Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071663
CDS Infomation

pacid=37447726 polypeptide=PGSC0003DMP400048479 locus=PGSC0003DMG400027877 ID=PGSC0003DMT400071663.v4.03 annot-version=v4.03
Sequence

ATGGGTGTTTGTTTGAGCAAAAGTAAACCAGCAGAGTCGAAGTCTGATGGGCATTATAGA
TCAGGTGGGAGTGATGGGGGCCCAGAAACTCAATTACCCTTGAGGCCTCAAGCAAGTCCT
AAACCAGTTTTCAAGCAAGAAACCATTTTGGGTAAGGCATTTGAGGATGTTAAGGCACAC
TATACACTAGGTAAAGAATTGGGTAGAGGTCAATTTGGGGTTACATTTCTTTGTACTGAA
ATAGCAACTGGTCATCAATATGCTTGTAAGTCAATATCAAAGAAGAAACTTGTTACTAAA
TCTGATAAAGCTGATATGAGAAGAGAGATTCAGATTATGCAGCATTTAAGTGGACAACCA
AATATTGTTGCATTTAAAGGTGCTTATGAGGATATGAATTCAGTGTGTCTTGTTATGGAG
TTGTGTGCTGGTGGAGAGTTATTTGATAGGATCATAGCTAAGGGGCATTATACTGAAAGA
GCTGCTGCATCAATGTGTAGAGCTATTGTTAATGTTGTACATGTTTGCCATTTTATGGGT
GTTATGCATCGTGATCTTAAGCCTGAGAACTTTCTCTTGTCAGACAAGAGTGAAAATGCT
GCTTTGAAGGCAACAGATTTTGGGCTGTCCATGTTCATTGAAGAAGGTAAGGTGTACAAG
GATATAGTTGGGAGTGCTTACTATGTTGCCCCTGAAGTCTTACGGAAGAGTTATGGCAAG
GAAATAGATGTTTGGAGTGCAGGTGTTATGTTGTATATACTACTCAGTGGTGTGCCTCCC
TTTTGGGCAGAAACCGAGAGAGGTATATTTGATGCCATATTAAAAGAAGACATTGACTTT
GAAAGTCAACCTTGGCCCTCTATCACAAGTAGTGCCAAGGACCTGGTCCGAAAGATGCTC
AATAAAGACCCAAAGCAACGTATTTCTGCTGCTCAAGTTCTTGAGCATCCTTGGCTCAAG
GTAGGTGGAGTAGCATCAGATAAACCATTAGATAATGCTGTCCTCTCAAGAATGAAGCAA
TTCAGAGCTATGAACAAACTCAAGAGACTTGCTTTAAAGGTCATTGCTGAGAATCTCTCA
GCAGATGAAATTCTGGGGCTCAAATCAATGTTCCATAACATTGACACCGATAATAGTGGA
ACGATCACGTATGAAGAATTGAAGAGCGGATTGGCCAGACTTGGATCAAAGCTCACAGAG
GCGGAAGTAAAGCAATTGATGGAAGCTGCTGATGTGGATGGAAATGGCTCGATCGACTAT
ATTGAGTTCATCACTGCTACCATGCATAAACATAGACTTGAAAGAGATGAAAATCTATAC
AAAGCATTTCAGTATTTCGATAAAGATGGTAGCGGGTTCATCACAAGAGATGAACTCGAA
ACATCTATGGAAGAGCATGGAATAGGCGATCCAGCTAGTATAAGGGAGATAATATCTGAA
GTAGATGCTGATAATGATGGAAGAATCAACTATGAGGAATTTTGTACAATGATGAGAAGT
GGAGCTAAACAACCAGGCAAGCTCTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048479
PEP Infomation

pacid=37447726 transcript=PGSC0003DMT400071663 locus=PGSC0003DMG400027877 ID=PGSC0003DMT400071663.v4.03 annot-version=v4.03
Sequence

MGVCLSKSKPAESKSDGHYRSGGSDGGPETQLPLRPQASPKPVFKQETILGKAFEDVKAH
YTLGKELGRGQFGVTFLCTEIATGHQYACKSISKKKLVTKSDKADMRREIQIMQHLSGQP
NIVAFKGAYEDMNSVCLVMELCAGGELFDRIIAKGHYTERAAASMCRAIVNVVHVCHFMG
VMHRDLKPENFLLSDKSENAALKATDFGLSMFIEEGKVYKDIVGSAYYVAPEVLRKSYGK
EIDVWSAGVMLYILLSGVPPFWAETERGIFDAILKEDIDFESQPWPSITSSAKDLVRKML
NKDPKQRISAAQVLEHPWLKVGGVASDKPLDNAVLSRMKQFRAMNKLKRLALKVIAENLS
ADEILGLKSMFHNIDTDNSGTITYEELKSGLARLGSKLTEAEVKQLMEAADVDGNGSIDY
IEFITATMHKHRLERDENLYKAFQYFDKDGSGFITRDELETSMEEHGIGDPASIREIISE
VDADNDGRINYEEFCTMMRSGAKQPGKLF*

Transcript Sequence

Transcript ID

PGSC0003DMT400071663
Transcript Infomation

pacid=37447726 locus=PGSC0003DMG400027877 ID=PGSC0003DMT400071663.v4.03 annot-version=v4.03
Sequence

ATGGGTGTTTGTTTGAGCAAAAGTAAACCAGCAGAGTCGAAGTCTGATGGGCATTATAGA
TCAGGTGGGAGTGATGGGGGCCCAGAAACTCAATTACCCTTGAGGCCTCAAGCAAGTCCT
AAACCAGTTTTCAAGCAAGAAACCATTTTGGGTAAGGCATTTGAGGATGTTAAGGCACAC
TATACACTAGGTAAAGAATTGGGTAGAGGTCAATTTGGGGTTACATTTCTTTGTACTGAA
ATAGCAACTGGTCATCAATATGCTTGTAAGTCAATATCAAAGAAGAAACTTGTTACTAAA
TCTGATAAAGCTGATATGAGAAGAGAGATTCAGATTATGCAGCATTTAAGTGGACAACCA
AATATTGTTGCATTTAAAGGTGCTTATGAGGATATGAATTCAGTGTGTCTTGTTATGGAG
TTGTGTGCTGGTGGAGAGTTATTTGATAGGATCATAGCTAAGGGGCATTATACTGAAAGA
GCTGCTGCATCAATGTGTAGAGCTATTGTTAATGTTGTACATGTTTGCCATTTTATGGGT
GTTATGCATCGTGATCTTAAGCCTGAGAACTTTCTCTTGTCAGACAAGAGTGAAAATGCT
GCTTTGAAGGCAACAGATTTTGGGCTGTCCATGTTCATTGAAGAAGGTAAGGTGTACAAG
GATATAGTTGGGAGTGCTTACTATGTTGCCCCTGAAGTCTTACGGAAGAGTTATGGCAAG
GAAATAGATGTTTGGAGTGCAGGTGTTATGTTGTATATACTACTCAGTGGTGTGCCTCCC
TTTTGGGCAGAAACCGAGAGAGGTATATTTGATGCCATATTAAAAGAAGACATTGACTTT
GAAAGTCAACCTTGGCCCTCTATCACAAGTAGTGCCAAGGACCTGGTCCGAAAGATGCTC
AATAAAGACCCAAAGCAACGTATTTCTGCTGCTCAAGTTCTTGAGCATCCTTGGCTCAAG
GTAGGTGGAGTAGCATCAGATAAACCATTAGATAATGCTGTCCTCTCAAGAATGAAGCAA
TTCAGAGCTATGAACAAACTCAAGAGACTTGCTTTAAAGGTCATTGCTGAGAATCTCTCA
GCAGATGAAATTCTGGGGCTCAAATCAATGTTCCATAACATTGACACCGATAATAGTGGA
ACGATCACGTATGAAGAATTGAAGAGCGGATTGGCCAGACTTGGATCAAAGCTCACAGAG
GCGGAAGTAAAGCAATTGATGGAAGCTGCTGATGTGGATGGAAATGGCTCGATCGACTAT
ATTGAGTTCATCACTGCTACCATGCATAAACATAGACTTGAAAGAGATGAAAATCTATAC
AAAGCATTTCAGTATTTCGATAAAGATGGTAGCGGGTTCATCACAAGAGATGAACTCGAA
ACATCTATGGAAGAGCATGGAATAGGCGATCCAGCTAGTATAAGGGAGATAATATCTGAA
GTAGATGCTGATAATGATGGAAGAATCAACTATGAGGAATTTTGTACAATGATGAGAAGT
GGAGCTAAACAACCAGGCAAGCTCTTCTAA