Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071544
CDS Infomation

pacid=37439860 polypeptide=PGSC0003DMP400048402 locus=PGSC0003DMG400027833 ID=PGSC0003DMT400071544.v4.03 annot-version=v4.03
Sequence

ATGGCTAAAAAATTAGTCATTGGTAGCATTGCCTCAATTCTTGTGGTGGCTTGTGTTGTT
GCAGCATGTGTCACCATTACCAAAAAGAACGCGAGCGATCCATCAAGTGGTGGTGGTGAT
GGTGCTAGCAATGGTGGTGTTTCAACCTCTACAAAATCTGTTAAAGCAATATGTCAACCT
ACTGATTACAAAGAAACTTGTGAGAAGAGTCTTGCATCAGCCAAGAACACTAGTGACCCA
AAGGAACTTATAAAAGTTGCATTTGAATCAACCATAACTGACATAAAAAATGCCATAAAA
AATACTGACTTGATCAAGGATGCAGCCAAAGATCCTAGAACCAAAGAGGCTCTACATACT
TGTGAAGGTCTTCTTGATGTGTCTATTGATGATCTAAGAAGATCATTCGATAAAGTTGGC
ACCTTTGATATCAACAAGATCAAGGATTATACCGATGATCTAAAAACATGGATCAGTGCT
TCGATTACTTATCAAGAAACTTGCTTAGATGCTTTTCAGAACACAAGTGGTGACACTGGT
GAGAAAATGAAGAAATTGTTAAAAACTGCAGGGGAGCTTACTAGCAATGGTCTTGCTATG
ATTACTAGCTTTGGTGACATGCTTACTAGCATGAACATCCCTGGTATTAGCCGCCGATTA
TTGGCAAATGACTACACATCATTCGTTGAAGACGGTTCACGTAGGCTTCTTCAAGTTTCA
AGTACCAAGCCTAATGCTGTGGTTGCTCTAGATGGCAGTGGACAATTCAAGACCATCAAA
GAAGCCCTTAAAGGTGTGCCCCCAAAGAACATTCAACCCTATGTCATCTTAATCAAGGCA
GGTGAATATAAGGAGATTGTCGATGTCCCAAGAGGGGTGACAAACGTTGTGTTTATTGGC
GAAGGCCCAACCAAGACCAAGATTACTGGCAACAAGAACTATGCTGATGGCACTGCCACT
TTCCATACCGCCACCGTTGCCGTGAACGGAGATGGTTTCGTAGCAAGGGATATCGGGTTT
GAGAACACAGCAGGAGCAATGAAGCACCAAGCCGTTGCACTCCGTGTATCAGCAGACAAG
GCAGTTTTCTACAACTGCAACATTGATGGATACCAAGACACTCTATACACACATTCCTAC
AGACAATTCTACAAAGATTGTTCCATCTCAGGAACCATCGACTTCATCTTTGGCGATGCA
TCTGCCGTGTTCCAAAACTGTAAGATGATTGTAAGGAAACCAGGTAACAACCAAGCTTGT
ATGGTCACTGCTCAAGGTAGAAAAGACCATCGTGGGGTCGGTGCAATCGTTTTGAGGAAC
TGTGAAATCAGGGCTGAGCCAGCATTCACTAGCACTCAGCCACCAATCAAAGCCTATCTT
GGACGACCATGGAAGGAGTATTCCAGGACAATTATAATGCAAACTCAGATAGACGCGTTC
ATTGATCCTGAAGGATGGGCTCCATGGAATGGTAACTTTGCTCTAAACACTCTGTACTAT
GCAGAGTATCAGAACAGGGGACCAGGAGCAAATACTGACAAAAGGGTTAAATGGGCTGGT
TATAAGAGAAACATTTCACCACAGGAAGCTGAAAAATATGCTCCTAATATCTTCATTGAT
CAAGATAGCTGGATTAAGAAGACTGGCATTTCCTATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400048402
PEP Infomation

pacid=37439860 transcript=PGSC0003DMT400071544 locus=PGSC0003DMG400027833 ID=PGSC0003DMT400071544.v4.03 annot-version=v4.03
Sequence

MAKKLVIGSIASILVVACVVAACVTITKKNASDPSSGGGDGASNGGVSTSTKSVKAICQP
TDYKETCEKSLASAKNTSDPKELIKVAFESTITDIKNAIKNTDLIKDAAKDPRTKEALHT
CEGLLDVSIDDLRRSFDKVGTFDINKIKDYTDDLKTWISASITYQETCLDAFQNTSGDTG
EKMKKLLKTAGELTSNGLAMITSFGDMLTSMNIPGISRRLLANDYTSFVEDGSRRLLQVS
STKPNAVVALDGSGQFKTIKEALKGVPPKNIQPYVILIKAGEYKEIVDVPRGVTNVVFIG
EGPTKTKITGNKNYADGTATFHTATVAVNGDGFVARDIGFENTAGAMKHQAVALRVSADK
AVFYNCNIDGYQDTLYTHSYRQFYKDCSISGTIDFIFGDASAVFQNCKMIVRKPGNNQAC
MVTAQGRKDHRGVGAIVLRNCEIRAEPAFTSTQPPIKAYLGRPWKEYSRTIIMQTQIDAF
IDPEGWAPWNGNFALNTLYYAEYQNRGPGANTDKRVKWAGYKRNISPQEAEKYAPNIFID
QDSWIKKTGISY*

Transcript Sequence

Transcript ID

PGSC0003DMT400071544
Transcript Infomation

pacid=37439860 locus=PGSC0003DMG400027833 ID=PGSC0003DMT400071544.v4.03 annot-version=v4.03
Sequence

ATGGCTAAAAAATTAGTCATTGGTAGCATTGCCTCAATTCTTGTGGTGGCTTGTGTTGTT
GCAGCATGTGTCACCATTACCAAAAAGAACGCGAGCGATCCATCAAGTGGTGGTGGTGAT
GGTGCTAGCAATGGTGGTGTTTCAACCTCTACAAAATCTGTTAAAGCAATATGTCAACCT
ACTGATTACAAAGAAACTTGTGAGAAGAGTCTTGCATCAGCCAAGAACACTAGTGACCCA
AAGGAACTTATAAAAGTTGCATTTGAATCAACCATAACTGACATAAAAAATGCCATAAAA
AATACTGACTTGATCAAGGATGCAGCCAAAGATCCTAGAACCAAAGAGGCTCTACATACT
TGTGAAGGTCTTCTTGATGTGTCTATTGATGATCTAAGAAGATCATTCGATAAAGTTGGC
ACCTTTGATATCAACAAGATCAAGGATTATACCGATGATCTAAAAACATGGATCAGTGCT
TCGATTACTTATCAAGAAACTTGCTTAGATGCTTTTCAGAACACAAGTGGTGACACTGGT
GAGAAAATGAAGAAATTGTTAAAAACTGCAGGGGAGCTTACTAGCAATGGTCTTGCTATG
ATTACTAGCTTTGGTGACATGCTTACTAGCATGAACATCCCTGGTATTAGCCGCCGATTA
TTGGCAAATGACTACACATCATTCGTTGAAGACGGTTCACGTAGGCTTCTTCAAGTTTCA
AGTACCAAGCCTAATGCTGTGGTTGCTCTAGATGGCAGTGGACAATTCAAGACCATCAAA
GAAGCCCTTAAAGGTGTGCCCCCAAAGAACATTCAACCCTATGTCATCTTAATCAAGGCA
GGTGAATATAAGGAGATTGTCGATGTCCCAAGAGGGGTGACAAACGTTGTGTTTATTGGC
GAAGGCCCAACCAAGACCAAGATTACTGGCAACAAGAACTATGCTGATGGCACTGCCACT
TTCCATACCGCCACCGTTGCCGTGAACGGAGATGGTTTCGTAGCAAGGGATATCGGGTTT
GAGAACACAGCAGGAGCAATGAAGCACCAAGCCGTTGCACTCCGTGTATCAGCAGACAAG
GCAGTTTTCTACAACTGCAACATTGATGGATACCAAGACACTCTATACACACATTCCTAC
AGACAATTCTACAAAGATTGTTCCATCTCAGGAACCATCGACTTCATCTTTGGCGATGCA
TCTGCCGTGTTCCAAAACTGTAAGATGATTGTAAGGAAACCAGGTAACAACCAAGCTTGT
ATGGTCACTGCTCAAGGTAGAAAAGACCATCGTGGGGTCGGTGCAATCGTTTTGAGGAAC
TGTGAAATCAGGGCTGAGCCAGCATTCACTAGCACTCAGCCACCAATCAAAGCCTATCTT
GGACGACCATGGAAGGAGTATTCCAGGACAATTATAATGCAAACTCAGATAGACGCGTTC
ATTGATCCTGAAGGATGGGCTCCATGGAATGGTAACTTTGCTCTAAACACTCTGTACTAT
GCAGAGTATCAGAACAGGGGACCAGGAGCAAATACTGACAAAAGGGTTAAATGGGCTGGT
TATAAGAGAAACATTTCACCACAGGAAGCTGAAAAATATGCTCCTAATATCTTCATTGAT
CAAGATAGCTGGATTAAGAAGACTGGCATTTCCTATTGA