Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071773
CDS Infomation

pacid=37475624 polypeptide=PGSC0003DMP400048547 locus=PGSC0003DMG402027917 ID=PGSC0003DMT400071773.v4.03 annot-version=v4.03
Sequence

ATGGATGATAAAGTTGTACCGGAGCTTACGGTAGATGATAAAATTGTAGCAGAGGTTACA
ATCCCGGAAAATGTTGCCAAAGAATTATTACTTGTGTCAAACTCATCTTCTTTAGAAACG
GCACTCGAGAAGCTGATAGAACTTGCCAAGGAGGAGGGTGGACGGTTAGATCTGTCGTCC
AAGAATGTTGTCACCACTGTCCTCCATCTCTGCCAGTCTCTGTCATCTATCTCTTACCGT
CAGCTGCTTTTATCGTCTCTTAAGGTACTTAGAAATCTGTGTGCTGGGGAAATAAGAAAT
CAGAATGAGTTTCTTCAACAAAGAGGAGTTGAAATTGTTGTGGATGTTATTACATCTGTA
GGACTTACTCCTGATCCTGATTGTATGATTATTCGAGTTGGGCTGCAACTTCTAGGAAAC
TACTCAGTGGGTGGGGGAGAACGTCAATGTGACGTGTGGTACCAATTGTTTCCTCATAAG
TTCTTGAAGATTGCTAGAGTTAGAAGCTGGGAAATATGTGATCCTTTATGTATGGTCATT
TACACTTGCTGTGATGGTACGGATGGACTGCTAACAGATTTATGTTCGGAACAAGGGTTG
CCCATTCTGATAGAAATTTTGCGGACTGCATCAGCTGTTGATCGTAAAGAAGTTTGGTTA
AAGTTGTTACTCTCAAAACTTTGCATTGAGGGCTCCTACATCTCATCAATTTTCTTCAAA
TTACATTCATTTCCTTCCATTCAGAACAATGGTGTTGTTACACATGCAACTGATCAATTT
GTTATTGAGCAGCCTTATCTGTTGAGTATACTTTCAGAAATCGTGAATGACCAAATAGAG
CATATTGTTGTTTCTCATGATTTTGCTCTAAGTATCTTTGGGATATTGAAGAGTGCTTTT
GTGGTCGTTGACTTTTCAATAAGAGGGAAAAGTGATCTTCCGGTGGGGTTTGCTCCTATT
GATGTTCTAGGATACTCTCTCACCATCTTGAGAGATATTTGCGCTTCTGATCACATGACA
AGCTCTAAGGAAGAAAGTTCAAAGGATGTCGTGGACGTACTTGTTTCCTCTGGGCTTATT
GAATTTCTTTTGAACTTGCTTCGGGATCTTGAACCTCCAACGACAATTAGGAAAGCAATG
AAGCAGGATCAGATAACGGAGGGGATAATATCTTCTTCATTTAGGTGTTGTCCATACCAA
GGTTTCCGGAGAGATATTGTTTCCATCATTGGGAATTGTGCTTATAGGAGAAGGTACGTC
CAAGATGAGATTAGGGATAAAAATGGGATCCTTTTACTGCTACAACAGTGTGTTATAGAT
GAAGATAATCCTTTCTTAAGGGAGTGGGGAATCTGGTGTGTGCGAAACCTATTGGAAGGG
AATGCAGAAAACCAAGGGGCTATTACCGATTTGGAGCTTCAAGGAACTGTAGATGTTCCA
GAACTTGTTAGACTTGGGCTTCGAGTAGAAGTTGATCCCGTAACTCGACGCACAAAGCTT
GTGAATGCCTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400048547
PEP Infomation

pacid=37475624 transcript=PGSC0003DMT400071773 locus=PGSC0003DMG402027917 ID=PGSC0003DMT400071773.v4.03 annot-version=v4.03
Sequence

MDDKVVPELTVDDKIVAEVTIPENVAKELLLVSNSSSLETALEKLIELAKEEGGRLDLSS
KNVVTTVLHLCQSLSSISYRQLLLSSLKVLRNLCAGEIRNQNEFLQQRGVEIVVDVITSV
GLTPDPDCMIIRVGLQLLGNYSVGGGERQCDVWYQLFPHKFLKIARVRSWEICDPLCMVI
YTCCDGTDGLLTDLCSEQGLPILIEILRTASAVDRKEVWLKLLLSKLCIEGSYISSIFFK
LHSFPSIQNNGVVTHATDQFVIEQPYLLSILSEIVNDQIEHIVVSHDFALSIFGILKSAF
VVVDFSIRGKSDLPVGFAPIDVLGYSLTILRDICASDHMTSSKEESSKDVVDVLVSSGLI
EFLLNLLRDLEPPTTIRKAMKQDQITEGIISSSFRCCPYQGFRRDIVSIIGNCAYRRRYV
QDEIRDKNGILLLLQQCVIDEDNPFLREWGIWCVRNLLEGNAENQGAITDLELQGTVDVP
ELVRLGLRVEVDPVTRRTKLVNAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400071773
Transcript Infomation

pacid=37475624 locus=PGSC0003DMG402027917 ID=PGSC0003DMT400071773.v4.03 annot-version=v4.03
Sequence

ATGGATGATAAAGTTGTACCGGAGCTTACGGTAGATGATAAAATTGTAGCAGAGGTTACA
ATCCCGGAAAATGTTGCCAAAGAATTATTACTTGTGTCAAACTCATCTTCTTTAGAAACG
GCACTCGAGAAGCTGATAGAACTTGCCAAGGAGGAGGGTGGACGGTTAGATCTGTCGTCC
AAGAATGTTGTCACCACTGTCCTCCATCTCTGCCAGTCTCTGTCATCTATCTCTTACCGT
CAGCTGCTTTTATCGTCTCTTAAGGTACTTAGAAATCTGTGTGCTGGGGAAATAAGAAAT
CAGAATGAGTTTCTTCAACAAAGAGGAGTTGAAATTGTTGTGGATGTTATTACATCTGTA
GGACTTACTCCTGATCCTGATTGTATGATTATTCGAGTTGGGCTGCAACTTCTAGGAAAC
TACTCAGTGGGTGGGGGAGAACGTCAATGTGACGTGTGGTACCAATTGTTTCCTCATAAG
TTCTTGAAGATTGCTAGAGTTAGAAGCTGGGAAATATGTGATCCTTTATGTATGGTCATT
TACACTTGCTGTGATGGTACGGATGGACTGCTAACAGATTTATGTTCGGAACAAGGGTTG
CCCATTCTGATAGAAATTTTGCGGACTGCATCAGCTGTTGATCGTAAAGAAGTTTGGTTA
AAGTTGTTACTCTCAAAACTTTGCATTGAGGGCTCCTACATCTCATCAATTTTCTTCAAA
TTACATTCATTTCCTTCCATTCAGAACAATGGTGTTGTTACACATGCAACTGATCAATTT
GTTATTGAGCAGCCTTATCTGTTGAGTATACTTTCAGAAATCGTGAATGACCAAATAGAG
CATATTGTTGTTTCTCATGATTTTGCTCTAAGTATCTTTGGGATATTGAAGAGTGCTTTT
GTGGTCGTTGACTTTTCAATAAGAGGGAAAAGTGATCTTCCGGTGGGGTTTGCTCCTATT
GATGTTCTAGGATACTCTCTCACCATCTTGAGAGATATTTGCGCTTCTGATCACATGACA
AGCTCTAAGGAAGAAAGTTCAAAGGATGTCGTGGACGTACTTGTTTCCTCTGGGCTTATT
GAATTTCTTTTGAACTTGCTTCGGGATCTTGAACCTCCAACGACAATTAGGAAAGCAATG
AAGCAGGATCAGATAACGGAGGGGATAATATCTTCTTCATTTAGGTGTTGTCCATACCAA
GGTTTCCGGAGAGATATTGTTTCCATCATTGGGAATTGTGCTTATAGGAGAAGGTACGTC
CAAGATGAGATTAGGGATAAAAATGGGATCCTTTTACTGCTACAACAGTGTGTTATAGAT
GAAGATAATCCTTTCTTAAGGGAGTGGGGAATCTGGTGTGTGCGAAACCTATTGGAAGGG
AATGCAGAAAACCAAGGGGCTATTACCGATTTGGAGCTTCAAGGAACTGTAGATGTTCCA
GAACTTGTTAGACTTGGGCTTCGAGTAGAAGTTGATCCCGTAACTCGACGCACAAAGCTT
GTGAATGCCTCATGA