Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071384
CDS Infomation

pacid=37440978 polypeptide=PGSC0003DMP400048289 locus=PGSC0003DMG400027773 ID=PGSC0003DMT400071384.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAACGTTATCTTCTCGTCTCCCATATCTTCCTTCCAAACCGGTATTCCCACCT
TCTAACTCCGGTTCAACTCTCCTCCACTTCACATCCAAAACCTGGTTTGATCAGTCCCGG
TTTAGATGCTCGGCGGGTCAAACGGGGTTCTTCACGAAGCTTGGTCGTTTGCTGAAAGAG
AAAGCCAAAAGTGATGTGGAGAAACTGTTCTCAGGATTCTCAAAAACTCGAGACAATTTA
GCTGTTATTGATGAACTCCTCCTTTACTGGAACCTTTCTGATACTGATCGTGTTCTTGAT
GAACTTGAAGAGGTTCTGTTGGTCGCTGATTTTGGGCCGAAGATTACCATAAAGATTGTG
GAGAGCTTGCGGGAGGATATATATGCAGGGAAAATCAAATCAGGAAGTGAGATAAAAAGT
GTTCTAAAGAAGAGTATCTTGGATCTATTGACTAGTAAAGCACCTAAAACAGAACTCAGT
CTGGGCTTCAGGAAACCAGCAGTAATCATGATTGTGGGTGTCAATGGAGGTGGGAAGACA
ACATCTCTAGGAAAGTTGGCAAATAGGTTGAAGAGAGAAGGGGCAAAGATACTATTAGCA
GCTGGTGATACATTTAGAGCAGCTGCTAGCGATCAGTTAGAAATTTGGGCTGAAAGGACT
GGTTGTGAGATTGTTGTTGCTGAAAAAGAGAAAGCTAAGGCATCGTCAGTTATTTCACAG
GCTGTTAAAAGAGGAAAGGAAGAGGGTTTCGATATTGTTTTATGCGACACATCTGGCCGT
TTGCACACCAACTATAGCTTGATGGAGGAATTGGTGGCATGCAAAAAAGTTGTCAGTAAA
ATTGTTAACGGTGCACCTAATGAAATCTTGCTTGTACTGGACGGAACTACTGGTTTAAAT
ATGCTTCCTCAAGCAAGAGAGTTTAACGAGGTTGTTGGAATCACTGGCTTAATATTGACT
AAACTTGATGGTTCTGCTCGAGGTGGCTGTGTGGTCAGTGTGGTTGATGAGCTTGGTATT
CCTGTAAAGTTTGTAGGTGTTGGGGAAGGTGTAGATGACCTCCAACCGTTCAATGCTGAG
GAATTTGTTAATGCTATCTTCCCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400048289
PEP Infomation

pacid=37440978 transcript=PGSC0003DMT400071384 locus=PGSC0003DMG400027773 ID=PGSC0003DMT400071384.v4.03 annot-version=v4.03
Sequence

MASTLSSRLPYLPSKPVFPPSNSGSTLLHFTSKTWFDQSRFRCSAGQTGFFTKLGRLLKE
KAKSDVEKLFSGFSKTRDNLAVIDELLLYWNLSDTDRVLDELEEVLLVADFGPKITIKIV
ESLREDIYAGKIKSGSEIKSVLKKSILDLLTSKAPKTELSLGFRKPAVIMIVGVNGGGKT
TSLGKLANRLKREGAKILLAAGDTFRAAASDQLEIWAERTGCEIVVAEKEKAKASSVISQ
AVKRGKEEGFDIVLCDTSGRLHTNYSLMEELVACKKVVSKIVNGAPNEILLVLDGTTGLN
MLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVDDLQPFNAE
EFVNAIFP*

Transcript Sequence

Transcript ID

PGSC0003DMT400071384
Transcript Infomation

pacid=37440978 locus=PGSC0003DMG400027773 ID=PGSC0003DMT400071384.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAACGTTATCTTCTCGTCTCCCATATCTTCCTTCCAAACCGGTATTCCCACCT
TCTAACTCCGGTTCAACTCTCCTCCACTTCACATCCAAAACCTGGTTTGATCAGTCCCGG
TTTAGATGCTCGGCGGGTCAAACGGGGTTCTTCACGAAGCTTGGTCGTTTGCTGAAAGAG
AAAGCCAAAAGTGATGTGGAGAAACTGTTCTCAGGATTCTCAAAAACTCGAGACAATTTA
GCTGTTATTGATGAACTCCTCCTTTACTGGAACCTTTCTGATACTGATCGTGTTCTTGAT
GAACTTGAAGAGGTTCTGTTGGTCGCTGATTTTGGGCCGAAGATTACCATAAAGATTGTG
GAGAGCTTGCGGGAGGATATATATGCAGGGAAAATCAAATCAGGAAGTGAGATAAAAAGT
GTTCTAAAGAAGAGTATCTTGGATCTATTGACTAGTAAAGCACCTAAAACAGAACTCAGT
CTGGGCTTCAGGAAACCAGCAGTAATCATGATTGTGGGTGTCAATGGAGGTGGGAAGACA
ACATCTCTAGGAAAGTTGGCAAATAGGTTGAAGAGAGAAGGGGCAAAGATACTATTAGCA
GCTGGTGATACATTTAGAGCAGCTGCTAGCGATCAGTTAGAAATTTGGGCTGAAAGGACT
GGTTGTGAGATTGTTGTTGCTGAAAAAGAGAAAGCTAAGGCATCGTCAGTTATTTCACAG
GCTGTTAAAAGAGGAAAGGAAGAGGGTTTCGATATTGTTTTATGCGACACATCTGGCCGT
TTGCACACCAACTATAGCTTGATGGAGGAATTGGTGGCATGCAAAAAAGTTGTCAGTAAA
ATTGTTAACGGTGCACCTAATGAAATCTTGCTTGTACTGGACGGAACTACTGGTTTAAAT
ATGCTTCCTCAAGCAAGAGAGTTTAACGAGGTTGTTGGAATCACTGGCTTAATATTGACT
AAACTTGATGGTTCTGCTCGAGGTGGCTGTGTGGTCAGTGTGGTTGATGAGCTTGGTATT
CCTGTAAAGTTTGTAGGTGTTGGGGAAGGTGTAGATGACCTCCAACCGTTCAATGCTGAG
GAATTTGTTAATGCTATCTTCCCATGA