Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071599
CDS Infomation

pacid=37472181 polypeptide=PGSC0003DMP400048439 locus=PGSC0003DMG400027856 ID=PGSC0003DMT400071599.v4.03 annot-version=v4.03
Sequence

ATGAGATCTATGAATATTGTTGATTCATGGGGTCAAGCTTGTTTAGTTATCAATCAATCT
TTACCCTATAAATCCTTAAATGGAATGATGAAAATCAATCTGAAAAATCGAAGAATTTTG
AAACAAACTTTATCCTATAGACCATTTTCATCTGTAACTGTTTCAGCTATTGCTACCACT
AGAGAAGATGAGAAAGTTGTTAAGGAAGAAGAAGAAGAAGAAGGAGCAAAAATGGAGAAT
GAATTTAATTTCAAGGTTTACGTAGCTGAAAAGGCGATTTCAGTAAATAAAGCTTTGGAT
GAGGCTATAATAGTAAAAGACCCACCTATGATCCATGAAGCAATGCGTTATTCGCTTCTC
GCCGGCGGGAAGAGAGTCCGGCCGATGCTCTGTATCGCCGCCTGTGACCTTGTTGGGGGA
AACCAGGGGAATGCTATGGCGGCTGCTTGTGCTATTGAGATGATACATACTATGTCTCTC
ATTCATGACGATTTGCCCTGTATGGATGACGACGATCTCCGCCGTGGGAAGCCGACGAAT
CATAAAGTGTATGGTGAGGATGTGGCGGTCCTCGCCGGAGATGCGCTCCTTGCTTTCGCA
TTCGAGTACCTCGCTACCGCTACAATCGAAGTTTCTCCGTCGAGGATCCTCGTTGCTGTT
GCCGAATTGGCGAAATCTGTTGGAACTGAAGGGTTAGTAGCTGGACAAGTAGCGGATTTA
GCTTGTACTGGTAACCCTAATGTGGGATTAGAAATGCTCGAATTTATTCACATACACAAA
ACGGCAGCGTTGCTGGAAGCTTCCGTTGTAATCGGAGCAATCCTCGGCGGCGGAGCAGAT
GAAGAAGTGGACAAGTTAAGGAGATTTGCCCGATGCATCGGTTTATTGTTTCAGGTAGTT
GATGATATCCTTGACGTGACAAAGTCGTCGGAGGAGCTTGGAAAAACCGCCGGAAAAGAT
TTGGCGGTGGATAAAACGACATATCCAAAGCTGCTGGGATTGGAAAAGGCTAAGGAATTT
GCGGCGGAGCTCAACGGCGAAGCTAAACAACAGCTGGCGGCGTTTGATTCACACAAAGCT
GCTCCATTGATTGCTTTAGCTGATTACATCGCTTATCGTCAAAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400048439
PEP Infomation

pacid=37472181 transcript=PGSC0003DMT400071599 locus=PGSC0003DMG400027856 ID=PGSC0003DMT400071599.v4.03 annot-version=v4.03
Sequence

MRSMNIVDSWGQACLVINQSLPYKSLNGMMKINLKNRRILKQTLSYRPFSSVTVSAIATT
REDEKVVKEEEEEEGAKMENEFNFKVYVAEKAISVNKALDEAIIVKDPPMIHEAMRYSLL
AGGKRVRPMLCIAACDLVGGNQGNAMAAACAIEMIHTMSLIHDDLPCMDDDDLRRGKPTN
HKVYGEDVAVLAGDALLAFAFEYLATATIEVSPSRILVAVAELAKSVGTEGLVAGQVADL
ACTGNPNVGLEMLEFIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFARCIGLLFQVV
DDILDVTKSSEELGKTAGKDLAVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAFDSHKA
APLIALADYIAYRQN*

Transcript Sequence

Transcript ID

PGSC0003DMT400071599
Transcript Infomation

pacid=37472181 locus=PGSC0003DMG400027856 ID=PGSC0003DMT400071599.v4.03 annot-version=v4.03
Sequence

ATGAGATCTATGAATATTGTTGATTCATGGGGTCAAGCTTGTTTAGTTATCAATCAATCT
TTACCCTATAAATCCTTAAATGGAATGATGAAAATCAATCTGAAAAATCGAAGAATTTTG
AAACAAACTTTATCCTATAGACCATTTTCATCTGTAACTGTTTCAGCTATTGCTACCACT
AGAGAAGATGAGAAAGTTGTTAAGGAAGAAGAAGAAGAAGAAGGAGCAAAAATGGAGAAT
GAATTTAATTTCAAGGTTTACGTAGCTGAAAAGGCGATTTCAGTAAATAAAGCTTTGGAT
GAGGCTATAATAGTAAAAGACCCACCTATGATCCATGAAGCAATGCGTTATTCGCTTCTC
GCCGGCGGGAAGAGAGTCCGGCCGATGCTCTGTATCGCCGCCTGTGACCTTGTTGGGGGA
AACCAGGGGAATGCTATGGCGGCTGCTTGTGCTATTGAGATGATACATACTATGTCTCTC
ATTCATGACGATTTGCCCTGTATGGATGACGACGATCTCCGCCGTGGGAAGCCGACGAAT
CATAAAGTGTATGGTGAGGATGTGGCGGTCCTCGCCGGAGATGCGCTCCTTGCTTTCGCA
TTCGAGTACCTCGCTACCGCTACAATCGAAGTTTCTCCGTCGAGGATCCTCGTTGCTGTT
GCCGAATTGGCGAAATCTGTTGGAACTGAAGGGTTAGTAGCTGGACAAGTAGCGGATTTA
GCTTGTACTGGTAACCCTAATGTGGGATTAGAAATGCTCGAATTTATTCACATACACAAA
ACGGCAGCGTTGCTGGAAGCTTCCGTTGTAATCGGAGCAATCCTCGGCGGCGGAGCAGAT
GAAGAAGTGGACAAGTTAAGGAGATTTGCCCGATGCATCGGTTTATTGTTTCAGGTAGTT
GATGATATCCTTGACGTGACAAAGTCGTCGGAGGAGCTTGGAAAAACCGCCGGAAAAGAT
TTGGCGGTGGATAAAACGACATATCCAAAGCTGCTGGGATTGGAAAAGGCTAAGGAATTT
GCGGCGGAGCTCAACGGCGAAGCTAAACAACAGCTGGCGGCGTTTGATTCACACAAAGCT
GCTCCATTGATTGCTTTAGCTGATTACATCGCTTATCGTCAAAATTAG