGGGATTGCAAAATATCAGGAAGTTAACCCTGCTGTTTTCACAGTAGTAACTTTC
CCATTCCTCTTTGCTGTCATGTTTGGAGACTGGGGACATGGTATATGCTTGTTTCTTGCG
ACATTATATTTCATCTTACAGGAGAGGAAGCTCTCTGGTCAGAAGCTTGGCGACATCATG
GAGATGACTTTTGGCGGTCGCTACATTATTATGATGATGGCTCTGTTTTCAATATATACA
GGATTCATATATAACGAATTTTTTTCTGTCCCCTTTGAAATATTTGGGCAATCAGCTTAT
GGTTGTCACGATCCTTCCTGCAGGGATGCCACTATAACAGGTTTGATCAAGGTCCGCGAT
GCCTATCCATTTGGTGTGGATCCTAAGTGGCATGGTTCACGCAGCGAATTACCATTTCTG
AATTCTTTGAAGATGAAGATGTCAATTCTACTAGGTGTAGCTCAGATGAATCTTGGAATC
ATTTTAAGCTATTTCAACGCAAAGTTTTTTCAAAATAACGTGAATGTCTGGCATCAGTTT
GTCCCCCAGATAATATTTCTGAACAGCCTCTTTGGCTATCTTTCACTTCTTATTATTGTC
AAATGGTGCACTGGTTCTCAAGCTGATCTGTACCACGTAATGATATACATGTTTCTAAGC
CCTACTGATGATTTGGGCGAGAACCAGCTTTTTCCTGGGCAAAAATACCTCCAGCTTTTG
TTCGTATCACTTGCACTTGTTGCCGTTCCATGGATGTTATTTCCAAAGCCATTTCTTCTA
AAGAAACAACACGAGGAAAGGCATCGAGGTCAATTGTATGCAATGCTTGAAAGCACTGAT
GACTCGTTTGAGTTGGAGACACACGATCATTCACATGGACATGAAGAATTTGATTTCAGT
GAAGTTTTTGTACATCAGCTCATACATACAATAGAATTTGTACTTGGAGCAGTCTCTAAT
ACAGCTTCATACCTGCGTCTATGGGCCCTCAGTTTGGCACATTCAGAACTGTCAAGTGTG
TTCTATGACAAAGTTCTGCTTCTCGCAATGGGGTACAATAATCTCATCATACTTATCATT
GGCATAGTGGTATTTATATTTGCTACTGTCGGTGTGCTACTTGTGATGGAAACTCTAAGT
GCATTCTTACATGCTTTGCGTCTTCATTGGGTAGAATTCCAGAACAAGTTCTATGAGGGA
GACGGATACAAGTTTTCCCCATTCTCGTTTTGTTTGATTAGTGAGGATGATGATTAA