Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071609
CDS Infomation

pacid=37475034 polypeptide=PGSC0003DMP400048445 locus=PGSC0003DMG402027859 ID=PGSC0003DMT400071609.v4.03 annot-version=v4.03
Sequence

ATGGAGAGAATTTCACAAAAGGAACATATTTTAGTTGATTATGGTCCACAAAGATCATTT
GAGGGTTCACCAAGTGATATGGACATGGATTTTAACGATGTTTTCGGAGGTCCACCGAGG
CGATTTTCAGTACAAGAAGCAAGAACAAGGCACAGTTTCAATGATTCAGTAGAATCTGAA
GAGGATTCAGCAGGTGTATCGCGAAATTCGTGGAATGGATTCAATGAAAAGCCAGTTTTC
GGGGAAGAAAATGCTAACAGGAGGCGAAATCAAGGTGGTGATTTCTATGATGATATATTT
AAAGTTGAGGAAAAATCTTACAGTTCAAGCCCTGTTCGACCTTTGTCACCAAAAATTGAA
GCTTTTGGTACTTCACTCCCAGCTCAATTCAGCCTTCCTGCCAAGTTGACGAAAGCCACA
GATCTTCCCACATTTGCTTCGGGAAGTCATAGTCCACACAAGAAGCGAGAAAAAGAGATG
AAAAATGATGCTCCTGTATTCTATCGACAAAGTCCATTATCACGTGAAGGTACTGTTATT
GGTGATGATTTAAGATCTATGTCTGAATCCGATGAACGAGATATAGGAGGGCATCTAAAG
AAGAGCGGAGAAAACATGGAAGATTCGAGTAGTGAATATCAATTTCATTTCTCCATATAC
AAGTGGGCAGGCAAAGGAGTTCCTATGCTTGTGTCACTGAAGGGAGGGAAACATTTCAAG
TCTAAAGAGAAGATAAAATTTGAAAAATGTCCTAGCTCCAATGCAAGGATGGAGAAAGAC
AACACGGATACCAGCTCGCCATTAGGTAGAAACGTCAACTTCTCCAGGGATGCAAATTTT
CACTCCTTAAGTACGAGAAGTAAGAAACCTGAGAGCAGTGACAAGGCAAATGGTATTGTT
GGGGAAACTCTCGGCATTCCAAAGTCAAAATCTGTTCAGAGTTTTAAAGATGATGTTGGA
ATCCAGATAGAAATTACAAAGAACTCGGAAGAAACCAAGAAACAAGAGCTGAAGCCTCTA
CGTGCATTTTTAGTTGATGTGGCTGATGAAAAAGGCGACATTAAGATGGCACAAGAAACA
GAAAGGAAGAGTAACACAGTCAAAGCTACGCAAGCAGCAAAAACAAATGTTAAAGTAAAG
GAAAATGTGAAGAAAATTGATGATGAGGCTGATAAGAAGTTGAAGAAAGATGATGTTGAA
GTTAGCGAAAACACACAAAAAAGAGATTCACAAGCTAAGAGAAAAGGGAAGAGAGGTTCT
GATAAAAAAACTGTAGTAGATACAGGAGAAAACAGAAGTAGTCAGCCAAGTTCTCCCATA
AGATCAGCCGAGAATTCTACTAAAGCTGGAATTAAAGGAAAGGTTCAAGACTTTGTAAAG
ATGTTCAACCACGAGGTTCATTCAACTCCCCAAGAAGGCGATAGTAGAAGTAAAAGCTTT
AAATGGAAAGCTAGCAGCAATAGTGGAGTTGAAAGTGAAAAGAGTTATAGCATGCCAAAA
GCAAATGAGAAAGTTCAGTTGCCCACGATTAACAAGACGCAAGATGCAGCCCCTAATGTA
GACAAAAATCTTAACAAGCAGGAGAAAACAACTAAATATTCCCAAAGGAAAACAGAGATT
CCTCGGACTAAAGACTATTCAGATCAAAAGGCCGCTCCATCAATTAATGAGTCAAGACGA
GATGATCGAAAAGTCTCAGTTGGAAGCATGGATGATCTCTTTGGTGGAAATTATGTGGTG
GAAGAATTATTTGAAGATCAGGACACAGCTTCACAAACTAATGGAAAATCTGAGGACAGC
CAAGCTTCAGATGCTAAAATTAAGCAATGGTCACAAGGGAGGAAAGGAAATATTCGTTCA
TTGCTCTCAACATTACAATTAGTTTTATGGCCCGAGAGCGGATGGAAGCCTGTGGCCTTA
ATGGATTTAATGGAAGGAAATCAAGTGAAGAGAGCATATCAGAGAGCGTTACTCTACATA
CATCCAGATAAGCTCCAACAAAAGGGAGCTGCTGCTCACCAGAAATACATTGCAGAAAAA
GTTTTTGATATTCTGCAGGTACCTTATAATTTTGTCAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400048445
PEP Infomation

pacid=37475034 transcript=PGSC0003DMT400071609 locus=PGSC0003DMG402027859 ID=PGSC0003DMT400071609.v4.03 annot-version=v4.03
Sequence

MERISQKEHILVDYGPQRSFEGSPSDMDMDFNDVFGGPPRRFSVQEARTRHSFNDSVESE
EDSAGVSRNSWNGFNEKPVFGEENANRRRNQGGDFYDDIFKVEEKSYSSSPVRPLSPKIE
AFGTSLPAQFSLPAKLTKATDLPTFASGSHSPHKKREKEMKNDAPVFYRQSPLSREGTVI
GDDLRSMSESDERDIGGHLKKSGENMEDSSSEYQFHFSIYKWAGKGVPMLVSLKGGKHFK
SKEKIKFEKCPSSNARMEKDNTDTSSPLGRNVNFSRDANFHSLSTRSKKPESSDKANGIV
GETLGIPKSKSVQSFKDDVGIQIEITKNSEETKKQELKPLRAFLVDVADEKGDIKMAQET
ERKSNTVKATQAAKTNVKVKENVKKIDDEADKKLKKDDVEVSENTQKRDSQAKRKGKRGS
DKKTVVDTGENRSSQPSSPIRSAENSTKAGIKGKVQDFVKMFNHEVHSTPQEGDSRSKSF
KWKASSNSGVESEKSYSMPKANEKVQLPTINKTQDAAPNVDKNLNKQEKTTKYSQRKTEI
PRTKDYSDQKAAPSINESRRDDRKVSVGSMDDLFGGNYVVEELFEDQDTASQTNGKSEDS
QASDAKIKQWSQGRKGNIRSLLSTLQLVLWPESGWKPVALMDLMEGNQVKRAYQRALLYI
HPDKLQQKGAAAHQKYIAEKVFDILQVPYNFVK*

Transcript Sequence

Transcript ID

PGSC0003DMT400071609
Transcript Infomation

pacid=37475034 locus=PGSC0003DMG402027859 ID=PGSC0003DMT400071609.v4.03 annot-version=v4.03
Sequence

ATGGAGAGAATTTCACAAAAGGAACATATTTTAGTTGATTATGGTCCACAAAGATCATTT
GAGGGTTCACCAAGTGATATGGACATGGATTTTAACGATGTTTTCGGAGGTCCACCGAGG
CGATTTTCAGTACAAGAAGCAAGAACAAGGCACAGTTTCAATGATTCAGTAGAATCTGAA
GAGGATTCAGCAGGTGTATCGCGAAATTCGTGGAATGGATTCAATGAAAAGCCAGTTTTC
GGGGAAGAAAATGCTAACAGGAGGCGAAATCAAGGTGGTGATTTCTATGATGATATATTT
AAAGTTGAGGAAAAATCTTACAGTTCAAGCCCTGTTCGACCTTTGTCACCAAAAATTGAA
GCTTTTGGTACTTCACTCCCAGCTCAATTCAGCCTTCCTGCCAAGTTGACGAAAGCCACA
GATCTTCCCACATTTGCTTCGGGAAGTCATAGTCCACACAAGAAGCGAGAAAAAGAGATG
AAAAATGATGCTCCTGTATTCTATCGACAAAGTCCATTATCACGTGAAGGTACTGTTATT
GGTGATGATTTAAGATCTATGTCTGAATCCGATGAACGAGATATAGGAGGGCATCTAAAG
AAGAGCGGAGAAAACATGGAAGATTCGAGTAGTGAATATCAATTTCATTTCTCCATATAC
AAGTGGGCAGGCAAAGGAGTTCCTATGCTTGTGTCACTGAAGGGAGGGAAACATTTCAAG
TCTAAAGAGAAGATAAAATTTGAAAAATGTCCTAGCTCCAATGCAAGGATGGAGAAAGAC
AACACGGATACCAGCTCGCCATTAGGTAGAAACGTCAACTTCTCCAGGGATGCAAATTTT
CACTCCTTAAGTACGAGAAGTAAGAAACCTGAGAGCAGTGACAAGGCAAATGGTATTGTT
GGGGAAACTCTCGGCATTCCAAAGTCAAAATCTGTTCAGAGTTTTAAAGATGATGTTGGA
ATCCAGATAGAAATTACAAAGAACTCGGAAGAAACCAAGAAACAAGAGCTGAAGCCTCTA
CGTGCATTTTTAGTTGATGTGGCTGATGAAAAAGGCGACATTAAGATGGCACAAGAAACA
GAAAGGAAGAGTAACACAGTCAAAGCTACGCAAGCAGCAAAAACAAATGTTAAAGTAAAG
GAAAATGTGAAGAAAATTGATGATGAGGCTGATAAGAAGTTGAAGAAAGATGATGTTGAA
GTTAGCGAAAACACACAAAAAAGAGATTCACAAGCTAAGAGAAAAGGGAAGAGAGGTTCT
GATAAAAAAACTGTAGTAGATACAGGAGAAAACAGAAGTAGTCAGCCAAGTTCTCCCATA
AGATCAGCCGAGAATTCTACTAAAGCTGGAATTAAAGGAAAGGTTCAAGACTTTGTAAAG
ATGTTCAACCACGAGGTTCATTCAACTCCCCAAGAAGGCGATAGTAGAAGTAAAAGCTTT
AAATGGAAAGCTAGCAGCAATAGTGGAGTTGAAAGTGAAAAGAGTTATAGCATGCCAAAA
GCAAATGAGAAAGTTCAGTTGCCCACGATTAACAAGACGCAAGATGCAGCCCCTAATGTA
GACAAAAATCTTAACAAGCAGGAGAAAACAACTAAATATTCCCAAAGGAAAACAGAGATT
CCTCGGACTAAAGACTATTCAGATCAAAAGGCCGCTCCATCAATTAATGAGTCAAGACGA
GATGATCGAAAAGTCTCAGTTGGAAGCATGGATGATCTCTTTGGTGGAAATTATGTGGTG
GAAGAATTATTTGAAGATCAGGACACAGCTTCACAAACTAATGGAAAATCTGAGGACAGC
CAAGCTTCAGATGCTAAAATTAAGCAATGGTCACAAGGGAGGAAAGGAAATATTCGTTCA
TTGCTCTCAACATTACAATTAGTTTTATGGCCCGAGAGCGGATGGAAGCCTGTGGCCTTA
ATGGATTTAATGGAAGGAAATCAAGTGAAGAGAGCATATCAGAGAGCGTTACTCTACATA
CATCCAGATAAGCTCCAACAAAAGGGAGCTGCTGCTCACCAGAAATACATTGCAGAAAAA
GTTTTTGATATTCTGCAGGTACCTTATAATTTTGTCAAGTAG