Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071774
CDS Infomation

pacid=37473529 polypeptide=PGSC0003DMP400048548 locus=PGSC0003DMG400027918 ID=PGSC0003DMT400071774.v4.03 annot-version=v4.03
Sequence

ATGGCAACTCCTAACATTTCAATCAACAAAAGGTCCTCAGAGATTGTGTTTTTCGACTTG
GAAACAAACGTTCCATCGAAACCTGGACAGAAATTTTGGGTGTTGGAGTTTGGTGCAATG
GTAGTTTGTTCAAGAAAGCTTGTTGAACTTGAGAGCTACTGCACCCTTATTAGGCCAGGG
GACTTGTCAGTTGTTGGATTAAAGTCAGGGAGAGTCGATGGTATTACGCGAAAAGCAGTT
GCTGATGCACCTTCATTTGAACAAGTTGCACAAAAGATCTTCAACATTTTGGATGGTAGG
ATTTGGGCAGGTCATAATATACAGAGATTCGATTGTGTTCGTATTAAGGCTGCTTTCGCT
GAAATTGGTTGCCCTGCACCTGTGCCTGTTGGAATTATCGATTCCTTAGGTGTTTTATCT
GAGAAATTTGGTAAAAGAGCTGGAAACATGAAGATGGCTTCGTTAGCAGCTTACTTTGAT
CTCGGGGTGCAAAAACACAGGAGCTTAGACGATGTTCGGATGAATTTGGAAGTCCTAAAA
CATTGTGCAACAGTTCTATTTCTTGAATCAAGTCTACCAGATTTGCCAATTGGGAACTGT
CAAGGCACATCCAGCATTACTACAAGAAGTAGAAGTCAAGTGCATAATATTCCAACTTCT
CCGATCGATAAGTGGCAGAGTAGTCCTTCCTCAATAACAACAAGGAGTAGTAGCAGAGGG
AAATTTCCGTGCAGAGAAGAAACAAGCCGGAAATCTCCTCCATCGACAAGTGCTATTGGA
TATCAAAGAACTGTTCCTTATGCAAAACAAAGTTTGGGAAAGGTGACTGCAGGTGTGAGG
AACTTGTTGTGTAAAGCTCAAAACAAGCCTCTGAATACTTTACTAAAGCATTCGCAGACT
CTCTTCCGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400048548
PEP Infomation

pacid=37473529 transcript=PGSC0003DMT400071774 locus=PGSC0003DMG400027918 ID=PGSC0003DMT400071774.v4.03 annot-version=v4.03
Sequence

MATPNISINKRSSEIVFFDLETNVPSKPGQKFWVLEFGAMVVCSRKLVELESYCTLIRPG
DLSVVGLKSGRVDGITRKAVADAPSFEQVAQKIFNILDGRIWAGHNIQRFDCVRIKAAFA
EIGCPAPVPVGIIDSLGVLSEKFGKRAGNMKMASLAAYFDLGVQKHRSLDDVRMNLEVLK
HCATVLFLESSLPDLPIGNCQGTSSITTRSRSQVHNIPTSPIDKWQSSPSSITTRSSSRG
KFPCREETSRKSPPSTSAIGYQRTVPYAKQSLGKVTAGVRNLLCKAQNKPLNTLLKHSQT
LFR*

Transcript Sequence

Transcript ID

PGSC0003DMT400071774
Transcript Infomation

pacid=37473529 locus=PGSC0003DMG400027918 ID=PGSC0003DMT400071774.v4.03 annot-version=v4.03
Sequence

ATGGCAACTCCTAACATTTCAATCAACAAAAGGTCCTCAGAGATTGTGTTTTTCGACTTG
GAAACAAACGTTCCATCGAAACCTGGACAGAAATTTTGGGTGTTGGAGTTTGGTGCAATG
GTAGTTTGTTCAAGAAAGCTTGTTGAACTTGAGAGCTACTGCACCCTTATTAGGCCAGGG
GACTTGTCAGTTGTTGGATTAAAGTCAGGGAGAGTCGATGGTATTACGCGAAAAGCAGTT
GCTGATGCACCTTCATTTGAACAAGTTGCACAAAAGATCTTCAACATTTTGGATGGTAGG
ATTTGGGCAGGTCATAATATACAGAGATTCGATTGTGTTCGTATTAAGGCTGCTTTCGCT
GAAATTGGTTGCCCTGCACCTGTGCCTGTTGGAATTATCGATTCCTTAGGTGTTTTATCT
GAGAAATTTGGTAAAAGAGCTGGAAACATGAAGATGGCTTCGTTAGCAGCTTACTTTGAT
CTCGGGGTGCAAAAACACAGGAGCTTAGACGATGTTCGGATGAATTTGGAAGTCCTAAAA
CATTGTGCAACAGTTCTATTTCTTGAATCAAGTCTACCAGATTTGCCAATTGGGAACTGT
CAAGGCACATCCAGCATTACTACAAGAAGTAGAAGTCAAGTGCATAATATTCCAACTTCT
CCGATCGATAAGTGGCAGAGTAGTCCTTCCTCAATAACAACAAGGAGTAGTAGCAGAGGG
AAATTTCCGTGCAGAGAAGAAACAAGCCGGAAATCTCCTCCATCGACAAGTGCTATTGGA
TATCAAAGAACTGTTCCTTATGCAAAACAAAGTTTGGGAAAGGTGACTGCAGGTGTGAGG
AACTTGTTGTGTAAAGCTCAAAACAAGCCTCTGAATACTTTACTAAAGCATTCGCAGACT
CTCTTCCGATGA