Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071458
CDS Infomation

pacid=37464495 polypeptide=PGSC0003DMP400048346 locus=PGSC0003DMG400027803 ID=PGSC0003DMT400071458.v4.03 annot-version=v4.03
Sequence

ATGGGCTGCATTTGCTCAAAGGGTTCTTCCGAAGATGAATATGTTTTCGAACAAAAAGAA
GTTGATAAATCTTCTGTACATATGGTTGCTCCCTTGCATAGAGAGGAGATTAAAGTAGAC
TTAGTTAATCCTAAGATTGAAATAATACCTATGAATTCTAAATCAAAGCGGACATCAGAA
TCTGCTCTTATTTCTGTCCTTGCAACAAAAGTTGAGGATGATGGAAAAACAAGAATTATC
GAGAGGCCTAAGGAAGGCCATCACAAGAGGCGCTCCACCGTTGATTTTGGAGTGCAACAA
TCAATGTCTAGAGTTGTAAGCATACCTAATGCTGCAAAGGGTGAATTCGGAGCTGCAGGA
TGGCCATCGTGGCTTACTTCTGTCGCAGCTGAGGCTATTCAAGGGTGGCTTCCTCGAAGT
GCAGACTCATTTGAAAAATTAAATAAAATTGGTCAAGGAACATACAGTAGTGTGTACAAG
GCCCGTGACCTTAAAACCAATAAAATTGTTGCAATGAAGAAAGTGAGATTTGTCAATATG
GATCCAGAGAGTGTTCGCTTTATGGCAAGGGAAATATCTATTTTGCGTAAATTGGACCAC
CCAAATGTTATGAAACTTGAGGCTTTGGTCACATCTAGAATATCAGGCAGCTTATATCTT
GTATTTGAATACATGGAACACGATCTTGCTGGACTTGCAGCAGCACCTCGGGTTAAGTTT
ACTGAAGCACAGATTAAATGTTATATGCAACAATTACTTCGTGGACTTGAACACTGTCAT
AGCCGGGGTGTACTTCATCGAGACATTAAGGGTTCAAACCTTCTCATTGATGATAATGGT
GTTCTAAAGATTGGAGACTTTGGCTTGGCTACAACCTTTGAGCCCAACCAAACACAGCCA
TTAACAAGTCGTGTTGTAACTCTATGGTATAGAGCTCCTGAGCTTTTGCTTGGTGCAACG
GAATATGGAGTGGCCATAGATATGTGGAGTGCTGGCTGCATCCTCGCTGAATTATCTGCT
GGAAAGCCTATCATGCCTGGAAGAACGGAGGTGGAGCAAATGCATAAGATTTTCAAACTT
TGTGGTTCACCTTCCGAAGAATACTGGAAGAAATCAAAACTACCTCATGCTACTAGCTTT
AAGCCACAACACCCATACAAGCGATGTGTCACTGATACATTCAAGGACTTTCCGCCTTCA
GCTTTGGCCCTTGTTGACATCCTACTTTCAATAGAACCAGAAAGGCGTGGTACTGCTTAT
TCTGCACTCAACAGTGAGTTCTTCAGTACAAAGCCCTTACCTTGTGATCCATCTAGTTTA
CCCAAATATCCTCCAAGCAAGGAATATGATGCTAAGATTCGAGAAGAGGAAGCAAGAAGG
CGGAAAGCTGAGAGTGTTAAAGGATGTGGAGATGAATCATTGAGCAAGTCGTCAAGGCAA
TCAAAGGGAGAAAGTACTACAGAATCCATTTCTGGGCAGGGACAATCAAATATCAGCATC
AGTGTTAAATATAATCCTCTAGAAGAAAGTGGAAGTGGATTCCTTATTGAGCCACCAAGA
GTGAAAAATAGGAACGGATTTATTCATTCAACTTCAGTGATCCATCCTAATGCAGCTGGA
TATTCTCGCAAAGTCAAAGAGGATTCATGTACATCCCAACACGGTGGAGAGTTTCTAAGA
CAGGGTTCTCACACGTCTCGAGCTGTAGGAGACTTTTCAAGTGTTCATTCAAAGAGGGAT
GACGGGTCATCTTATGGGGATTCAACGGTTTATGTGCCAAAGAAAAGTAGACTTCTTTGC
TCTGGACCACTAGTGCCACCAGGGGGAAGTATGGAAGACATGTTAAAGGAACATGAGAGA
CAAATCCAAGAAGCTGTTCGAAAAGCACGTCTAGAAAAAGGAAGGACCAAAAAGAATTGT
TATGATTATGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400048346
PEP Infomation

pacid=37464495 transcript=PGSC0003DMT400071458 locus=PGSC0003DMG400027803 ID=PGSC0003DMT400071458.v4.03 annot-version=v4.03
Sequence

MGCICSKGSSEDEYVFEQKEVDKSSVHMVAPLHREEIKVDLVNPKIEIIPMNSKSKRTSE
SALISVLATKVEDDGKTRIIERPKEGHHKRRSTVDFGVQQSMSRVVSIPNAAKGEFGAAG
WPSWLTSVAAEAIQGWLPRSADSFEKLNKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNM
DPESVRFMAREISILRKLDHPNVMKLEALVTSRISGSLYLVFEYMEHDLAGLAAAPRVKF
TEAQIKCYMQQLLRGLEHCHSRGVLHRDIKGSNLLIDDNGVLKIGDFGLATTFEPNQTQP
LTSRVVTLWYRAPELLLGATEYGVAIDMWSAGCILAELSAGKPIMPGRTEVEQMHKIFKL
CGSPSEEYWKKSKLPHATSFKPQHPYKRCVTDTFKDFPPSALALVDILLSIEPERRGTAY
SALNSEFFSTKPLPCDPSSLPKYPPSKEYDAKIREEEARRRKAESVKGCGDESLSKSSRQ
SKGESTTESISGQGQSNISISVKYNPLEESGSGFLIEPPRVKNRNGFIHSTSVIHPNAAG
YSRKVKEDSCTSQHGGEFLRQGSHTSRAVGDFSSVHSKRDDGSSYGDSTVYVPKKSRLLC
SGPLVPPGGSMEDMLKEHERQIQEAVRKARLEKGRTKKNCYDYD*

Transcript Sequence

Transcript ID

PGSC0003DMT400071458
Transcript Infomation

pacid=37464495 locus=PGSC0003DMG400027803 ID=PGSC0003DMT400071458.v4.03 annot-version=v4.03
Sequence

ATGGGCTGCATTTGCTCAAAGGGTTCTTCCGAAGATGAATATGTTTTCGAACAAAAAGAA
GTTGATAAATCTTCTGTACATATGGTTGCTCCCTTGCATAGAGAGGAGATTAAAGTAGAC
TTAGTTAATCCTAAGATTGAAATAATACCTATGAATTCTAAATCAAAGCGGACATCAGAA
TCTGCTCTTATTTCTGTCCTTGCAACAAAAGTTGAGGATGATGGAAAAACAAGAATTATC
GAGAGGCCTAAGGAAGGCCATCACAAGAGGCGCTCCACCGTTGATTTTGGAGTGCAACAA
TCAATGTCTAGAGTTGTAAGCATACCTAATGCTGCAAAGGGTGAATTCGGAGCTGCAGGA
TGGCCATCGTGGCTTACTTCTGTCGCAGCTGAGGCTATTCAAGGGTGGCTTCCTCGAAGT
GCAGACTCATTTGAAAAATTAAATAAAATTGGTCAAGGAACATACAGTAGTGTGTACAAG
GCCCGTGACCTTAAAACCAATAAAATTGTTGCAATGAAGAAAGTGAGATTTGTCAATATG
GATCCAGAGAGTGTTCGCTTTATGGCAAGGGAAATATCTATTTTGCGTAAATTGGACCAC
CCAAATGTTATGAAACTTGAGGCTTTGGTCACATCTAGAATATCAGGCAGCTTATATCTT
GTATTTGAATACATGGAACACGATCTTGCTGGACTTGCAGCAGCACCTCGGGTTAAGTTT
ACTGAAGCACAGATTAAATGTTATATGCAACAATTACTTCGTGGACTTGAACACTGTCAT
AGCCGGGGTGTACTTCATCGAGACATTAAGGGTTCAAACCTTCTCATTGATGATAATGGT
GTTCTAAAGATTGGAGACTTTGGCTTGGCTACAACCTTTGAGCCCAACCAAACACAGCCA
TTAACAAGTCGTGTTGTAACTCTATGGTATAGAGCTCCTGAGCTTTTGCTTGGTGCAACG
GAATATGGAGTGGCCATAGATATGTGGAGTGCTGGCTGCATCCTCGCTGAATTATCTGCT
GGAAAGCCTATCATGCCTGGAAGAACGGAGGTGGAGCAAATGCATAAGATTTTCAAACTT
TGTGGTTCACCTTCCGAAGAATACTGGAAGAAATCAAAACTACCTCATGCTACTAGCTTT
AAGCCACAACACCCATACAAGCGATGTGTCACTGATACATTCAAGGACTTTCCGCCTTCA
GCTTTGGCCCTTGTTGACATCCTACTTTCAATAGAACCAGAAAGGCGTGGTACTGCTTAT
TCTGCACTCAACAGTGAGTTCTTCAGTACAAAGCCCTTACCTTGTGATCCATCTAGTTTA
CCCAAATATCCTCCAAGCAAGGAATATGATGCTAAGATTCGAGAAGAGGAAGCAAGAAGG
CGGAAAGCTGAGAGTGTTAAAGGATGTGGAGATGAATCATTGAGCAAGTCGTCAAGGCAA
TCAAAGGGAGAAAGTACTACAGAATCCATTTCTGGGCAGGGACAATCAAATATCAGCATC
AGTGTTAAATATAATCCTCTAGAAGAAAGTGGAAGTGGATTCCTTATTGAGCCACCAAGA
GTGAAAAATAGGAACGGATTTATTCATTCAACTTCAGTGATCCATCCTAATGCAGCTGGA
TATTCTCGCAAAGTCAAAGAGGATTCATGTACATCCCAACACGGTGGAGAGTTTCTAAGA
CAGGGTTCTCACACGTCTCGAGCTGTAGGAGACTTTTCAAGTGTTCATTCAAAGAGGGAT
GACGGGTCATCTTATGGGGATTCAACGGTTTATGTGCCAAAGAAAAGTAGACTTCTTTGC
TCTGGACCACTAGTGCCACCAGGGGGAAGTATGGAAGACATGTTAAAGGAACATGAGAGA
CAAATCCAAGAAGCTGTTCGAAAAGCACGTCTAGAAAAAGGAAGGACCAAAAAGAATTGT
TATGATTATGACTAG