Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071645
CDS Infomation

pacid=37445843 polypeptide=PGSC0003DMP400048465 locus=PGSC0003DMG400027870 ID=PGSC0003DMT400071645.v4.03 annot-version=v4.03
Sequence

ATGGATTCCACCCAAAACGTTCCCCATGATATCATAATCGATATACTCGCACAACTTCCT
GTGAAAGCACTTATAAGGTTTAAAGGTGTTTGCAGATCATGGTATTCGTTAATTAAAGAC
AATAAATTCATCAAACAACACTACGATACTCACAAAAATTGCCAAAAGTACTTTATGACT
TGTAGAAGACGCAATATGAAGAACCAATTCAATTACTACCACTACACCATGGACGTCCCT
CAACTTGATTCTACTAGTACAATCTCTCTTGTCGAATCTCCGGTTCCAATTGATCGATCG
CGAATGGTATTGGGTAACACACAATATTTCTCATGTAATGGAATACTTCTTATAATTACA
TATGCTAATGATATCGTGTTGTGGAACCCAGCCACTAAAGAATCAAGAAGAATCCCTTGT
CCAATTCGGAGTAAGAGTGGTGGTCTTTATAATTTTTGCTACTTTCCGAGTATTGACAGC
TACAAAATATTTAGACTAGGACGTGAAGTTTTTAATGATGACAAAAATGACATGGATATT
GATATATTTTCAACGAAAGGTAACTCGTGGAAATCTGTTGGCATGTTTCCTTCAAATTAT
GATTTCTTAGATAGTAGCATTGTTATGTCAGATGGGATTGTTTATATGATGGCGAAGAGA
ATTGGAAATTTAGTCAGTAGTACAATATTACGTTTTTGTTTGGAGAAAGAACAATTTGAA
GAGGAATTGCTATGTGTGGACACGATACCAGGGAGAATACGTATTTTGTATTCTGTAGGA
GAAAAACTTTGTTTGATTAGTTCATCTGGAGATAATAATGAGGTTCGTGAGATTTGGTTG
TATATGATGACAACAAATTCATGGAGTAAGATATTGACAATTCCGTTAACTTTGAGACCT
TTGAGTTTTATGGAGGATGGAGGCATGATGTTTCAAAAGTTCAATAGATCTGGGTTCGTG
TTCGAGGCTTACAATTCAACAACACACAAATTTGAACAAGTTAATGTAACTGAAATTGAA
GGACTTAACTTATTCAATAGGGTTGTAACCTACGTTGAAACTTTATCCTCTCCTAATTCG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400048465
PEP Infomation

pacid=37445843 transcript=PGSC0003DMT400071645 locus=PGSC0003DMG400027870 ID=PGSC0003DMT400071645.v4.03 annot-version=v4.03
Sequence

MDSTQNVPHDIIIDILAQLPVKALIRFKGVCRSWYSLIKDNKFIKQHYDTHKNCQKYFMT
CRRRNMKNQFNYYHYTMDVPQLDSTSTISLVESPVPIDRSRMVLGNTQYFSCNGILLIIT
YANDIVLWNPATKESRRIPCPIRSKSGGLYNFCYFPSIDSYKIFRLGREVFNDDKNDMDI
DIFSTKGNSWKSVGMFPSNYDFLDSSIVMSDGIVYMMAKRIGNLVSSTILRFCLEKEQFE
EELLCVDTIPGRIRILYSVGEKLCLISSSGDNNEVREIWLYMMTTNSWSKILTIPLTLRP
LSFMEDGGMMFQKFNRSGFVFEAYNSTTHKFEQVNVTEIEGLNLFNRVVTYVETLSSPNS
*

Transcript Sequence

Transcript ID

PGSC0003DMT400071645
Transcript Infomation

pacid=37445843 locus=PGSC0003DMG400027870 ID=PGSC0003DMT400071645.v4.03 annot-version=v4.03
Sequence

ATGGATTCCACCCAAAACGTTCCCCATGATATCATAATCGATATACTCGCACAACTTCCT
GTGAAAGCACTTATAAGGTTTAAAGGTGTTTGCAGATCATGGTATTCGTTAATTAAAGAC
AATAAATTCATCAAACAACACTACGATACTCACAAAAATTGCCAAAAGTACTTTATGACT
TGTAGAAGACGCAATATGAAGAACCAATTCAATTACTACCACTACACCATGGACGTCCCT
CAACTTGATTCTACTAGTACAATCTCTCTTGTCGAATCTCCGGTTCCAATTGATCGATCG
CGAATGGTATTGGGTAACACACAATATTTCTCATGTAATGGAATACTTCTTATAATTACA
TATGCTAATGATATCGTGTTGTGGAACCCAGCCACTAAAGAATCAAGAAGAATCCCTTGT
CCAATTCGGAGTAAGAGTGGTGGTCTTTATAATTTTTGCTACTTTCCGAGTATTGACAGC
TACAAAATATTTAGACTAGGACGTGAAGTTTTTAATGATGACAAAAATGACATGGATATT
GATATATTTTCAACGAAAGGTAACTCGTGGAAATCTGTTGGCATGTTTCCTTCAAATTAT
GATTTCTTAGATAGTAGCATTGTTATGTCAGATGGGATTGTTTATATGATGGCGAAGAGA
ATTGGAAATTTAGTCAGTAGTACAATATTACGTTTTTGTTTGGAGAAAGAACAATTTGAA
GAGGAATTGCTATGTGTGGACACGATACCAGGGAGAATACGTATTTTGTATTCTGTAGGA
GAAAAACTTTGTTTGATTAGTTCATCTGGAGATAATAATGAGGTTCGTGAGATTTGGTTG
TATATGATGACAACAAATTCATGGAGTAAGATATTGACAATTCCGTTAACTTTGAGACCT
TTGAGTTTTATGGAGGATGGAGGCATGATGTTTCAAAAGTTCAATAGATCTGGGTTCGTG
TTCGAGGCTTACAATTCAACAACACACAAATTTGAACAAGTTAATGTAACTGAAATTGAA
GGACTTAACTTATTCAATAGGGTTGTAACCTACGTTGAAACTTTATCCTCTCCTAATTCG
TAA