Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071667
CDS Infomation

pacid=37448777 polypeptide=PGSC0003DMP400048480 locus=PGSC0003DMG400027878 ID=PGSC0003DMT400071667.v4.03 annot-version=v4.03
Sequence

ATGAAGATCACCGGCGACAAGGCTGAGCTACCGGCGGTTACGTTTCCCGGACTAGATCTC
TTACAAAAACCGACGAATACTCGTAAACCGCCTCGAAGGAAAACAAACAACTTTGGCGCT
GGAGTGAAGTTGCGGAGAGACATTGGAGGAAATACTCCTAAAGGAAGGAGGAGTAGGCCG
GAAACTCCTCTTCTACGGTGGAAGTTCAACGAGGATATTCATGACAATGGTTCTGTAAAG
GAGGAAACTTCGACGGTGGAGGTTGATCGGAAATGTAGTCGGAATAATGGTAGGACTGTG
GTTTCTGTTAGGAAGTTAGGTGCGGGACTGTTTAGGCAGCAGCAGCTGCCGGAAGTAAAA
AACGGTCAGAAGTTAGGGTTTCAGGCTGGTCGGGTTGAGATGCCCTTTCATTTTCATCAT
CGCAGTAAAGTGCATGACTCTCTCATTAATGATCCAGTGCAGAGTCCTCGGTCTGTCTTT
GGTCCAACTAATGGCCTTTTTCACAAGCTAGAAACCTCACTTCAGTTTTCCCATTCTGCT
ATGGAGGGGGCAACAAAGTGGGATCCAGTTGGCTGGACAACAGCGGTGGAAACAAAGAAG
ATATACGGCTCTCAGAAGCTTCTTGATCAACAAGTGAATACTGCTTCAATGATCTCTTCT
CTTGAGGCAGAACTAGAGTGTGCTCATGCCCGAGCTCATCAACTTGAGACAGAGCGGCAT
TCATCAAAAAAGAAACTCGAGCAGTTTTTGAGGAAACTTAGTGAAGAAAAAGCAGCATGG
CGGAGCAAAGAGCATGAGAAAATTCGTGCAATTATGGATGACATGAAAGCTGACTTCTCC
CGGGAGAGGAAAAACCGGAAGAGGCTGGAAATAGTCAATTCCAAATTAGTTAATGAATTG
GCTGATGCCAAGTTATCAGCAAAACGCTATTTGCAAAATTTTGAAAAAGAAAGACAGGCT
AGAGGGTTGATAGAAGAAGTGTGCGATGAATTGGCCAAAGAACTTGGAGAAGACAAGGCT
GAGGTTGAGGAAATGAAGAGGGAATCTCTGAAGTTCACAGAAGAAGTAGATGAAGAAAGA
AAGATGTTGCAGATGGCTGAGGTTTGGCGTGAGGAACGGGTCCAGATGAAACTAGTTGAT
GCCAAGGTGATGCTTGAAGAAAAGTATTCCCAAATGAACAAGCTTATTGGAGAACTAGAA
TCATTTCTGAATTCTAGAGGTATGAGTTTTGATGTGGAGGAGATGAAAAGAGCTGAGCAA
CTCCAACAGGCCGCTTCCTCTTGTAGCATTCGTGATATTAGAGAACTCACTTATGAACCA
CCAAATCAAGATGATATTCTTTCCGTTTTTGAGGATGTTCATTTTGTTGAACCTGATGAA
AAGGATATCCAGCCATGTACATTTAGTCCTCGCTCTCTCAGTCCTGATGGTGTTGCTTAT
GACTTCCGCAGATATTCACAAGCATATGTCAATCAGAGTGCTAATTTAGAGGAAGAGGGA
AGTGAGTGGGAAACGGTGACCAATGTTGAGGAGCAAGGTTCCAACTATTCTCTTGAAGGA
AGCATTTCATCCGTCAACAAGAATTGCCGGCACAGCAATGTATCAAGAAGTAGAGCAGAC
TCAGAGGGAATTGGTGATGATGTCACATCGGTTTCAGAGATTAGTGAAGTATGTTCTGGA
CCAGCTCGGCAACTTACAGAGTTGTCATCTGCATCGAAACATTGGAAATCACGCCCGTGT
AATGGAGACAATTTCAAAATAAAATCACTAGAAGGAACTAAAGGGAAGCTGTCAAATGGA
AGACTATCTAATGGGGCCATTCTTTCTCCGGATCATGGTTCTAGTAAAGGTGGCTTTAGC
CCCTCAGACCTTGGCCAGGAATGGAGCTCACCTGAGTCTGGCAACTCACAAATAGCACGC
GGGATGAAAGGGTGCATTGAATGGCCGCATAACTCTCAGAAGAAAAGCTTAAAAGCAAAG
TTATTGCAGGCAAGAACAGAGAGCCAGAAGGTCCAGTTGCGCCAGGTCTTGAAGCAGAAG
ATCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400048480
PEP Infomation

pacid=37448777 transcript=PGSC0003DMT400071667 locus=PGSC0003DMG400027878 ID=PGSC0003DMT400071667.v4.03 annot-version=v4.03
Sequence

MKITGDKAELPAVTFPGLDLLQKPTNTRKPPRRKTNNFGAGVKLRRDIGGNTPKGRRSRP
ETPLLRWKFNEDIHDNGSVKEETSTVEVDRKCSRNNGRTVVSVRKLGAGLFRQQQLPEVK
NGQKLGFQAGRVEMPFHFHHRSKVHDSLINDPVQSPRSVFGPTNGLFHKLETSLQFSHSA
MEGATKWDPVGWTTAVETKKIYGSQKLLDQQVNTASMISSLEAELECAHARAHQLETERH
SSKKKLEQFLRKLSEEKAAWRSKEHEKIRAIMDDMKADFSRERKNRKRLEIVNSKLVNEL
ADAKLSAKRYLQNFEKERQARGLIEEVCDELAKELGEDKAEVEEMKRESLKFTEEVDEER
KMLQMAEVWREERVQMKLVDAKVMLEEKYSQMNKLIGELESFLNSRGMSFDVEEMKRAEQ
LQQAASSCSIRDIRELTYEPPNQDDILSVFEDVHFVEPDEKDIQPCTFSPRSLSPDGVAY
DFRRYSQAYVNQSANLEEEGSEWETVTNVEEQGSNYSLEGSISSVNKNCRHSNVSRSRAD
SEGIGDDVTSVSEISEVCSGPARQLTELSSASKHWKSRPCNGDNFKIKSLEGTKGKLSNG
RLSNGAILSPDHGSSKGGFSPSDLGQEWSSPESGNSQIARGMKGCIEWPHNSQKKSLKAK
LLQARTESQKVQLRQVLKQKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400071667
Transcript Infomation

pacid=37448777 locus=PGSC0003DMG400027878 ID=PGSC0003DMT400071667.v4.03 annot-version=v4.03
Sequence

ATGAAGATCACCGGCGACAAGGCTGAGCTACCGGCGGTTACGTTTCCCGGACTAGATCTC
TTACAAAAACCGACGAATACTCGTAAACCGCCTCGAAGGAAAACAAACAACTTTGGCGCT
GGAGTGAAGTTGCGGAGAGACATTGGAGGAAATACTCCTAAAGGAAGGAGGAGTAGGCCG
GAAACTCCTCTTCTACGGTGGAAGTTCAACGAGGATATTCATGACAATGGTTCTGTAAAG
GAGGAAACTTCGACGGTGGAGGTTGATCGGAAATGTAGTCGGAATAATGGTAGGACTGTG
GTTTCTGTTAGGAAGTTAGGTGCGGGACTGTTTAGGCAGCAGCAGCTGCCGGAAGTAAAA
AACGGTCAGAAGTTAGGGTTTCAGGCTGGTCGGGTTGAGATGCCCTTTCATTTTCATCAT
CGCAGTAAAGTGCATGACTCTCTCATTAATGATCCAGTGCAGAGTCCTCGGTCTGTCTTT
GGTCCAACTAATGGCCTTTTTCACAAGCTAGAAACCTCACTTCAGTTTTCCCATTCTGCT
ATGGAGGGGGCAACAAAGTGGGATCCAGTTGGCTGGACAACAGCGGTGGAAACAAAGAAG
ATATACGGCTCTCAGAAGCTTCTTGATCAACAAGTGAATACTGCTTCAATGATCTCTTCT
CTTGAGGCAGAACTAGAGTGTGCTCATGCCCGAGCTCATCAACTTGAGACAGAGCGGCAT
TCATCAAAAAAGAAACTCGAGCAGTTTTTGAGGAAACTTAGTGAAGAAAAAGCAGCATGG
CGGAGCAAAGAGCATGAGAAAATTCGTGCAATTATGGATGACATGAAAGCTGACTTCTCC
CGGGAGAGGAAAAACCGGAAGAGGCTGGAAATAGTCAATTCCAAATTAGTTAATGAATTG
GCTGATGCCAAGTTATCAGCAAAACGCTATTTGCAAAATTTTGAAAAAGAAAGACAGGCT
AGAGGGTTGATAGAAGAAGTGTGCGATGAATTGGCCAAAGAACTTGGAGAAGACAAGGCT
GAGGTTGAGGAAATGAAGAGGGAATCTCTGAAGTTCACAGAAGAAGTAGATGAAGAAAGA
AAGATGTTGCAGATGGCTGAGGTTTGGCGTGAGGAACGGGTCCAGATGAAACTAGTTGAT
GCCAAGGTGATGCTTGAAGAAAAGTATTCCCAAATGAACAAGCTTATTGGAGAACTAGAA
TCATTTCTGAATTCTAGAGGTATGAGTTTTGATGTGGAGGAGATGAAAAGAGCTGAGCAA
CTCCAACAGGCCGCTTCCTCTTGTAGCATTCGTGATATTAGAGAACTCACTTATGAACCA
CCAAATCAAGATGATATTCTTTCCGTTTTTGAGGATGTTCATTTTGTTGAACCTGATGAA
AAGGATATCCAGCCATGTACATTTAGTCCTCGCTCTCTCAGTCCTGATGGTGTTGCTTAT
GACTTCCGCAGATATTCACAAGCATATGTCAATCAGAGTGCTAATTTAGAGGAAGAGGGA
AGTGAGTGGGAAACGGTGACCAATGTTGAGGAGCAAGGTTCCAACTATTCTCTTGAAGGA
AGCATTTCATCCGTCAACAAGAATTGCCGGCACAGCAATGTATCAAGAAGTAGAGCAGAC
TCAGAGGGAATTGGTGATGATGTCACATCGGTTTCAGAGATTAGTGAAGTATGTTCTGGA
CCAGCTCGGCAACTTACAGAGTTGTCATCTGCATCGAAACATTGGAAATCACGCCCGTGT
AATGGAGACAATTTCAAAATAAAATCACTAGAAGGAACTAAAGGGAAGCTGTCAAATGGA
AGACTATCTAATGGGGCCATTCTTTCTCCGGATCATGGTTCTAGTAAAGGTGGCTTTAGC
CCCTCAGACCTTGGCCAGGAATGGAGCTCACCTGAGTCTGGCAACTCACAAATAGCACGC
GGGATGAAAGGGTGCATTGAATGGCCGCATAACTCTCAGAAGAAAAGCTTAAAAGCAAAG
TTATTGCAGGCAAGAACAGAGAGCCAGAAGGTCCAGTTGCGCCAGGTCTTGAAGCAGAAG
ATCTGA