Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071835
CDS Infomation

pacid=37457453 polypeptide=PGSC0003DMP400048586 locus=PGSC0003DMG400027948 ID=PGSC0003DMT400071835.v4.03 annot-version=v4.03
Sequence

ATGGAGGTTGCCGCGCAACACAACTGGATGGCGGAGGAGACGGTGGAGGACACGCTCATC
ATACGTGAAGCTCGACGCTCAGCCAACGTTGATCGTGGTGTTGTTAATGAAGATGAAGTA
TCGTCTAGCAGTGATGAGGAAGAGGCGAGCAAGGACAAGCTTAAAAATAGCGTCTACTTT
AATGAAGTAATTGACGCTGTAGACTTTCACGTTGTTCTCAATGGTGATCATCACACGGGA
AATGCTAATGGACAAATAAATGAGACAGGAAATCCCAAGGGTGAAATTCTTTCTACTGTA
TGTGTTCCACTTTTACATGGACAAAATTCACCCGTTGAGACGGGAAATCCTAAGGGTGAA
ATTATTTTGGACGTATGTGTTCCACTTTTACATGGACAAAATTTACTCGATGAGACGGAA
AATCAAATTCTTTCTGGTGTATGTCAGCCACTTTTATATGGACAAAATTTACTTGATGAG
ACGGAAAATCCTAAGGGTGTATGTGGACAAAATTCACTCGATGAGACGGGAAAATATGGT
AAGGGAGAAATTCTTCCTGGTGTATGGCTTCCACCTAATTCACAAGGACATGATTCACAA
TCAAGTTCTTCAATCAGAAAAGGAAGTGGAAATGAAACAATCATTGAACAAGTTGAGGAA
GAAACTGTTGAGTTGGAGTTCTTTGACACAACAGCAGTTGATAAGCTAAAACACACTCAT
AATGCATACTGTCCAAAGTGTAACTCTCGTATAACTAAAGTTGTCCTTCGAAGGGTAAAA
CGAGAAAGAAGGATTATAATAGAAACTGATGATGATCGTCATGACCAAAAATCGGAGCTA
CTTGGATGCCTCTCATGCTTCAGTGTTTTCGTACGTATAGGAAAGAAGCTCAATCCATTC
CCGATATTTGGAAATGGAGGAGGAACTACTAGTACAGAAATAGCTGGAGAATCACATCTC
CCAAACACAGATGAAGGTGGCTTCATTCCAGGGATAATGCCTCCCAAGAAATCACCAGCT
GAAATTATAGAGAGTAAAGGAGATGATTACCGAATTCCTATATTGGAAGACCCAAGAGCT
TCTCCATCAACAGGGCATTCCAGCAACCCACAAAGACCAATACTTCCAGTTGAAGTTAAA
GATTCCAGATCACTGGAGATTGTAAAATGCATAGTATATGGAGGTTTAATAGAGGCAATC
ACAAGCTTGGGAGTGGTCTCCTCTGCAGCTGCATCTGATGCTGACACAATGAAGATTGTT
ACTATTGGAGTGGCAAATTTGATAGGTGGACTTTTTGTCATTTGTCAAAATTTGGTGGAC
TTGAAATATAGTGTTGGAGGAGGTTCCAATTACCAAGTAGATCGATACGGTGAACTACTT
GGCCAAAGAAAAAATTTCCCCCTTCATGCTACTTTTGCCATGTTGTCATATTTTGTGTTT
GGACTTATCCCCCCTGTAATATATGGCTTCACATTTCGGAAGAGTGATGACAGGGACTAC
AAGCTTATAGCAGTTGCCGCGGCTTCTCTTCTGTGTGTTATCATACTTGCTGCTGCAAAG
GCTTATACACAAAGAGCAAATAAGTTCAGTAAATACTTCAAGACTATTTTGTCTTATGTT
ATAGCTGCAGGTATGGTCTCAGGTGTTGGTTATGCAGCAGGTCATCTGATTAAGAGGCTC
ATGGATGACATGGGATGGTTTGACTCAAAGCCGATTTCACAGAATCCAGCCTGGGCATCC
TATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400048586
PEP Infomation

pacid=37457453 transcript=PGSC0003DMT400071835 locus=PGSC0003DMG400027948 ID=PGSC0003DMT400071835.v4.03 annot-version=v4.03
Sequence

MEVAAQHNWMAEETVEDTLIIREARRSANVDRGVVNEDEVSSSSDEEEASKDKLKNSVYF
NEVIDAVDFHVVLNGDHHTGNANGQINETGNPKGEILSTVCVPLLHGQNSPVETGNPKGE
IILDVCVPLLHGQNLLDETENQILSGVCQPLLYGQNLLDETENPKGVCGQNSLDETGKYG
KGEILPGVWLPPNSQGHDSQSSSSIRKGSGNETIIEQVEEETVELEFFDTTAVDKLKHTH
NAYCPKCNSRITKVVLRRVKRERRIIIETDDDRHDQKSELLGCLSCFSVFVRIGKKLNPF
PIFGNGGGTTSTEIAGESHLPNTDEGGFIPGIMPPKKSPAEIIESKGDDYRIPILEDPRA
SPSTGHSSNPQRPILPVEVKDSRSLEIVKCIVYGGLIEAITSLGVVSSAAASDADTMKIV
TIGVANLIGGLFVICQNLVDLKYSVGGGSNYQVDRYGELLGQRKNFPLHATFAMLSYFVF
GLIPPVIYGFTFRKSDDRDYKLIAVAAASLLCVIILAAAKAYTQRANKFSKYFKTILSYV
IAAGMVSGVGYAAGHLIKRLMDDMGWFDSKPISQNPAWASY*

Transcript Sequence

Transcript ID

PGSC0003DMT400071835
Transcript Infomation

pacid=37457453 locus=PGSC0003DMG400027948 ID=PGSC0003DMT400071835.v4.03 annot-version=v4.03
Sequence

ATGGAGGTTGCCGCGCAACACAACTGGATGGCGGAGGAGACGGTGGAGGACACGCTCATC
ATACGTGAAGCTCGACGCTCAGCCAACGTTGATCGTGGTGTTGTTAATGAAGATGAAGTA
TCGTCTAGCAGTGATGAGGAAGAGGCGAGCAAGGACAAGCTTAAAAATAGCGTCTACTTT
AATGAAGTAATTGACGCTGTAGACTTTCACGTTGTTCTCAATGGTGATCATCACACGGGA
AATGCTAATGGACAAATAAATGAGACAGGAAATCCCAAGGGTGAAATTCTTTCTACTGTA
TGTGTTCCACTTTTACATGGACAAAATTCACCCGTTGAGACGGGAAATCCTAAGGGTGAA
ATTATTTTGGACGTATGTGTTCCACTTTTACATGGACAAAATTTACTCGATGAGACGGAA
AATCAAATTCTTTCTGGTGTATGTCAGCCACTTTTATATGGACAAAATTTACTTGATGAG
ACGGAAAATCCTAAGGGTGTATGTGGACAAAATTCACTCGATGAGACGGGAAAATATGGT
AAGGGAGAAATTCTTCCTGGTGTATGGCTTCCACCTAATTCACAAGGACATGATTCACAA
TCAAGTTCTTCAATCAGAAAAGGAAGTGGAAATGAAACAATCATTGAACAAGTTGAGGAA
GAAACTGTTGAGTTGGAGTTCTTTGACACAACAGCAGTTGATAAGCTAAAACACACTCAT
AATGCATACTGTCCAAAGTGTAACTCTCGTATAACTAAAGTTGTCCTTCGAAGGGTAAAA
CGAGAAAGAAGGATTATAATAGAAACTGATGATGATCGTCATGACCAAAAATCGGAGCTA
CTTGGATGCCTCTCATGCTTCAGTGTTTTCGTACGTATAGGAAAGAAGCTCAATCCATTC
CCGATATTTGGAAATGGAGGAGGAACTACTAGTACAGAAATAGCTGGAGAATCACATCTC
CCAAACACAGATGAAGGTGGCTTCATTCCAGGGATAATGCCTCCCAAGAAATCACCAGCT
GAAATTATAGAGAGTAAAGGAGATGATTACCGAATTCCTATATTGGAAGACCCAAGAGCT
TCTCCATCAACAGGGCATTCCAGCAACCCACAAAGACCAATACTTCCAGTTGAAGTTAAA
GATTCCAGATCACTGGAGATTGTAAAATGCATAGTATATGGAGGTTTAATAGAGGCAATC
ACAAGCTTGGGAGTGGTCTCCTCTGCAGCTGCATCTGATGCTGACACAATGAAGATTGTT
ACTATTGGAGTGGCAAATTTGATAGGTGGACTTTTTGTCATTTGTCAAAATTTGGTGGAC
TTGAAATATAGTGTTGGAGGAGGTTCCAATTACCAAGTAGATCGATACGGTGAACTACTT
GGCCAAAGAAAAAATTTCCCCCTTCATGCTACTTTTGCCATGTTGTCATATTTTGTGTTT
GGACTTATCCCCCCTGTAATATATGGCTTCACATTTCGGAAGAGTGATGACAGGGACTAC
AAGCTTATAGCAGTTGCCGCGGCTTCTCTTCTGTGTGTTATCATACTTGCTGCTGCAAAG
GCTTATACACAAAGAGCAAATAAGTTCAGTAAATACTTCAAGACTATTTTGTCTTATGTT
ATAGCTGCAGGTATGGTCTCAGGTGTTGGTTATGCAGCAGGTCATCTGATTAAGAGGCTC
ATGGATGACATGGGATGGTTTGACTCAAAGCCGATTTCACAGAATCCAGCCTGGGCATCC
TATTGA