Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071749
CDS Infomation

pacid=37472557 polypeptide=PGSC0003DMP400048536 locus=PGSC0003DMG400027912 ID=PGSC0003DMT400071749.v4.03 annot-version=v4.03
Sequence

ATGGCCGTAACAAGAGAAGGTGAGACAGAGTCTTCACAGTTTACACCAAATACTGATCCA
TCAAACACAAAAGAGTTCTCCCAAACACTTCAATCTTTTGCTGAGAGTGAGAAAGTACAA
CTTTCTGTGTTCTCCCAAACACTTCAAACACCCGTGGCTTCTGAGAGAAGGCGCGATTGG
GTACTTAATGTGCCCGAACCACCAGGACTGTTATCTAATCTGAAAACTTCATTCAAGAAA
ACACTACTCTGCCCTCTTGAAAACAAGATTCAATGCCTTGGAAAGCATCCTGTTCCTACA
CTCGTTTCGATTCTCAGCGTTATATTTCCACCACTTTCTTGGTGTAAAGAATATAATGTC
ACAAAATTCAAAAGGGACATCTTGGCTGGTTTAACTCTTGCAAGCCTTTGCATCCCTCAG
AGCATTGGCTACGCGACTCTTGCAAAACTTGATCCTCAATATGGCCTATACACAAGTGTT
ATTCCGCCACTTATTTACGCTATGATGGGGAGTTCAAGAGATATAGCAATTGGACCAGTT
GCTGTTGTTTCACTACTCTTGTCCTCAATGATTCCCAAACTTGAAGATCCTACCACTAAT
CCAATTGCATATCGAAAACTCGTGCTTACTGTTACCTTCTTCGCGGGTGCTTTTCAAGCT
GCTTTTGGACTACTTAGGTTGGGATTTCTGGTTGATTTTCTGTCACATGCTGCTATTGTT
GGTTTTATGGCTGGTGCTGCTTGTGTGATTGGACTACAACAGCTCAAATCACTGCTTGGG
ATTTCAAATTTTACAAACAAGACAGATATTATCTCTGTCTTGACTTCTATTTGCAAATCA
ATGCATACTTTGAATCCTTATAGCTTTATAATTGGGAGTTCATTTCTGATCTTCATCCTT
TCTACCAAGTACTATCTGGCAAGAAAGTACAAGAAACTGTTCTGGTTAGCTGCAATGGCA
CCACTGCTGTCTGTAATAATGTCAACATTACTTGTTTTCTTGACAAGAGCTGATAAACAT
GGCGTTAAGATAGTGAAACACATCACTGGAGGGTTGAACCCAAGTTCACTCCATGAATTA
CAATTCAATAGTCCACATACTGCTGAAGCTGCCAAAATTGGGCTAATTATTGCACTTGTC
GCACTCACGGAAGCTATTGCAGTTGGACGATCTTTCGCTACTATGAAAGGATACCGTCTT
GATGGAAACAAGGAAATGCTGGCTATGGGTGTTATGAACATTACTGGATCATTAACTTCT
TGTTATGTTGCAACTGGGTCATTCTCAAGAACAGCAGTGAATTTCAGTGCTGGTTGTGAA
ACAGCAGTGTCCAACATAGTGATGGCTATAACAGTGCTAATATCACTTGAATTTTGCACT
AGGCTACTGTACTTCACTCCAGTAGCCATTTTAGCTTCTATTATTCTCTCAGCTTTGCCT
GGACTCATCAACATAACTGAAGCTAAATACATATGGAAAGTTGATAAGATGGATTTTCTT
GCTTGTGCTGCTGCTTTTCTTGGTGTCCTTTTTGTATCTGTTGAGATTGGCCTCCTCCTT
GCGGTTGGTATATCATTTGCAAAGATAATTTTGAACTCAATCCAGCCTGGGACAGAAAAA
CTAGGAAGGCTTCCAGGAAGTGATTTGTTTGGAGATATGGAACAATATCCCATAGCTACA
ACAACTCCTGGGGCTCTTATTGTTAGAGTCAAATCTGCTTTGCTTTGTTTTGCAAATGCC
AACTTTATTAGAGGAAGGATATTAAACTTAGCACTGGAAGAACAAAATGAGGGTGTCATG
GAAAGTGCTAATCAAGATAGAGTGCAACTAGTTATTCTTGACATGTCAAATTTGCTCAAC
ATTGACACATCTAGCATAGCTGCTCTTGAGGACCTGCAAAATGACCTAGAATCAAATGGA
ATGCAGTTGGCACTAGCTAACCCAAGGTGGCATGTGATACACAAATTAAGGCTAGCCAAT
TTTTTGAAGAAAATTGAAGGGAGGGTCTTTTTGACCATTGGTGAAGCCATTGAGGCATGT
TTGACTAGTAAGAACATGCTTCCTATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400048536
PEP Infomation

pacid=37472557 transcript=PGSC0003DMT400071749 locus=PGSC0003DMG400027912 ID=PGSC0003DMT400071749.v4.03 annot-version=v4.03
Sequence

MAVTREGETESSQFTPNTDPSNTKEFSQTLQSFAESEKVQLSVFSQTLQTPVASERRRDW
VLNVPEPPGLLSNLKTSFKKTLLCPLENKIQCLGKHPVPTLVSILSVIFPPLSWCKEYNV
TKFKRDILAGLTLASLCIPQSIGYATLAKLDPQYGLYTSVIPPLIYAMMGSSRDIAIGPV
AVVSLLLSSMIPKLEDPTTNPIAYRKLVLTVTFFAGAFQAAFGLLRLGFLVDFLSHAAIV
GFMAGAACVIGLQQLKSLLGISNFTNKTDIISVLTSICKSMHTLNPYSFIIGSSFLIFIL
STKYYLARKYKKLFWLAAMAPLLSVIMSTLLVFLTRADKHGVKIVKHITGGLNPSSLHEL
QFNSPHTAEAAKIGLIIALVALTEAIAVGRSFATMKGYRLDGNKEMLAMGVMNITGSLTS
CYVATGSFSRTAVNFSAGCETAVSNIVMAITVLISLEFCTRLLYFTPVAILASIILSALP
GLINITEAKYIWKVDKMDFLACAAAFLGVLFVSVEIGLLLAVGISFAKIILNSIQPGTEK
LGRLPGSDLFGDMEQYPIATTTPGALIVRVKSALLCFANANFIRGRILNLALEEQNEGVM
ESANQDRVQLVILDMSNLLNIDTSSIAALEDLQNDLESNGMQLALANPRWHVIHKLRLAN
FLKKIEGRVFLTIGEAIEACLTSKNMLPI*

Transcript Sequence

Transcript ID

PGSC0003DMT400071749
Transcript Infomation

pacid=37472557 locus=PGSC0003DMG400027912 ID=PGSC0003DMT400071749.v4.03 annot-version=v4.03
Sequence

ATGGCCGTAACAAGAGAAGGTGAGACAGAGTCTTCACAGTTTACACCAAATACTGATCCA
TCAAACACAAAAGAGTTCTCCCAAACACTTCAATCTTTTGCTGAGAGTGAGAAAGTACAA
CTTTCTGTGTTCTCCCAAACACTTCAAACACCCGTGGCTTCTGAGAGAAGGCGCGATTGG
GTACTTAATGTGCCCGAACCACCAGGACTGTTATCTAATCTGAAAACTTCATTCAAGAAA
ACACTACTCTGCCCTCTTGAAAACAAGATTCAATGCCTTGGAAAGCATCCTGTTCCTACA
CTCGTTTCGATTCTCAGCGTTATATTTCCACCACTTTCTTGGTGTAAAGAATATAATGTC
ACAAAATTCAAAAGGGACATCTTGGCTGGTTTAACTCTTGCAAGCCTTTGCATCCCTCAG
AGCATTGGCTACGCGACTCTTGCAAAACTTGATCCTCAATATGGCCTATACACAAGTGTT
ATTCCGCCACTTATTTACGCTATGATGGGGAGTTCAAGAGATATAGCAATTGGACCAGTT
GCTGTTGTTTCACTACTCTTGTCCTCAATGATTCCCAAACTTGAAGATCCTACCACTAAT
CCAATTGCATATCGAAAACTCGTGCTTACTGTTACCTTCTTCGCGGGTGCTTTTCAAGCT
GCTTTTGGACTACTTAGGTTGGGATTTCTGGTTGATTTTCTGTCACATGCTGCTATTGTT
GGTTTTATGGCTGGTGCTGCTTGTGTGATTGGACTACAACAGCTCAAATCACTGCTTGGG
ATTTCAAATTTTACAAACAAGACAGATATTATCTCTGTCTTGACTTCTATTTGCAAATCA
ATGCATACTTTGAATCCTTATAGCTTTATAATTGGGAGTTCATTTCTGATCTTCATCCTT
TCTACCAAGTACTATCTGGCAAGAAAGTACAAGAAACTGTTCTGGTTAGCTGCAATGGCA
CCACTGCTGTCTGTAATAATGTCAACATTACTTGTTTTCTTGACAAGAGCTGATAAACAT
GGCGTTAAGATAGTGAAACACATCACTGGAGGGTTGAACCCAAGTTCACTCCATGAATTA
CAATTCAATAGTCCACATACTGCTGAAGCTGCCAAAATTGGGCTAATTATTGCACTTGTC
GCACTCACGGAAGCTATTGCAGTTGGACGATCTTTCGCTACTATGAAAGGATACCGTCTT
GATGGAAACAAGGAAATGCTGGCTATGGGTGTTATGAACATTACTGGATCATTAACTTCT
TGTTATGTTGCAACTGGGTCATTCTCAAGAACAGCAGTGAATTTCAGTGCTGGTTGTGAA
ACAGCAGTGTCCAACATAGTGATGGCTATAACAGTGCTAATATCACTTGAATTTTGCACT
AGGCTACTGTACTTCACTCCAGTAGCCATTTTAGCTTCTATTATTCTCTCAGCTTTGCCT
GGACTCATCAACATAACTGAAGCTAAATACATATGGAAAGTTGATAAGATGGATTTTCTT
GCTTGTGCTGCTGCTTTTCTTGGTGTCCTTTTTGTATCTGTTGAGATTGGCCTCCTCCTT
GCGGTTGGTATATCATTTGCAAAGATAATTTTGAACTCAATCCAGCCTGGGACAGAAAAA
CTAGGAAGGCTTCCAGGAAGTGATTTGTTTGGAGATATGGAACAATATCCCATAGCTACA
ACAACTCCTGGGGCTCTTATTGTTAGAGTCAAATCTGCTTTGCTTTGTTTTGCAAATGCC
AACTTTATTAGAGGAAGGATATTAAACTTAGCACTGGAAGAACAAAATGAGGGTGTCATG
GAAAGTGCTAATCAAGATAGAGTGCAACTAGTTATTCTTGACATGTCAAATTTGCTCAAC
ATTGACACATCTAGCATAGCTGCTCTTGAGGACCTGCAAAATGACCTAGAATCAAATGGA
ATGCAGTTGGCACTAGCTAACCCAAGGTGGCATGTGATACACAAATTAAGGCTAGCCAAT
TTTTTGAAGAAAATTGAAGGGAGGGTCTTTTTGACCATTGGTGAAGCCATTGAGGCATGT
TTGACTAGTAAGAACATGCTTCCTATTTGA