Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071374
CDS Infomation

pacid=37435846 polypeptide=PGSC0003DMP400048279 locus=PGSC0003DMG400027768 ID=PGSC0003DMT400071374.v4.03 annot-version=v4.03
Sequence

ATGGAACCCGACGAGGATTTAGGGCTAATAGCCGACGAGATCTACGCCAACGGCGATGAA
AACACGCAGCGTCACCGGCCGATTATCAGCAGCGAGCAGCTGGATGTTGAGGCGTACGCT
GCCTTATACAGTGGCCGGACAAAAATCATGAGGCTTCACTTTATAGCCGATCGATGTGGC
AATGCTTCAATGCAGTTGGAGGCTTTGAGAATGGCCTATGATGAGATTAAGAAAGGGGAA
AACACACAATTGTTCCGTGAGGTTGTGCAGAAAATCGATGGACGTTTGGGCACTAATTAT
GGGCCAGACCCTGCTTGGGCTGACTCTGTGGATCGCCGGGCTGATTTGAGGAAGGAGAAG
CTTGAGAGTGAACTCAACGCTTATAGGACAAATCTGATCAAAGAGAGCATTAGGATGGGA
TACAATGATTTTGGAGATTTCTACTATGCACATGGACAGCTTGGAGAGGCATTTAAGAAT
TATGTTCGTACACGTGATTATTGTACGACTGCGAAACACATAATCCATATGTGTTTGAAT
GCGATTCTGGTCAGCATTGAGATGGGCCAGTTCACACATGTTACAAGCTATGTTAGTAAG
GCGGAGCAGAGTCAAGATGCTCTAGATGCTATTACAGTTGCAAAACTTCGTTGTGCTGCG
GGGTTGGCTCATTTGGAGGCAAAGAAATATAAGCTTGCTGCTCGGAAGTTCCTGGAAGTT
GGTCCAGAATTAGGTAACAACTACACTGAGGTTATTGCACCCCAAGATGTTGCTACTTAT
GGTGGACTCTGTGCACTTGCAAGTTTTGACCGAGCAGAACTGAAGAGCAAAGTTATTGAC
AATATAAACTTCAGAAATTTCTTAGAGCTGGTACCCGAGATAAGGGAGCTCATTCATGAT
TTCTATACAAGTCACTATGCTTCTTGTCTGGAGTATCTAGGGAACCTTAAAGCAAATCTA
TTGCTTGACATCCATTTGCATGACCATGTTGAGACACTGTATGATCAAATCCGTAGCAAA
GCTTTGATACAGTATACCCACCCATTTGTCTCGGTTGATTTGAATATGATGGCTAATGCT
TTCAAGACGAGTGTTGCCGGGTTGGAAAAGGAACTTGAAGCTTTGATCACTGACAACCAA
ATTCAGGCTCGAATTGACTCACACAACAAAATTTTGTATGCACGACATGCTGATCAGAGA
AATGCAACATTCCAGAAGGTGCTGCAGACAGGCAAGGAATTCGATCGGGATGTGAGATCA
ATGCTTTTGAGAGCAAACCTTCTTAAGCATGACTACATCGCTAGAACATCAAGGAAACAT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400048279
PEP Infomation

pacid=37435846 transcript=PGSC0003DMT400071374 locus=PGSC0003DMG400027768 ID=PGSC0003DMT400071374.v4.03 annot-version=v4.03
Sequence

MEPDEDLGLIADEIYANGDENTQRHRPIISSEQLDVEAYAALYSGRTKIMRLHFIADRCG
NASMQLEALRMAYDEIKKGENTQLFREVVQKIDGRLGTNYGPDPAWADSVDRRADLRKEK
LESELNAYRTNLIKESIRMGYNDFGDFYYAHGQLGEAFKNYVRTRDYCTTAKHIIHMCLN
AILVSIEMGQFTHVTSYVSKAEQSQDALDAITVAKLRCAAGLAHLEAKKYKLAARKFLEV
GPELGNNYTEVIAPQDVATYGGLCALASFDRAELKSKVIDNINFRNFLELVPEIRELIHD
FYTSHYASCLEYLGNLKANLLLDIHLHDHVETLYDQIRSKALIQYTHPFVSVDLNMMANA
FKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQTGKEFDRDVRS
MLLRANLLKHDYIARTSRKH*

Transcript Sequence

Transcript ID

PGSC0003DMT400071374
Transcript Infomation

pacid=37435846 locus=PGSC0003DMG400027768 ID=PGSC0003DMT400071374.v4.03 annot-version=v4.03
Sequence

ATGGAACCCGACGAGGATTTAGGGCTAATAGCCGACGAGATCTACGCCAACGGCGATGAA
AACACGCAGCGTCACCGGCCGATTATCAGCAGCGAGCAGCTGGATGTTGAGGCGTACGCT
GCCTTATACAGTGGCCGGACAAAAATCATGAGGCTTCACTTTATAGCCGATCGATGTGGC
AATGCTTCAATGCAGTTGGAGGCTTTGAGAATGGCCTATGATGAGATTAAGAAAGGGGAA
AACACACAATTGTTCCGTGAGGTTGTGCAGAAAATCGATGGACGTTTGGGCACTAATTAT
GGGCCAGACCCTGCTTGGGCTGACTCTGTGGATCGCCGGGCTGATTTGAGGAAGGAGAAG
CTTGAGAGTGAACTCAACGCTTATAGGACAAATCTGATCAAAGAGAGCATTAGGATGGGA
TACAATGATTTTGGAGATTTCTACTATGCACATGGACAGCTTGGAGAGGCATTTAAGAAT
TATGTTCGTACACGTGATTATTGTACGACTGCGAAACACATAATCCATATGTGTTTGAAT
GCGATTCTGGTCAGCATTGAGATGGGCCAGTTCACACATGTTACAAGCTATGTTAGTAAG
GCGGAGCAGAGTCAAGATGCTCTAGATGCTATTACAGTTGCAAAACTTCGTTGTGCTGCG
GGGTTGGCTCATTTGGAGGCAAAGAAATATAAGCTTGCTGCTCGGAAGTTCCTGGAAGTT
GGTCCAGAATTAGGTAACAACTACACTGAGGTTATTGCACCCCAAGATGTTGCTACTTAT
GGTGGACTCTGTGCACTTGCAAGTTTTGACCGAGCAGAACTGAAGAGCAAAGTTATTGAC
AATATAAACTTCAGAAATTTCTTAGAGCTGGTACCCGAGATAAGGGAGCTCATTCATGAT
TTCTATACAAGTCACTATGCTTCTTGTCTGGAGTATCTAGGGAACCTTAAAGCAAATCTA
TTGCTTGACATCCATTTGCATGACCATGTTGAGACACTGTATGATCAAATCCGTAGCAAA
GCTTTGATACAGTATACCCACCCATTTGTCTCGGTTGATTTGAATATGATGGCTAATGCT
TTCAAGACGAGTGTTGCCGGGTTGGAAAAGGAACTTGAAGCTTTGATCACTGACAACCAA
ATTCAGGCTCGAATTGACTCACACAACAAAATTTTGTATGCACGACATGCTGATCAGAGA
AATGCAACATTCCAGAAGGTGCTGCAGACAGGCAAGGAATTCGATCGGGATGTGAGATCA
ATGCTTTTGAGAGCAAACCTTCTTAAGCATGACTACATCGCTAGAACATCAAGGAAACAT
TGA