Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071371
CDS Infomation

pacid=37441140 polypeptide=PGSC0003DMP400048276 locus=PGSC0003DMG400027766 ID=PGSC0003DMT400071371.v4.03 annot-version=v4.03
Sequence

ATGGCGATATTAGCCAAATTGTCACACTCCCTTACATCGATTATCAAGAAAACTAATCTT
TACTACGTGGCTGCAACAATTGTTCTCTGTTGCACTTTCTATGTAATCGGACTTTGGCCG
CAAGGTGGTGATGTAACCAGCCGTCAATTATCCTCAACCGCCTCCATTTTACCCACCCTC
CCATGCAACCCATCAATCAAAAACACAAATCCCAATTCCGGTTCATCGATTTCCATCGAC
TTCACCGCCCACCACACCGCTGATGACCTTGTACCACTCTCATCATCGGCGAGTGTAAAC
CACTACCCATCGTGTAACCCGGAATTGTCCGAATACACCCCGTGTGAAGACTCGAAGAGA
TCATTGAAATTCGATAGAAACATGCTTGCTTACAGAGAAAGGCATTGTCCAGAGAAGAAT
GAGTTGTTGAAGTGCAGAATTCCGGCGCCGTTTGGGTATAAACCGCCGTTCCGATGGCCG
CAAAGTCGTGACTCGGTTTGGTATGCGAATGTTCCGCATAAACATCTTACGGTTGAGAAA
GCCGGACAGAATTGGGTCCGGTTTAAGGGTGACCGGTTTACCTTCCCCGGCGGCGGCACC
ATGTTTCCACGTGGCGCTGATGCTTATATTGATGATATCGGAAAATTGATCAAGCTTAAA
GATGGTTCCATTAGAACCGCCATTGATACCGGTTGCGGGGTTGCTAGTTGGGGTGCTTAC
TTGCTTTCCAGAGACATCCTTCCAATTTCCTTTGCACCTAAAGATACACATGAAGCTCAA
GTTCAATTTGCCCTCGAGCGAGGAGTTCCAGCATTGATTGGCATATTAGCTACTAATCGG
CTACCTTATCCTGCAAGGGCATTCGATATGGCACATTGTTCTCGCTGTCTCATCCCTTGG
GGAAAATATGATGGTCTATATTTAATTGAGGTTGATCGAATTTTACGTCCTGGTGGATAC
TGGATTCTCTCTGGACCACCCGTTAACTGGCAAGGTCACTGGAGGGGCTGGAACAGAACA
GCTGACGATTTGAAAGCAGAGCAAGATCAAATTGAGAATGTTGCAAGAAGCCTATGCTGG
AAAAAAGTAACTCAGAGAGGTGACCTAGCAATTTGGCAGAAGCCTACTAATCATGTGCAT
TGCAAAATTAACCGAAAGGTCTTCAGGAACCCACCCTTTTGCCAGGAACAAGATCCCGAC
AAAGCATGGTACACCAAGATAGATGCTTGTTTGAGTCCACTTCCTGAAGTGTCCAGCGTT
AAAGATGTCGCTGGAGGGCCGCTGGCGAATTGGCCAGAAAGATTAACCGCGGTCCCTCCT
AGGATTGCTAGTTCTAGTATAGAGGGAGTTACTGCAGAGGGGTTCTCTGAAGATACAGAA
TTGTGGAAGAAGAGAGTCGCCCACTACAAGGTATTGGACAGTCAATTAGCAGAACATGGA
AGGTACCGTAACATACTTGACATGAATGCTTGGCTGGGAGGATTTGCAGCTGCACTTGTT
GATGATCCAGTTTGGGTCATGAACATCGTCCCCACTGAGGCTGAAGTCAATACTCTTGGA
GTTATCTTCGAACGTGGCTTAATTGGAACATACCAAAGCTGGTGTGAGGCAATGTCAACG
TATCCAAGAACTTACGACTTCATACATGCTGATTCTGTCTTCACCCTATACCAGGACAGG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400048276
PEP Infomation

pacid=37441140 transcript=PGSC0003DMT400071371 locus=PGSC0003DMG400027766 ID=PGSC0003DMT400071371.v4.03 annot-version=v4.03
Sequence

MAILAKLSHSLTSIIKKTNLYYVAATIVLCCTFYVIGLWPQGGDVTSRQLSSTASILPTL
PCNPSIKNTNPNSGSSISIDFTAHHTADDLVPLSSSASVNHYPSCNPELSEYTPCEDSKR
SLKFDRNMLAYRERHCPEKNELLKCRIPAPFGYKPPFRWPQSRDSVWYANVPHKHLTVEK
AGQNWVRFKGDRFTFPGGGTMFPRGADAYIDDIGKLIKLKDGSIRTAIDTGCGVASWGAY
LLSRDILPISFAPKDTHEAQVQFALERGVPALIGILATNRLPYPARAFDMAHCSRCLIPW
GKYDGLYLIEVDRILRPGGYWILSGPPVNWQGHWRGWNRTADDLKAEQDQIENVARSLCW
KKVTQRGDLAIWQKPTNHVHCKINRKVFRNPPFCQEQDPDKAWYTKIDACLSPLPEVSSV
KDVAGGPLANWPERLTAVPPRIASSSIEGVTAEGFSEDTELWKKRVAHYKVLDSQLAEHG
RYRNILDMNAWLGGFAAALVDDPVWVMNIVPTEAEVNTLGVIFERGLIGTYQSWCEAMST
YPRTYDFIHADSVFTLYQDR*

Transcript Sequence

Transcript ID

PGSC0003DMT400071371
Transcript Infomation

pacid=37441140 locus=PGSC0003DMG400027766 ID=PGSC0003DMT400071371.v4.03 annot-version=v4.03
Sequence

ATGGCGATATTAGCCAAATTGTCACACTCCCTTACATCGATTATCAAGAAAACTAATCTT
TACTACGTGGCTGCAACAATTGTTCTCTGTTGCACTTTCTATGTAATCGGACTTTGGCCG
CAAGGTGGTGATGTAACCAGCCGTCAATTATCCTCAACCGCCTCCATTTTACCCACCCTC
CCATGCAACCCATCAATCAAAAACACAAATCCCAATTCCGGTTCATCGATTTCCATCGAC
TTCACCGCCCACCACACCGCTGATGACCTTGTACCACTCTCATCATCGGCGAGTGTAAAC
CACTACCCATCGTGTAACCCGGAATTGTCCGAATACACCCCGTGTGAAGACTCGAAGAGA
TCATTGAAATTCGATAGAAACATGCTTGCTTACAGAGAAAGGCATTGTCCAGAGAAGAAT
GAGTTGTTGAAGTGCAGAATTCCGGCGCCGTTTGGGTATAAACCGCCGTTCCGATGGCCG
CAAAGTCGTGACTCGGTTTGGTATGCGAATGTTCCGCATAAACATCTTACGGTTGAGAAA
GCCGGACAGAATTGGGTCCGGTTTAAGGGTGACCGGTTTACCTTCCCCGGCGGCGGCACC
ATGTTTCCACGTGGCGCTGATGCTTATATTGATGATATCGGAAAATTGATCAAGCTTAAA
GATGGTTCCATTAGAACCGCCATTGATACCGGTTGCGGGGTTGCTAGTTGGGGTGCTTAC
TTGCTTTCCAGAGACATCCTTCCAATTTCCTTTGCACCTAAAGATACACATGAAGCTCAA
GTTCAATTTGCCCTCGAGCGAGGAGTTCCAGCATTGATTGGCATATTAGCTACTAATCGG
CTACCTTATCCTGCAAGGGCATTCGATATGGCACATTGTTCTCGCTGTCTCATCCCTTGG
GGAAAATATGATGGTCTATATTTAATTGAGGTTGATCGAATTTTACGTCCTGGTGGATAC
TGGATTCTCTCTGGACCACCCGTTAACTGGCAAGGTCACTGGAGGGGCTGGAACAGAACA
GCTGACGATTTGAAAGCAGAGCAAGATCAAATTGAGAATGTTGCAAGAAGCCTATGCTGG
AAAAAAGTAACTCAGAGAGGTGACCTAGCAATTTGGCAGAAGCCTACTAATCATGTGCAT
TGCAAAATTAACCGAAAGGTCTTCAGGAACCCACCCTTTTGCCAGGAACAAGATCCCGAC
AAAGCATGGTACACCAAGATAGATGCTTGTTTGAGTCCACTTCCTGAAGTGTCCAGCGTT
AAAGATGTCGCTGGAGGGCCGCTGGCGAATTGGCCAGAAAGATTAACCGCGGTCCCTCCT
AGGATTGCTAGTTCTAGTATAGAGGGAGTTACTGCAGAGGGGTTCTCTGAAGATACAGAA
TTGTGGAAGAAGAGAGTCGCCCACTACAAGGTATTGGACAGTCAATTAGCAGAACATGGA
AGGTACCGTAACATACTTGACATGAATGCTTGGCTGGGAGGATTTGCAGCTGCACTTGTT
GATGATCCAGTTTGGGTCATGAACATCGTCCCCACTGAGGCTGAAGTCAATACTCTTGGA
GTTATCTTCGAACGTGGCTTAATTGGAACATACCAAAGCTGGTGTGAGGCAATGTCAACG
TATCCAAGAACTTACGACTTCATACATGCTGATTCTGTCTTCACCCTATACCAGGACAGG
TAA