Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071643
CDS Infomation

pacid=37448170 polypeptide=PGSC0003DMP400048464 locus=PGSC0003DMG400027869 ID=PGSC0003DMT400071643.v4.03 annot-version=v4.03
Sequence

ATGGGTAGAGGATTGGGTTCGCAAAACTTGCCGGCGGACGTCACACAGCTGATCGATCAG
TTAGACCGCCATTGTTTAGCCCATGATGGATCTCTCATCTCCAAATCCGCTCACTACGAT
CTCCAACTTGCGAGAGAAGATATGTCAAAGGAGAGACAACGATACTTGGAATCCTTAGCA
ATATACATTGAAGCAACTGCGATGGTAGAGGATTACCAGCAGGCCATTTCTGTGGCTAAT
CTTGGTGGTATGAGAGATGTCCAGGGTTTATACTCTCAATTGGGCTTGAAAAATCCTCCT
CAGGTTTATGAGGCTCTTGAGCATAGGATGGTTGTTGCAGAAGCAGCACAGAGATTGAGG
CTTCCTCTTATCTCCAAAGACGGTGAGATTCACGAGGAGGAAATTGAAAAATGGAGTATA
ATGTCAAGAAGTTCTTTTGATAGCACAAGCACCAGCATTACATTAAGCTCGAGCTCAAAC
TCAGCTTATCAAACCAACACATCTGCAATTGGAGCTGTTCCTGCAGCGAGCAGTGCTTCT
ACTACTAGTACAACTGATGCAACAGAACCAGATGTTGGTGGTGTTTCCAATCGGTTCCTT
GGAATAACACCTGCATATTTATGGCAAACTCAACTACATCAGATGTCATCAGTGGACGTG
GCAGAATACCAGAGATTGCTTTCACGGGAGATTGGTGGCCGGTTAGATGCTAAATGTGAT
AAGTTAGCTGATGCAGTTGCTATTGATGACATTGATATATCTGCTGCCAGTCAAAATTCA
GCTGCCAGACTTCCAGAGAGGGTGAAGTTGATCACTGAGGAGATTGAGAGAGAAGAAGAA
GCATGGCGTGATGACCTATATTCATCTAACAGAAAATTTGCCGAATACTATAATGTCTTG
GAGCAGATCCTTGGTGTTCTTATTAAGCTTGTCAAAGATATAAAGTTGGACCATCAACAT
AAATATGATGAACTACAAAAGACGTGGCTGTGCAAAAGATGTGAGACCATGAGGGCAAAA
TTAAGAGTTCTGGAACATGTTCTCCTACTTGATACTTATACCCCGGAAACTATTCCCGCC
CTCCACAAAATAAGGAAGTATTTGATTGAAGCAACAGAAGAAGCATCACTTGCATATGAG
AAAGCGGCTTCCCGCCTTCGTGAGTATCAAGGCGTTGATCCTCATTTTGACGAAATTGCT
AGGCAGTACCATGACATTGTGAAGAAATTGGAGAGCATGCAGTGGACCATTAACCAAGTT
GAAATGGACTTGAATCCTTTGCCTGCTCACTCCAGCACCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048464
PEP Infomation

pacid=37448170 transcript=PGSC0003DMT400071643 locus=PGSC0003DMG400027869 ID=PGSC0003DMT400071643.v4.03 annot-version=v4.03
Sequence

MGRGLGSQNLPADVTQLIDQLDRHCLAHDGSLISKSAHYDLQLAREDMSKERQRYLESLA
IYIEATAMVEDYQQAISVANLGGMRDVQGLYSQLGLKNPPQVYEALEHRMVVAEAAQRLR
LPLISKDGEIHEEEIEKWSIMSRSSFDSTSTSITLSSSSNSAYQTNTSAIGAVPAASSAS
TTSTTDATEPDVGGVSNRFLGITPAYLWQTQLHQMSSVDVAEYQRLLSREIGGRLDAKCD
KLADAVAIDDIDISAASQNSAARLPERVKLITEEIEREEEAWRDDLYSSNRKFAEYYNVL
EQILGVLIKLVKDIKLDHQHKYDELQKTWLCKRCETMRAKLRVLEHVLLLDTYTPETIPA
LHKIRKYLIEATEEASLAYEKAASRLREYQGVDPHFDEIARQYHDIVKKLESMQWTINQV
EMDLNPLPAHSST*

Transcript Sequence

Transcript ID

PGSC0003DMT400071643
Transcript Infomation

pacid=37448170 locus=PGSC0003DMG400027869 ID=PGSC0003DMT400071643.v4.03 annot-version=v4.03
Sequence

ATGGGTAGAGGATTGGGTTCGCAAAACTTGCCGGCGGACGTCACACAGCTGATCGATCAG
TTAGACCGCCATTGTTTAGCCCATGATGGATCTCTCATCTCCAAATCCGCTCACTACGAT
CTCCAACTTGCGAGAGAAGATATGTCAAAGGAGAGACAACGATACTTGGAATCCTTAGCA
ATATACATTGAAGCAACTGCGATGGTAGAGGATTACCAGCAGGCCATTTCTGTGGCTAAT
CTTGGTGGTATGAGAGATGTCCAGGGTTTATACTCTCAATTGGGCTTGAAAAATCCTCCT
CAGGTTTATGAGGCTCTTGAGCATAGGATGGTTGTTGCAGAAGCAGCACAGAGATTGAGG
CTTCCTCTTATCTCCAAAGACGGTGAGATTCACGAGGAGGAAATTGAAAAATGGAGTATA
ATGTCAAGAAGTTCTTTTGATAGCACAAGCACCAGCATTACATTAAGCTCGAGCTCAAAC
TCAGCTTATCAAACCAACACATCTGCAATTGGAGCTGTTCCTGCAGCGAGCAGTGCTTCT
ACTACTAGTACAACTGATGCAACAGAACCAGATGTTGGTGGTGTTTCCAATCGGTTCCTT
GGAATAACACCTGCATATTTATGGCAAACTCAACTACATCAGATGTCATCAGTGGACGTG
GCAGAATACCAGAGATTGCTTTCACGGGAGATTGGTGGCCGGTTAGATGCTAAATGTGAT
AAGTTAGCTGATGCAGTTGCTATTGATGACATTGATATATCTGCTGCCAGTCAAAATTCA
GCTGCCAGACTTCCAGAGAGGGTGAAGTTGATCACTGAGGAGATTGAGAGAGAAGAAGAA
GCATGGCGTGATGACCTATATTCATCTAACAGAAAATTTGCCGAATACTATAATGTCTTG
GAGCAGATCCTTGGTGTTCTTATTAAGCTTGTCAAAGATATAAAGTTGGACCATCAACAT
AAATATGATGAACTACAAAAGACGTGGCTGTGCAAAAGATGTGAGACCATGAGGGCAAAA
TTAAGAGTTCTGGAACATGTTCTCCTACTTGATACTTATACCCCGGAAACTATTCCCGCC
CTCCACAAAATAAGGAAGTATTTGATTGAAGCAACAGAAGAAGCATCACTTGCATATGAG
AAAGCGGCTTCCCGCCTTCGTGAGTATCAAGGCGTTGATCCTCATTTTGACGAAATTGCT
AGGCAGTACCATGACATTGTGAAGAAATTGGAGAGCATGCAGTGGACCATTAACCAAGTT
GAAATGGACTTGAATCCTTTGCCTGCTCACTCCAGCACCTAA