Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071445
CDS Infomation

pacid=37467448 polypeptide=PGSC0003DMP400048338 locus=PGSC0003DMG400027797 ID=PGSC0003DMT400071445.v4.03 annot-version=v4.03
Sequence

ATGGGTAATTTATACTCACCACGTTATGAAGTTTTCTTGAATTTTAGGGGAAAAGATGTG
CGCAAAACATTTTTAGATCATCTCTATAAAGCATTATGTGATGTTGAAATTAATGTGTTT
AGAGATGATGATGAACTTCCAAGAGGCGAGGACATTTCACGGAGTTTACATGAAGCAATT
GAAGAGTCAATAATTTCTCTTGTTGTTTTCTCCAAGAGTTATGCCTCATCTAAATGGTGT
CTTAATGAGTTGGTCAAAATTCTTGAATGTAAAGAAAATTTTGGGCAGTTCATTTATCCT
ATATTTTATGATGTTGATCCTTCTGAAGTACGCCATCAAACTGCGCAAATTGGTGATTCT
CTTGCTAAACATGAATTAAATACGAGTCCAGAACAGTTGTGGAAGTGGAGAGCTGCACTT
ACTGCGGTTGCAAGTTTATCTGGATTTCATCTTCCAAATCTTTTTAACGGTCATGAAGCA
AAATTCATTGAGGTGATTATCCAGGAGGTATTGCGTAAATTAAACCACAAATATATAGAC
ATTGCAAGGCATCCCGTAGGAATTAATTCTCGTGTCAGTAAACTGATAAATAAGTTGGCA
TGGACGAGGGCAAGCGATGCCATATATGTTGGAATCTGGGGAGTGGGAGGTGTTGGTAAA
ACTACCTTAGCAAAAGCCATCTTCAACCATATTTCTCCAAATTTTGATGGTAGCTCCTTT
CTTGATGTTGGATCACAAGTTTCAAGGAGGGATATCGGTTTGGTTGCTTTGCAAGAAAAG
CTTCTCAAGGATACTCTCAGGGAAAAAATTGAAGTCAGCTGTGTCGACCATGGAATTCAC
TTGATTAAACAAAGGCTTCAATCAAAAAAAGTTCTCATTGTCCTTGATGACGTTGCTGAT
GTTGAAAAAATATACTCATTAGCAGGAGGGAAGCACTGGTTTGGTCCTGGCAGTAGAATT
ATCATTACCACCAGGGACGAACACTTGCTGAAATGTTCCACAGGTGATGTAAAATATGAG
GTCAAGTGTATGACCGAAAGTGAAAGTCTACAGCTTTTCTGTTGGCATGCTTTCAAGAAT
CCCCTCCCTCCAGAAGACTTTGTGGAGATCTCTGAAAGTCTGGTAACATATGCACAAGGG
CTTCCATTAGCACTTGAAGTTTGGGGATCCTTTTTATATAGAAGAAGCATGGTAGAGTGG
AAAAGTTTCATTGAGAGATTGAAGCAAATCCCTCACGATTCGATAGTAGAGAAACTGAGA
ATAAGCTATGATGGTCTCCCTGATCATTCAACTAAGGAAACATTCCTTGATATCGCATGT
TTCTTGGAAGGATGGGACAAGGAAGATGTTTCTAAAGTCCTCAGCAGTTGCGGTTTCTTC
CCTGAAATCGGAATTAATGTCTTGATCGAGAAGAGTTTAGCAACAATAAATGAATCCAAT
CAACTGAGCTTGCATAATCTGATTAGAGATATGGGAAGAGAAATTGTTCGTAGAGAATCC
AAATATCCAGGTGACCGTAGCAGATTGTGGGATCCTGATGATATTCGTGATTTGATTACT
AGGCACAAGGGAGGGGAAAAAGTTGAGGCATTGAAGCTAGAAGAACCAGTATTTAAGGAC
ATGCGTGTGAGTACAAAAGGATTTTCAAAAATGAAGAACCTGAGACTACTCCAGATTGAT
CATCTTCCTCTTGAAGGGAGCTTCAAGGACATGTTTACAGAGCTTAGAGTGTTAAAATGG
CATCATTGCCATTTGGAACACTTCCCATCGGATTTGCATCCGGACAAACTTGTTATTTTG
GATGTGAAATACAGTAGCCTCAAAGAACCCCCTAGTACAAAGCACTTAAGGTGTTTGAAG
ATAATGGATCTGAGCTATTGTGAGAGCCTAATGAGAACTTCAGACTTCACTGGTTCACCA
ATGCTTGAGAAACTAGTTTTTAGAGGTTGTTCGAGTTTGACTGAGGTGCATTCATCAATT
GGATATTTGGAGGTTCTCGTGTATTTAGATTTCACTGGGTGTAAGAAACTCGAGGGACTA
CCTGATAGCATCTGCAAGCTGAAATCGCTCGAGAAGCTATATCTGAGTGATTGTACAAAT
CTACAACAATTGCCTGCTGACATGGGGAATCTTAGGCGTTTGACGGCACTTTATGTAATG
GGAACATCTATTAAACAACTTCCAGTGTCTTTTGGACTTCTGAAGAATCTTCAACTCTTG
GAAGTGGGAAATGACTGGAAACTTTCAGAACCTAAATCTCTTCTTTCCATCATTTCATCC
TTTTTAACATCAAAAGATCATGATATTCTTCCATCTTCTATTATAAATTTACCGTCCTTG
GAAGTTCTAAAAGTTCCTTTCTTCAATCTGTGCCAAAGAGATATTCCCAATTGTCTTGGC
CGATTATTCTCACTGCAAGTCTTAGATTTAAGTGGAAATAATTTTCACAGCCTACCCTTC
ACTCTTAGTCACCTATCCAACCTAAAAACCCTTAGACTCTATGGATGCCCAAATCTCCTT
ATGCTCCCAGATCTTCCTTGTAACCTAGAAGAACTATGCACAAGGAATTGCAGGTCACTA
GAAATGCTTCCAGATTTGTCAAGTGCAAACAGATTGCAACTGTTGGATTTCTGTGATTGC
AGTAAATTGATTGAGATTCGGGGCCTTGAGAACCTTAAATACTTGAAGTATATGAATGCA
ATAGGTTGTATGCTCACAAAAAATCCTCTATCTGAAGGCTTCTTCAAGGCAAATTCTGCA
CCCAATGGCGTAAATGTTTTTCTTCACTGCAATGAGATTCCTAGTTGGTTCGGCTATCGG
GTTGTGGGATCTTCAATATCTTTGATTGTGCCACGATACATGGAACAAGAATTTCTTGGC
ATGATTGTTTGGGCTATTTGTGAATCTCAAGGAGAACATTGTGATGGAACCCCCATTGCC
ATCATCACCGACCTGACAAATGGGATTGAATATCCTCTTTTTGGTGTAGATATTGCAATA
CGGTATGAGAGTTATGCATGGGTGAGCTATATGCCAAGACGACATTTCAAACGCCCAATA
AAAGGCGGTGAGAAAATGATGGTTTCTATCAAAGAGCGTCATTCATCAAAAGAAGGTTTA
AGAAAGAAGTTTGGGGTTCATCTTTTGTTTGCAACCAGCCCAAAAGGAAAGTTATTTCTT
TTGAGCAGATTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400048338
PEP Infomation

pacid=37467448 transcript=PGSC0003DMT400071445 locus=PGSC0003DMG400027797 ID=PGSC0003DMT400071445.v4.03 annot-version=v4.03
Sequence

MGNLYSPRYEVFLNFRGKDVRKTFLDHLYKALCDVEINVFRDDDELPRGEDISRSLHEAI
EESIISLVVFSKSYASSKWCLNELVKILECKENFGQFIYPIFYDVDPSEVRHQTAQIGDS
LAKHELNTSPEQLWKWRAALTAVASLSGFHLPNLFNGHEAKFIEVIIQEVLRKLNHKYID
IARHPVGINSRVSKLINKLAWTRASDAIYVGIWGVGGVGKTTLAKAIFNHISPNFDGSSF
LDVGSQVSRRDIGLVALQEKLLKDTLREKIEVSCVDHGIHLIKQRLQSKKVLIVLDDVAD
VEKIYSLAGGKHWFGPGSRIIITTRDEHLLKCSTGDVKYEVKCMTESESLQLFCWHAFKN
PLPPEDFVEISESLVTYAQGLPLALEVWGSFLYRRSMVEWKSFIERLKQIPHDSIVEKLR
ISYDGLPDHSTKETFLDIACFLEGWDKEDVSKVLSSCGFFPEIGINVLIEKSLATINESN
QLSLHNLIRDMGREIVRRESKYPGDRSRLWDPDDIRDLITRHKGGEKVEALKLEEPVFKD
MRVSTKGFSKMKNLRLLQIDHLPLEGSFKDMFTELRVLKWHHCHLEHFPSDLHPDKLVIL
DVKYSSLKEPPSTKHLRCLKIMDLSYCESLMRTSDFTGSPMLEKLVFRGCSSLTEVHSSI
GYLEVLVYLDFTGCKKLEGLPDSICKLKSLEKLYLSDCTNLQQLPADMGNLRRLTALYVM
GTSIKQLPVSFGLLKNLQLLEVGNDWKLSEPKSLLSIISSFLTSKDHDILPSSIINLPSL
EVLKVPFFNLCQRDIPNCLGRLFSLQVLDLSGNNFHSLPFTLSHLSNLKTLRLYGCPNLL
MLPDLPCNLEELCTRNCRSLEMLPDLSSANRLQLLDFCDCSKLIEIRGLENLKYLKYMNA
IGCMLTKNPLSEGFFKANSAPNGVNVFLHCNEIPSWFGYRVVGSSISLIVPRYMEQEFLG
MIVWAICESQGEHCDGTPIAIITDLTNGIEYPLFGVDIAIRYESYAWVSYMPRRHFKRPI
KGGEKMMVSIKERHSSKEGLRKKFGVHLLFATSPKGKLFLLSRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400071445
Transcript Infomation

pacid=37467448 locus=PGSC0003DMG400027797 ID=PGSC0003DMT400071445.v4.03 annot-version=v4.03
Sequence

ATGGGTAATTTATACTCACCACGTTATGAAGTTTTCTTGAATTTTAGGGGAAAAGATGTG
CGCAAAACATTTTTAGATCATCTCTATAAAGCATTATGTGATGTTGAAATTAATGTGTTT
AGAGATGATGATGAACTTCCAAGAGGCGAGGACATTTCACGGAGTTTACATGAAGCAATT
GAAGAGTCAATAATTTCTCTTGTTGTTTTCTCCAAGAGTTATGCCTCATCTAAATGGTGT
CTTAATGAGTTGGTCAAAATTCTTGAATGTAAAGAAAATTTTGGGCAGTTCATTTATCCT
ATATTTTATGATGTTGATCCTTCTGAAGTACGCCATCAAACTGCGCAAATTGGTGATTCT
CTTGCTAAACATGAATTAAATACGAGTCCAGAACAGTTGTGGAAGTGGAGAGCTGCACTT
ACTGCGGTTGCAAGTTTATCTGGATTTCATCTTCCAAATCTTTTTAACGGTCATGAAGCA
AAATTCATTGAGGTGATTATCCAGGAGGTATTGCGTAAATTAAACCACAAATATATAGAC
ATTGCAAGGCATCCCGTAGGAATTAATTCTCGTGTCAGTAAACTGATAAATAAGTTGGCA
TGGACGAGGGCAAGCGATGCCATATATGTTGGAATCTGGGGAGTGGGAGGTGTTGGTAAA
ACTACCTTAGCAAAAGCCATCTTCAACCATATTTCTCCAAATTTTGATGGTAGCTCCTTT
CTTGATGTTGGATCACAAGTTTCAAGGAGGGATATCGGTTTGGTTGCTTTGCAAGAAAAG
CTTCTCAAGGATACTCTCAGGGAAAAAATTGAAGTCAGCTGTGTCGACCATGGAATTCAC
TTGATTAAACAAAGGCTTCAATCAAAAAAAGTTCTCATTGTCCTTGATGACGTTGCTGAT
GTTGAAAAAATATACTCATTAGCAGGAGGGAAGCACTGGTTTGGTCCTGGCAGTAGAATT
ATCATTACCACCAGGGACGAACACTTGCTGAAATGTTCCACAGGTGATGTAAAATATGAG
GTCAAGTGTATGACCGAAAGTGAAAGTCTACAGCTTTTCTGTTGGCATGCTTTCAAGAAT
CCCCTCCCTCCAGAAGACTTTGTGGAGATCTCTGAAAGTCTGGTAACATATGCACAAGGG
CTTCCATTAGCACTTGAAGTTTGGGGATCCTTTTTATATAGAAGAAGCATGGTAGAGTGG
AAAAGTTTCATTGAGAGATTGAAGCAAATCCCTCACGATTCGATAGTAGAGAAACTGAGA
ATAAGCTATGATGGTCTCCCTGATCATTCAACTAAGGAAACATTCCTTGATATCGCATGT
TTCTTGGAAGGATGGGACAAGGAAGATGTTTCTAAAGTCCTCAGCAGTTGCGGTTTCTTC
CCTGAAATCGGAATTAATGTCTTGATCGAGAAGAGTTTAGCAACAATAAATGAATCCAAT
CAACTGAGCTTGCATAATCTGATTAGAGATATGGGAAGAGAAATTGTTCGTAGAGAATCC
AAATATCCAGGTGACCGTAGCAGATTGTGGGATCCTGATGATATTCGTGATTTGATTACT
AGGCACAAGGGAGGGGAAAAAGTTGAGGCATTGAAGCTAGAAGAACCAGTATTTAAGGAC
ATGCGTGTGAGTACAAAAGGATTTTCAAAAATGAAGAACCTGAGACTACTCCAGATTGAT
CATCTTCCTCTTGAAGGGAGCTTCAAGGACATGTTTACAGAGCTTAGAGTGTTAAAATGG
CATCATTGCCATTTGGAACACTTCCCATCGGATTTGCATCCGGACAAACTTGTTATTTTG
GATGTGAAATACAGTAGCCTCAAAGAACCCCCTAGTACAAAGCACTTAAGGTGTTTGAAG
ATAATGGATCTGAGCTATTGTGAGAGCCTAATGAGAACTTCAGACTTCACTGGTTCACCA
ATGCTTGAGAAACTAGTTTTTAGAGGTTGTTCGAGTTTGACTGAGGTGCATTCATCAATT
GGATATTTGGAGGTTCTCGTGTATTTAGATTTCACTGGGTGTAAGAAACTCGAGGGACTA
CCTGATAGCATCTGCAAGCTGAAATCGCTCGAGAAGCTATATCTGAGTGATTGTACAAAT
CTACAACAATTGCCTGCTGACATGGGGAATCTTAGGCGTTTGACGGCACTTTATGTAATG
GGAACATCTATTAAACAACTTCCAGTGTCTTTTGGACTTCTGAAGAATCTTCAACTCTTG
GAAGTGGGAAATGACTGGAAACTTTCAGAACCTAAATCTCTTCTTTCCATCATTTCATCC
TTTTTAACATCAAAAGATCATGATATTCTTCCATCTTCTATTATAAATTTACCGTCCTTG
GAAGTTCTAAAAGTTCCTTTCTTCAATCTGTGCCAAAGAGATATTCCCAATTGTCTTGGC
CGATTATTCTCACTGCAAGTCTTAGATTTAAGTGGAAATAATTTTCACAGCCTACCCTTC
ACTCTTAGTCACCTATCCAACCTAAAAACCCTTAGACTCTATGGATGCCCAAATCTCCTT
ATGCTCCCAGATCTTCCTTGTAACCTAGAAGAACTATGCACAAGGAATTGCAGGTCACTA
GAAATGCTTCCAGATTTGTCAAGTGCAAACAGATTGCAACTGTTGGATTTCTGTGATTGC
AGTAAATTGATTGAGATTCGGGGCCTTGAGAACCTTAAATACTTGAAGTATATGAATGCA
ATAGGTTGTATGCTCACAAAAAATCCTCTATCTGAAGGCTTCTTCAAGGCAAATTCTGCA
CCCAATGGCGTAAATGTTTTTCTTCACTGCAATGAGATTCCTAGTTGGTTCGGCTATCGG
GTTGTGGGATCTTCAATATCTTTGATTGTGCCACGATACATGGAACAAGAATTTCTTGGC
ATGATTGTTTGGGCTATTTGTGAATCTCAAGGAGAACATTGTGATGGAACCCCCATTGCC
ATCATCACCGACCTGACAAATGGGATTGAATATCCTCTTTTTGGTGTAGATATTGCAATA
CGGTATGAGAGTTATGCATGGGTGAGCTATATGCCAAGACGACATTTCAAACGCCCAATA
AAAGGCGGTGAGAAAATGATGGTTTCTATCAAAGAGCGTCATTCATCAAAAGAAGGTTTA
AGAAAGAAGTTTGGGGTTCATCTTTTGTTTGCAACCAGCCCAAAAGGAAAGTTATTTCTT
TTGAGCAGATTGTGA