Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071776
CDS Infomation

pacid=37474881 polypeptide=PGSC0003DMP400048550 locus=PGSC0003DMG400027919 ID=PGSC0003DMT400071776.v4.03 annot-version=v4.03
Sequence

ATGACTGCTGCTTCATCTTCTTCTCTACTGGGTTCATCAAGAATTGGTTCAAGACCCACC
ATTTCTGGACTTCATTCAGATTCACTCAACCCCAGATCAATCACCTTCTCTTCAACCCTC
CAAGGTCTCTCTCTCAGATCTTCAGGGTCAAAGAGACAGCTATACTCACGTGGAACAGGT
TCAGTTGTCATAGCACAGAACATGGACAGAGTTGAGGTTGATCTCTCTCTCAGCCCCAGG
GTAAATTCAGTAAAGCCTTCAAAAACGGTTGCTATAACTGATCAGGCAACTGCCCTCGTG
CAAGCTGGTGTACCTGTTATTAGATTAGCAGCTGGTGAACCTGATTTTGATACTCCAGCC
CCAATTGCAGAGGCTGGCATAAATGCAATTCGTGAAGGTCATACCAGGTATACACCAAAT
GCAGGTACAATGGAACTTCGATTGGCTATTTGTCATAAATTAAAAGAGGAGAACGGGCTA
TCATACACTCCTGATCAGATTGTGGTAAGCAATGGGGCAAAACAAAGTAGTGTTCAGGCA
GTGCTTGCAGTTTGTTCTCCAGGGGATGAGGTTCTTATTCCAGCTCCCTATTGGGTGAGT
TACCCTGAAATGGCAAGGATGGCAGATGCAACGCCTGTGATTCTTCCGACCAGCATATCT
GAAGATTTTCTATTAGATCCAAAGCTTCTTGAATCTAAACTGACTGCAAAGTCAAGAGTT
CTGATTCTTTGTTCTCCATCCAACCCAACAGGGTCTGTTTACCCTCGGAAATTGCTTGAG
GAGATTGCTGAGATTGTGGCTAGGCATCCGAGGCTTCTTGTTATATCAGATGAAATTTAC
GAACACATTATTTATGCACCAGCAACTCATACCAGCTTTGCATCTTTGCCTGGTATGTGG
GATAGGACTCTCACTGTAAATGGTTTCTCTAAGGCCTTTGCAATGACTGGTTGGAGACTT
GGCTATATTGCTGGTCCTAAACACTTTATTTCTGCATGTAATAAGTTACAGAGCCAGTTC
ACATCAGGTGCAAGTAGCATCTCCCAAAAGGCAGGTGTGGCTGCTCTGGGACTGGGCTAT
GCTGGTGGAGAAGCAGTTGCAACTATGTTAAAAGCATTTCGTGAGCGGCGAGATTTCCTT
GTCAAGAGCTTCGGGGAAATTGATAGTGTCAAAATTTCAGAGCCTCGGGGAGCATTTTAT
TTATTTATTGATTTAAGCTCTTATTACGGAGTAGAGGTTGATGGATTTGGCACCGTCAAC
AACTCAGAATCTCTTTGCCGATATTTACTGGATAAATCTCAAGTTGCGCTTGTCCCCGGG
GATGCATTTGGGGATGACACATGTATCCGTATCTCCTATGCAGCATCGCTTTCGACCTTG
CAGGCAGCTGTGGAGAGAATCAAGAAAGCATTGATTACTCTCAAACCTCCTGTTCCAGTG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400048550
PEP Infomation

pacid=37474881 transcript=PGSC0003DMT400071776 locus=PGSC0003DMG400027919 ID=PGSC0003DMT400071776.v4.03 annot-version=v4.03
Sequence

MTAASSSSLLGSSRIGSRPTISGLHSDSLNPRSITFSSTLQGLSLRSSGSKRQLYSRGTG
SVVIAQNMDRVEVDLSLSPRVNSVKPSKTVAITDQATALVQAGVPVIRLAAGEPDFDTPA
PIAEAGINAIREGHTRYTPNAGTMELRLAICHKLKEENGLSYTPDQIVVSNGAKQSSVQA
VLAVCSPGDEVLIPAPYWVSYPEMARMADATPVILPTSISEDFLLDPKLLESKLTAKSRV
LILCSPSNPTGSVYPRKLLEEIAEIVARHPRLLVISDEIYEHIIYAPATHTSFASLPGMW
DRTLTVNGFSKAFAMTGWRLGYIAGPKHFISACNKLQSQFTSGASSISQKAGVAALGLGY
AGGEAVATMLKAFRERRDFLVKSFGEIDSVKISEPRGAFYLFIDLSSYYGVEVDGFGTVN
NSESLCRYLLDKSQVALVPGDAFGDDTCIRISYAASLSTLQAAVERIKKALITLKPPVPV
*

Transcript Sequence

Transcript ID

PGSC0003DMT400071776
Transcript Infomation

pacid=37474881 locus=PGSC0003DMG400027919 ID=PGSC0003DMT400071776.v4.03 annot-version=v4.03
Sequence

ATGACTGCTGCTTCATCTTCTTCTCTACTGGGTTCATCAAGAATTGGTTCAAGACCCACC
ATTTCTGGACTTCATTCAGATTCACTCAACCCCAGATCAATCACCTTCTCTTCAACCCTC
CAAGGTCTCTCTCTCAGATCTTCAGGGTCAAAGAGACAGCTATACTCACGTGGAACAGGT
TCAGTTGTCATAGCACAGAACATGGACAGAGTTGAGGTTGATCTCTCTCTCAGCCCCAGG
GTAAATTCAGTAAAGCCTTCAAAAACGGTTGCTATAACTGATCAGGCAACTGCCCTCGTG
CAAGCTGGTGTACCTGTTATTAGATTAGCAGCTGGTGAACCTGATTTTGATACTCCAGCC
CCAATTGCAGAGGCTGGCATAAATGCAATTCGTGAAGGTCATACCAGGTATACACCAAAT
GCAGGTACAATGGAACTTCGATTGGCTATTTGTCATAAATTAAAAGAGGAGAACGGGCTA
TCATACACTCCTGATCAGATTGTGGTAAGCAATGGGGCAAAACAAAGTAGTGTTCAGGCA
GTGCTTGCAGTTTGTTCTCCAGGGGATGAGGTTCTTATTCCAGCTCCCTATTGGGTGAGT
TACCCTGAAATGGCAAGGATGGCAGATGCAACGCCTGTGATTCTTCCGACCAGCATATCT
GAAGATTTTCTATTAGATCCAAAGCTTCTTGAATCTAAACTGACTGCAAAGTCAAGAGTT
CTGATTCTTTGTTCTCCATCCAACCCAACAGGGTCTGTTTACCCTCGGAAATTGCTTGAG
GAGATTGCTGAGATTGTGGCTAGGCATCCGAGGCTTCTTGTTATATCAGATGAAATTTAC
GAACACATTATTTATGCACCAGCAACTCATACCAGCTTTGCATCTTTGCCTGGTATGTGG
GATAGGACTCTCACTGTAAATGGTTTCTCTAAGGCCTTTGCAATGACTGGTTGGAGACTT
GGCTATATTGCTGGTCCTAAACACTTTATTTCTGCATGTAATAAGTTACAGAGCCAGTTC
ACATCAGGTGCAAGTAGCATCTCCCAAAAGGCAGGTGTGGCTGCTCTGGGACTGGGCTAT
GCTGGTGGAGAAGCAGTTGCAACTATGTTAAAAGCATTTCGTGAGCGGCGAGATTTCCTT
GTCAAGAGCTTCGGGGAAATTGATAGTGTCAAAATTTCAGAGCCTCGGGGAGCATTTTAT
TTATTTATTGATTTAAGCTCTTATTACGGAGTAGAGGTTGATGGATTTGGCACCGTCAAC
AACTCAGAATCTCTTTGCCGATATTTACTGGATAAATCTCAAGTTGCGCTTGTCCCCGGG
GATGCATTTGGGGATGACACATGTATCCGTATCTCCTATGCAGCATCGCTTTCGACCTTG
CAGGCAGCTGTGGAGAGAATCAAGAAAGCATTGATTACTCTCAAACCTCCTGTTCCAGTG
TAA