Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071377
CDS Infomation

pacid=37439131 polypeptide=PGSC0003DMP400048282 locus=PGSC0003DMG400027770 ID=PGSC0003DMT400071377.v4.03 annot-version=v4.03
Sequence

ATGAATTTTGGGGGCTTTCTTGATAATAATTCTGGTGGTGGCGGTGCAAGAATTGTTGCT
GATATACCATTTAATCACAACAGCAGCAGCAACAACGACAATAAAAACAACAATATGCCC
ACTGGTGCAATTTCTCAGCCAAGACTTCTTCCTCAATCTCTTGCCAAGAACATGTTCAAC
TCTCCAGGACTTTCTCTTGCTCTTCAAACAGGTATGGAAGGGCAAAATGAGGTAACAAGA
ATGGCTGAAAACTATGAGGGAAATAACAGTGTTGGTAGAAGGAGTAGAGAGGAAGAACCA
GACAGCAGATCTGGAAGTGATAACTTGGAAGGTGCATCGGGTGATGAACAAGATGCTGCC
GACAAACCACCAAGGAAGAAAAGATACCACCGACACACTCCTCAGCAAATCCAAGAACTT
GAATCTCTTTTCAAGGAGTGTCCTCATCCTGATGAGAAACAAAGGTTGGAGTTAAGCAAA
AGGCTTTCTTTGGAGACTAGACAAGTCAAGTTTTGGTTCCAAAATCGTAGAACTCAGATG
AAGACTCAACTGGAACGCCATGAGAATTCGATACTAAGGCAAGAGAACGATAAGCTTCGT
GCAGAAAACATGTCTATAAGAGAGGCAATGAGAAATCCAATTTGTACTAATTGTGGTGGT
CCAGCAATGATTGGTGAAATCTCTCTTGAGGAGCAACATCTTAGGATTGAAAATGCTAGG
CTGAAAGATGAATTAGATCGAGTTTGTGCACTTGCTGGCAAGTTTTTGGGACGACCCATT
TCATCTTTAGTTACCTCTATGCCTCCCCCAATGCCTAATTCAAGTTTGGAACTTGGAGTT
GGAAATAATGGATATGGTGGTATGAGTAATGTACCAACAACACTCCCCTTAGCACCTCCT
GATTTTGGTGTTGGGATTTCAAATTCTTTACCAGTTGTGCCTTCAAATAGACAGTCAACT
GGAATTGAGAGATCACTTGAAAGATCCATGTATCTTGAACTAGCTTTGGCTGCCATGGAG
GAATTGGTAAAATTGGCACAAACTGATGAACCTCTTTGGTTCAGGAGCATTGAAGGTGGT
AGAGAATTACTAAACCATGAAGAGTACATAAGGACATTTACTCCTTGTATTGGTATGAGA
CCAAACAGTTTTGTTTCAGAGGCTTCCAGGGAGACAGGCATGGTTATAATCAATAGTTTA
GCTCTTGTTGAGACATTAATGGACTCTAACAAATGGGCAGAAATGTTTCCTTGTTTGATT
GCTAGAACCTCAACAACAGATGTTATATCAAGTGGTATGGGTGGAACCAGAAATGGTGCA
CTTCAGCTGATGCATGCTGAACTCCAAGTGCTTTCACCATTAGTACCAATTAGAGAGGTC
AATTTCCTGCGTTTCTGCAAACAACATGCTGAAGGTGTTTGGGCTGTCGTTGATGTGTCG
ATTGATACCATCCGTGAAACTTCTGGTGCACCAACATATCCAAATTGCAGAAGGCTTCCT
TCTGGCTGTGTTGTCCAAGATATGCCCAATGGCTACAGCAAAGTTACATGGGTAGAACAT
GCCGAATATGAAGAGGGTGCGAATCACCATCTTTACCGGCAGTTAATTAGCGCGGGTATG
GGCTTTGGTGCACAAAGATGGGTTGCCACCCTCCAACGCCAGTGTGAGTGTCTTGCAATT
CTCATGTCATCCACCGTTTCCGCCAGGGATCACACAGCAATAACTCCAAGTGGGAGGCGT
AGCATGTTGAAGCTAGCACAACGCATGACAAACAACTTTTGTGCTGGTGTTTGTGCTTCA
ACGGTACACAAGTGGAACAAACTTTGTGCAGGTAATGTTGATGAAGATGTACGTGTTATG
ACTCGAAAGAGTGTCGATGACCCCGGTGAACCAGCAGGCATAGTCTTAAGCGCTGCTACT
TCCGTTTGGTTGCCCGTTTCTCCACAAAGACTCTTTGATTTCCTCCGCGACGAACGCCTC
CGTAGCGAATGGGATATCCTATCCAACGGTGGTCCTATGCAAGAAATGGCTCATATTGCC
AAAGGCCAAGATCATGGCAACTGCGTCTCACTCCTTCGTGCTAGTGCTATGAACGCGAAT
CAGAGCAGCATGTTGATACTTCAGGAGACTTGCATAGACGCGGCTGGGGCGCTCGTTGTA
TACGCGCCAGTTGATATACCGGCAATGCACGTGGTGATGAACGGTGGAGATTCGGCCTAC
GTGGCTTTGCTTCCTTCGGGATTCTCGATTGTACCCGACGGCCCAGGATCTCGTGGGTCC
AATGGACCTTCATGTAATGGGGGCCCAGATCAAAGAATTAGCGGGTCGCTCTTGACGGTA
GCCTTTCAGATATTGGTGAATAGTCTCCCTACAGCCAAGCTTACTGTGGAATCTGTGGAA
ACAGTCAATAATCTTATATCATGCACTGTTCAGAAGATTAAAGCTGCTCTTCAATGTGAA
AGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048282
PEP Infomation

pacid=37439131 transcript=PGSC0003DMT400071377 locus=PGSC0003DMG400027770 ID=PGSC0003DMT400071377.v4.03 annot-version=v4.03
Sequence

MNFGGFLDNNSGGGGARIVADIPFNHNSSSNNDNKNNNMPTGAISQPRLLPQSLAKNMFN
SPGLSLALQTGMEGQNEVTRMAENYEGNNSVGRRSREEEPDSRSGSDNLEGASGDEQDAA
DKPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLSLETRQVKFWFQNRRTQM
KTQLERHENSILRQENDKLRAENMSIREAMRNPICTNCGGPAMIGEISLEEQHLRIENAR
LKDELDRVCALAGKFLGRPISSLVTSMPPPMPNSSLELGVGNNGYGGMSNVPTTLPLAPP
DFGVGISNSLPVVPSNRQSTGIERSLERSMYLELALAAMEELVKLAQTDEPLWFRSIEGG
RELLNHEEYIRTFTPCIGMRPNSFVSEASRETGMVIINSLALVETLMDSNKWAEMFPCLI
ARTSTTDVISSGMGGTRNGALQLMHAELQVLSPLVPIREVNFLRFCKQHAEGVWAVVDVS
IDTIRETSGAPTYPNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEEGANHHLYRQLISAGM
GFGAQRWVATLQRQCECLAILMSSTVSARDHTAITPSGRRSMLKLAQRMTNNFCAGVCAS
TVHKWNKLCAGNVDEDVRVMTRKSVDDPGEPAGIVLSAATSVWLPVSPQRLFDFLRDERL
RSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNANQSSMLILQETCIDAAGALVV
YAPVDIPAMHVVMNGGDSAYVALLPSGFSIVPDGPGSRGSNGPSCNGGPDQRISGSLLTV
AFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES*

Transcript Sequence

Transcript ID

PGSC0003DMT400071377
Transcript Infomation

pacid=37439131 locus=PGSC0003DMG400027770 ID=PGSC0003DMT400071377.v4.03 annot-version=v4.03
Sequence

ATGAATTTTGGGGGCTTTCTTGATAATAATTCTGGTGGTGGCGGTGCAAGAATTGTTGCT
GATATACCATTTAATCACAACAGCAGCAGCAACAACGACAATAAAAACAACAATATGCCC
ACTGGTGCAATTTCTCAGCCAAGACTTCTTCCTCAATCTCTTGCCAAGAACATGTTCAAC
TCTCCAGGACTTTCTCTTGCTCTTCAAACAGGTATGGAAGGGCAAAATGAGGTAACAAGA
ATGGCTGAAAACTATGAGGGAAATAACAGTGTTGGTAGAAGGAGTAGAGAGGAAGAACCA
GACAGCAGATCTGGAAGTGATAACTTGGAAGGTGCATCGGGTGATGAACAAGATGCTGCC
GACAAACCACCAAGGAAGAAAAGATACCACCGACACACTCCTCAGCAAATCCAAGAACTT
GAATCTCTTTTCAAGGAGTGTCCTCATCCTGATGAGAAACAAAGGTTGGAGTTAAGCAAA
AGGCTTTCTTTGGAGACTAGACAAGTCAAGTTTTGGTTCCAAAATCGTAGAACTCAGATG
AAGACTCAACTGGAACGCCATGAGAATTCGATACTAAGGCAAGAGAACGATAAGCTTCGT
GCAGAAAACATGTCTATAAGAGAGGCAATGAGAAATCCAATTTGTACTAATTGTGGTGGT
CCAGCAATGATTGGTGAAATCTCTCTTGAGGAGCAACATCTTAGGATTGAAAATGCTAGG
CTGAAAGATGAATTAGATCGAGTTTGTGCACTTGCTGGCAAGTTTTTGGGACGACCCATT
TCATCTTTAGTTACCTCTATGCCTCCCCCAATGCCTAATTCAAGTTTGGAACTTGGAGTT
GGAAATAATGGATATGGTGGTATGAGTAATGTACCAACAACACTCCCCTTAGCACCTCCT
GATTTTGGTGTTGGGATTTCAAATTCTTTACCAGTTGTGCCTTCAAATAGACAGTCAACT
GGAATTGAGAGATCACTTGAAAGATCCATGTATCTTGAACTAGCTTTGGCTGCCATGGAG
GAATTGGTAAAATTGGCACAAACTGATGAACCTCTTTGGTTCAGGAGCATTGAAGGTGGT
AGAGAATTACTAAACCATGAAGAGTACATAAGGACATTTACTCCTTGTATTGGTATGAGA
CCAAACAGTTTTGTTTCAGAGGCTTCCAGGGAGACAGGCATGGTTATAATCAATAGTTTA
GCTCTTGTTGAGACATTAATGGACTCTAACAAATGGGCAGAAATGTTTCCTTGTTTGATT
GCTAGAACCTCAACAACAGATGTTATATCAAGTGGTATGGGTGGAACCAGAAATGGTGCA
CTTCAGCTGATGCATGCTGAACTCCAAGTGCTTTCACCATTAGTACCAATTAGAGAGGTC
AATTTCCTGCGTTTCTGCAAACAACATGCTGAAGGTGTTTGGGCTGTCGTTGATGTGTCG
ATTGATACCATCCGTGAAACTTCTGGTGCACCAACATATCCAAATTGCAGAAGGCTTCCT
TCTGGCTGTGTTGTCCAAGATATGCCCAATGGCTACAGCAAAGTTACATGGGTAGAACAT
GCCGAATATGAAGAGGGTGCGAATCACCATCTTTACCGGCAGTTAATTAGCGCGGGTATG
GGCTTTGGTGCACAAAGATGGGTTGCCACCCTCCAACGCCAGTGTGAGTGTCTTGCAATT
CTCATGTCATCCACCGTTTCCGCCAGGGATCACACAGCAATAACTCCAAGTGGGAGGCGT
AGCATGTTGAAGCTAGCACAACGCATGACAAACAACTTTTGTGCTGGTGTTTGTGCTTCA
ACGGTACACAAGTGGAACAAACTTTGTGCAGGTAATGTTGATGAAGATGTACGTGTTATG
ACTCGAAAGAGTGTCGATGACCCCGGTGAACCAGCAGGCATAGTCTTAAGCGCTGCTACT
TCCGTTTGGTTGCCCGTTTCTCCACAAAGACTCTTTGATTTCCTCCGCGACGAACGCCTC
CGTAGCGAATGGGATATCCTATCCAACGGTGGTCCTATGCAAGAAATGGCTCATATTGCC
AAAGGCCAAGATCATGGCAACTGCGTCTCACTCCTTCGTGCTAGTGCTATGAACGCGAAT
CAGAGCAGCATGTTGATACTTCAGGAGACTTGCATAGACGCGGCTGGGGCGCTCGTTGTA
TACGCGCCAGTTGATATACCGGCAATGCACGTGGTGATGAACGGTGGAGATTCGGCCTAC
GTGGCTTTGCTTCCTTCGGGATTCTCGATTGTACCCGACGGCCCAGGATCTCGTGGGTCC
AATGGACCTTCATGTAATGGGGGCCCAGATCAAAGAATTAGCGGGTCGCTCTTGACGGTA
GCCTTTCAGATATTGGTGAATAGTCTCCCTACAGCCAAGCTTACTGTGGAATCTGTGGAA
ACAGTCAATAATCTTATATCATGCACTGTTCAGAAGATTAAAGCTGCTCTTCAATGTGAA
AGCTAA