Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071737
CDS Infomation

pacid=37456699 polypeptide=PGSC0003DMP400048529 locus=PGSC0003DMG400027906 ID=PGSC0003DMT400071737.v4.03 annot-version=v4.03
Sequence

ATGGCGGCCATGATCCGCCTGTTCAGATCTTCATCATCTTCCTCATCCAATTCAATTTCC
CTTATCAGTAGATCTTTATCTACAGCAGCTGCATCTGAGACAGTGAAATCCCAATCTTAC
CCTCATAATCCCCATTCTACAAGTGTTGATCCCAAGGCTAAAACTGTCCAATGGGTCTTT
TTGGGTTGTCCCGGTGTCGGAAAAGGTACATATGCTAGCCGTCTTTCAACCCTTTTAGGC
GTTCCTCATATTGCTACCGGAGATCTTGTTCGTGATGAGTTGAAATCTTCAGGTCCTTTG
TCGAAACAACTTGCAGAGATTGTCAACCAAGGAAAATTGGTTTCAGATGAGATTATACTG
AATTTACTATCTAAAAGGCTCGAGAGTGGGGAAGCTAAGGGTGAAGCTGGATTCATACTT
GATGGATTCCCTAGAACTGTGAGACAAGCAGAAATACTGACTGAGGTTACAGACATAGAT
TTGGTGGTTAATCTCAAACTTCCAGAGCGGGTATTGATTGAGAAATGCCTTGGCCGAAGG
ATCTGCAGTGAATGTGGAAAGAATTTCAACGTGGCATCTATAGATGTCGCTGGTGAAAAT
GGGGCTCCTAGGATCAGCATGGCTCCCCTTAACCCTCCCTCACAGTGTGTTTCAAAGTTA
ATCACTCGAGCAGATGATACAGAAGCTATTGTTAAGGAAAGGCTCAGTATATACTGGGAT
AAGAGTCAGCCTGTTGAGGACTTCTACCGTAGCCAAGGAAAGTTACTGGAATTTGATTTA
CCGGGAGGCATCCCCGAATCATGGCCTAAGTTGCTGGAAGTTCTCAACCTTGATGAACAG
GAATATAAACTGTCTGCTGCAGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400048529
PEP Infomation

pacid=37456699 transcript=PGSC0003DMT400071737 locus=PGSC0003DMG400027906 ID=PGSC0003DMT400071737.v4.03 annot-version=v4.03
Sequence

MAAMIRLFRSSSSSSSNSISLISRSLSTAAASETVKSQSYPHNPHSTSVDPKAKTVQWVF
LGCPGVGKGTYASRLSTLLGVPHIATGDLVRDELKSSGPLSKQLAEIVNQGKLVSDEIIL
NLLSKRLESGEAKGEAGFILDGFPRTVRQAEILTEVTDIDLVVNLKLPERVLIEKCLGRR
ICSECGKNFNVASIDVAGENGAPRISMAPLNPPSQCVSKLITRADDTEAIVKERLSIYWD
KSQPVEDFYRSQGKLLEFDLPGGIPESWPKLLEVLNLDEQEYKLSAAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400071737
Transcript Infomation

pacid=37456699 locus=PGSC0003DMG400027906 ID=PGSC0003DMT400071737.v4.03 annot-version=v4.03
Sequence

ATGGCGGCCATGATCCGCCTGTTCAGATCTTCATCATCTTCCTCATCCAATTCAATTTCC
CTTATCAGTAGATCTTTATCTACAGCAGCTGCATCTGAGACAGTGAAATCCCAATCTTAC
CCTCATAATCCCCATTCTACAAGTGTTGATCCCAAGGCTAAAACTGTCCAATGGGTCTTT
TTGGGTTGTCCCGGTGTCGGAAAAGGTACATATGCTAGCCGTCTTTCAACCCTTTTAGGC
GTTCCTCATATTGCTACCGGAGATCTTGTTCGTGATGAGTTGAAATCTTCAGGTCCTTTG
TCGAAACAACTTGCAGAGATTGTCAACCAAGGAAAATTGGTTTCAGATGAGATTATACTG
AATTTACTATCTAAAAGGCTCGAGAGTGGGGAAGCTAAGGGTGAAGCTGGATTCATACTT
GATGGATTCCCTAGAACTGTGAGACAAGCAGAAATACTGACTGAGGTTACAGACATAGAT
TTGGTGGTTAATCTCAAACTTCCAGAGCGGGTATTGATTGAGAAATGCCTTGGCCGAAGG
ATCTGCAGTGAATGTGGAAAGAATTTCAACGTGGCATCTATAGATGTCGCTGGTGAAAAT
GGGGCTCCTAGGATCAGCATGGCTCCCCTTAACCCTCCCTCACAGTGTGTTTCAAAGTTA
ATCACTCGAGCAGATGATACAGAAGCTATTGTTAAGGAAAGGCTCAGTATATACTGGGAT
AAGAGTCAGCCTGTTGAGGACTTCTACCGTAGCCAAGGAAAGTTACTGGAATTTGATTTA
CCGGGAGGCATCCCCGAATCATGGCCTAAGTTGCTGGAAGTTCTCAACCTTGATGAACAG
GAATATAAACTGTCTGCTGCAGCTTAG