Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071701
CDS Infomation

pacid=37431943 polypeptide=PGSC0003DMP400048503 locus=PGSC0003DMG400027893 ID=PGSC0003DMT400071701.v4.03 annot-version=v4.03
Sequence

ATGACAGTGATGAAGATTGGATGGGAATCACTTGTTCCTAGGTGTATTAAATCACAGGAA
AATTCGAAAAGAAATCCAAAAATAGTAAAGGTATCGGTTACAAAACAACTATCGTTCCAT
GGGATTCCTGTATCGGATATTAGTTCATCAACTATATCATCAGATCTTTCGATCTCTCTT
GCTGGTTCAAATATTCATGCCTTTACGCAACAAGAACTTAGAGTGATCACACAAAACTTC
TCCACGAGTAATTTCATCGGTGAAGGAGGGTTCGGCCCAGTTCACAAAGGATTCATTGAT
GATAAACTTAGACCTAATGCTATTAAAGCTCAGCCTGTTGCTGTTAAGAACCTCGATTTA
GATGGTACACAAGGTCATCGAGAATGGCTGACAGAAGTGATATTTCTTGGACAATTGAGG
CATCCACATCTAGTGAAGTTGATTGGATATTGTTGTGAAGAAGATAACAGATTGCTAGTC
TATGAATACATGCCTAGAGGAAGCTTGGAGAATCAACTTTTTAGAAGATATTCAGTATCA
CTTCCATGGTCAACGAGGATGAAAATAGCTATTGGTGCTGCAAAAGGTCTTGCTTTTCTC
CATGAAGCTAAAAAACCTGTCATTTATCGTGATTTCAAGGCATCAAACATTTTGTTAGAC
TCCGATTACACTGCTAAACTCTCAGATTTTGGACTTGCAAAAGATGGTCCAGAAGGAGAT
GACACACACGTCTCAACTCGAGTCATGGGAACACATGGCTATGCTGCTCCTGAATACATC
ATGACAGGTCATTTGACTGCAGCTAGTGATGTATACAGCTTCGGAGTAGTACTCTTGGAG
CTTCTAACTGGTAGAAGATCTGTAGACAAAGGTCGTCCACATAGAGAACAAAACTTGGTA
GATTGGGCAAGACCACAACTGAAAGATCCTCGAAAACTACGTAGAATAATGGATCCAAGG
CTCGAAGGCATGTACTCAGAAGAAGGAGTTCAAAAAGCAGCATTAGTAGCTTATCAATGC
CTAAGCAATAGGCCAAAAGCTAGACCAGATATGAGTAATGTGGTGACAACTTTAGAACCT
TTAAAGGACTATGAAGATAACTCAATGGTAACATTTGTGTACACAGCTCCAACAGATGAT
CAACAGGAAGTGAAGGTCAAAGAAAGTAGTGCTAGCCCACATCATCATCACCAAAAACAA
CACCATCATCATCATAATAGAAGAAGTACTCCTTCATCGCCAACCATTCACTCAGAAACA
ACTATACACAAGAGATTAACTCCAAATTCACCATTGCAAAATGGTTTCAAGAGATCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400048503
PEP Infomation

pacid=37431943 transcript=PGSC0003DMT400071701 locus=PGSC0003DMG400027893 ID=PGSC0003DMT400071701.v4.03 annot-version=v4.03
Sequence

MTVMKIGWESLVPRCIKSQENSKRNPKIVKVSVTKQLSFHGIPVSDISSSTISSDLSISL
AGSNIHAFTQQELRVITQNFSTSNFIGEGGFGPVHKGFIDDKLRPNAIKAQPVAVKNLDL
DGTQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEDNRLLVYEYMPRGSLENQLFRRYSVS
LPWSTRMKIAIGAAKGLAFLHEAKKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGD
DTHVSTRVMGTHGYAAPEYIMTGHLTAASDVYSFGVVLLELLTGRRSVDKGRPHREQNLV
DWARPQLKDPRKLRRIMDPRLEGMYSEEGVQKAALVAYQCLSNRPKARPDMSNVVTTLEP
LKDYEDNSMVTFVYTAPTDDQQEVKVKESSASPHHHHQKQHHHHHNRRSTPSSPTIHSET
TIHKRLTPNSPLQNGFKRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400071701
Transcript Infomation

pacid=37431943 locus=PGSC0003DMG400027893 ID=PGSC0003DMT400071701.v4.03 annot-version=v4.03
Sequence

ATGACAGTGATGAAGATTGGATGGGAATCACTTGTTCCTAGGTGTATTAAATCACAGGAA
AATTCGAAAAGAAATCCAAAAATAGTAAAGGTATCGGTTACAAAACAACTATCGTTCCAT
GGGATTCCTGTATCGGATATTAGTTCATCAACTATATCATCAGATCTTTCGATCTCTCTT
GCTGGTTCAAATATTCATGCCTTTACGCAACAAGAACTTAGAGTGATCACACAAAACTTC
TCCACGAGTAATTTCATCGGTGAAGGAGGGTTCGGCCCAGTTCACAAAGGATTCATTGAT
GATAAACTTAGACCTAATGCTATTAAAGCTCAGCCTGTTGCTGTTAAGAACCTCGATTTA
GATGGTACACAAGGTCATCGAGAATGGCTGACAGAAGTGATATTTCTTGGACAATTGAGG
CATCCACATCTAGTGAAGTTGATTGGATATTGTTGTGAAGAAGATAACAGATTGCTAGTC
TATGAATACATGCCTAGAGGAAGCTTGGAGAATCAACTTTTTAGAAGATATTCAGTATCA
CTTCCATGGTCAACGAGGATGAAAATAGCTATTGGTGCTGCAAAAGGTCTTGCTTTTCTC
CATGAAGCTAAAAAACCTGTCATTTATCGTGATTTCAAGGCATCAAACATTTTGTTAGAC
TCCGATTACACTGCTAAACTCTCAGATTTTGGACTTGCAAAAGATGGTCCAGAAGGAGAT
GACACACACGTCTCAACTCGAGTCATGGGAACACATGGCTATGCTGCTCCTGAATACATC
ATGACAGGTCATTTGACTGCAGCTAGTGATGTATACAGCTTCGGAGTAGTACTCTTGGAG
CTTCTAACTGGTAGAAGATCTGTAGACAAAGGTCGTCCACATAGAGAACAAAACTTGGTA
GATTGGGCAAGACCACAACTGAAAGATCCTCGAAAACTACGTAGAATAATGGATCCAAGG
CTCGAAGGCATGTACTCAGAAGAAGGAGTTCAAAAAGCAGCATTAGTAGCTTATCAATGC
CTAAGCAATAGGCCAAAAGCTAGACCAGATATGAGTAATGTGGTGACAACTTTAGAACCT
TTAAAGGACTATGAAGATAACTCAATGGTAACATTTGTGTACACAGCTCCAACAGATGAT
CAACAGGAAGTGAAGGTCAAAGAAAGTAGTGCTAGCCCACATCATCATCACCAAAAACAA
CACCATCATCATCATAATAGAAGAAGTACTCCTTCATCGCCAACCATTCACTCAGAAACA
ACTATACACAAGAGATTAACTCCAAATTCACCATTGCAAAATGGTTTCAAGAGATCTTAG