Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071337
CDS Infomation

pacid=37473400 polypeptide=PGSC0003DMP400048253 locus=PGSC0003DMG400027750 ID=PGSC0003DMT400071337.v4.03 annot-version=v4.03
Sequence

ATGGCCGGAAAAGGTGAAGGACCGGCGATCGGAATTGATCTCGGAACGACGTATTCGTGT
GTAGGTGTATGGCAGCATGATCGAGTTGAGATTATTGCGAATGATCAAGGGAACAGGACT
ACGCCGTCGTATGTGGCGTTTACTGATACGGAGCGATTGATTGGAGATGCTGCTAAGAAT
CAAGTTGCTATGAACCCTACCAACACTGTTTTCGATGCGAAGCGATTAATTGGTAGGAGA
TTCAGTGACCCATCAGTACAGAGTGACATGAAGCTTTGGCCTTTCAAGGTCATCCCAGGA
CCTGCTGACAAGCCTATGATTGTTGTCAATTACAAAGGTGAAGAAAAAGAGTTCTCCGCA
GAAGAAATCTCCTCCATGGTTCTTATTAAGATGAAGGAGATTGCTGAGGCTTTTCTTGGA
ATAACAATAAAGAATGCTGTTGTTACTGTGCCTGCTTACTTCAATGACTCTCAACGTCAG
GCTACTAAGGATGCTGGAACTATTTCTGGGCTCAATGTTATGCGTATTATCAACGAGCCT
ACTGCTGCTGCAATTGCATATGGACTTGATAAGAAATCAAGCAGTACAGGGGAGAAGACT
GTGCTTATTTTTGACTTGGGTGGTGGTACATTTGATGTCTCACTACTTACCATTGAAGAA
GGTATTTTTGAAGTGAAAGCCACTGCTGGTGATACTCATCTTGGTGGAGAAGATTTTGAC
AACAGGATGGTTAATCACTTTGTTCAAGAATTCAAAAGGAAGCACAAAAAGGACATCAGT
GGGAATCCTAGAGCTCTTAGGAGATTAAGAACTGCATGTGAAAGAGCTAAGAGAACACTC
TCATCCACTGCTCAGACAACTATTGAAATTGATTCTCTTTATGAGGGAATTGATTTCTAC
ACGACGATTACTCGTGCTCGGTTTGAGGAGCTCAACATGGATCTTTTCAGGAAATGTATG
GAGCCTGTTGAGAAGTGTTTGAGGGATGCTAAAATTGACAAGAGTGGTGTTCATGATATT
GTTCTTGTTGGTGGCTCTACTCGAATTCCAAAGGTGCAACAGTTGTTGCAGGACTTCTTT
AACGGGAAGGAACTCTGTAAGAGCATCAACCCGGACGAGGCTGTTGCGTATGGAGCTGCT
GTGCAAGCTGCAATCTTGAGTGGTGAAGGGAATGAAAAAGTTCAGGACCTTTTGCTGTTG
GATGTTACACCTCTTTCCCTTGGTCTGGAGACTGCTGGAGGTGTTATGACCACCTTGATT
CCAAGGAACACCACGATTCCGACTAAGAAAGAGCAGGTGTTTTCGACCTACTCCGACAAT
CAACCTGGTGTGTTGATTCAAGTTTATGAAGGTGAAAGAGCCAGGACTAGAGATAACAAC
TTGCTGGGGAAATTTGAACTCACTGGCATTCCTCCAGCACCTAGAGGTGTCCCCCAAATT
ACTGTATGCTTTGACATTGACGCAAATGGTATTTTAAATGTCTCTGCTGAGGATAAAACC
ACTGGTCAGAAAAACAAGATTACCATCACCAATGACAAAGGAAGACTATCTAAAGATGAG
ATTGAGAAAATGGTTCAAGAAGCTGAGAGGTACAAAGCTGAAGACGAAGAGCACAAGAAG
AAAGTGGAAGCCAAGAATGCCTTGGAAAATTATGCCTACAACATGAGGAACACCATCAAG
GATGATAAGATCGCTTCGAAGCTTTCTCCTGAGGAGAAGCAGAAGATAGAAGATTCTGTT
GAGCAGGCAATTCAGTGGCTTGATGGGAATCAACTCGCGGAGGCTGATGAGTTTGAGGAC
AAGATGAAGGAGCTTGAGAGCATATGCAACCCCATTATCGCGAAGATGTACCAGGGTGGT
GCTGACATGGCTGGTGGCATGGATGAAGATGGCCCTTCTGCCGGTGCTAGCGGTGCTGGT
GCAGGCCCTAAGATTGAAGAAGTTGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048253
PEP Infomation

pacid=37473400 transcript=PGSC0003DMT400071337 locus=PGSC0003DMG400027750 ID=PGSC0003DMT400071337.v4.03 annot-version=v4.03
Sequence

MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPADKPMIVVNYKGEEKEFSA
EEISSMVLIKMKEIAEAFLGITIKNAVVTVPAYFNDSQRQATKDAGTISGLNVMRIINEP
TAAAIAYGLDKKSSSTGEKTVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKIDKSGVHDIVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELTGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAERYKAEDEEHKK
KVEAKNALENYAYNMRNTIKDDKIASKLSPEEKQKIEDSVEQAIQWLDGNQLAEADEFED
KMKELESICNPIIAKMYQGGADMAGGMDEDGPSAGASGAGAGPKIEEVD*

Transcript Sequence

Transcript ID

PGSC0003DMT400071337
Transcript Infomation

pacid=37473400 locus=PGSC0003DMG400027750 ID=PGSC0003DMT400071337.v4.03 annot-version=v4.03
Sequence

ATGGCCGGAAAAGGTGAAGGACCGGCGATCGGAATTGATCTCGGAACGACGTATTCGTGT
GTAGGTGTATGGCAGCATGATCGAGTTGAGATTATTGCGAATGATCAAGGGAACAGGACT
ACGCCGTCGTATGTGGCGTTTACTGATACGGAGCGATTGATTGGAGATGCTGCTAAGAAT
CAAGTTGCTATGAACCCTACCAACACTGTTTTCGATGCGAAGCGATTAATTGGTAGGAGA
TTCAGTGACCCATCAGTACAGAGTGACATGAAGCTTTGGCCTTTCAAGGTCATCCCAGGA
CCTGCTGACAAGCCTATGATTGTTGTCAATTACAAAGGTGAAGAAAAAGAGTTCTCCGCA
GAAGAAATCTCCTCCATGGTTCTTATTAAGATGAAGGAGATTGCTGAGGCTTTTCTTGGA
ATAACAATAAAGAATGCTGTTGTTACTGTGCCTGCTTACTTCAATGACTCTCAACGTCAG
GCTACTAAGGATGCTGGAACTATTTCTGGGCTCAATGTTATGCGTATTATCAACGAGCCT
ACTGCTGCTGCAATTGCATATGGACTTGATAAGAAATCAAGCAGTACAGGGGAGAAGACT
GTGCTTATTTTTGACTTGGGTGGTGGTACATTTGATGTCTCACTACTTACCATTGAAGAA
GGTATTTTTGAAGTGAAAGCCACTGCTGGTGATACTCATCTTGGTGGAGAAGATTTTGAC
AACAGGATGGTTAATCACTTTGTTCAAGAATTCAAAAGGAAGCACAAAAAGGACATCAGT
GGGAATCCTAGAGCTCTTAGGAGATTAAGAACTGCATGTGAAAGAGCTAAGAGAACACTC
TCATCCACTGCTCAGACAACTATTGAAATTGATTCTCTTTATGAGGGAATTGATTTCTAC
ACGACGATTACTCGTGCTCGGTTTGAGGAGCTCAACATGGATCTTTTCAGGAAATGTATG
GAGCCTGTTGAGAAGTGTTTGAGGGATGCTAAAATTGACAAGAGTGGTGTTCATGATATT
GTTCTTGTTGGTGGCTCTACTCGAATTCCAAAGGTGCAACAGTTGTTGCAGGACTTCTTT
AACGGGAAGGAACTCTGTAAGAGCATCAACCCGGACGAGGCTGTTGCGTATGGAGCTGCT
GTGCAAGCTGCAATCTTGAGTGGTGAAGGGAATGAAAAAGTTCAGGACCTTTTGCTGTTG
GATGTTACACCTCTTTCCCTTGGTCTGGAGACTGCTGGAGGTGTTATGACCACCTTGATT
CCAAGGAACACCACGATTCCGACTAAGAAAGAGCAGGTGTTTTCGACCTACTCCGACAAT
CAACCTGGTGTGTTGATTCAAGTTTATGAAGGTGAAAGAGCCAGGACTAGAGATAACAAC
TTGCTGGGGAAATTTGAACTCACTGGCATTCCTCCAGCACCTAGAGGTGTCCCCCAAATT
ACTGTATGCTTTGACATTGACGCAAATGGTATTTTAAATGTCTCTGCTGAGGATAAAACC
ACTGGTCAGAAAAACAAGATTACCATCACCAATGACAAAGGAAGACTATCTAAAGATGAG
ATTGAGAAAATGGTTCAAGAAGCTGAGAGGTACAAAGCTGAAGACGAAGAGCACAAGAAG
AAAGTGGAAGCCAAGAATGCCTTGGAAAATTATGCCTACAACATGAGGAACACCATCAAG
GATGATAAGATCGCTTCGAAGCTTTCTCCTGAGGAGAAGCAGAAGATAGAAGATTCTGTT
GAGCAGGCAATTCAGTGGCTTGATGGGAATCAACTCGCGGAGGCTGATGAGTTTGAGGAC
AAGATGAAGGAGCTTGAGAGCATATGCAACCCCATTATCGCGAAGATGTACCAGGGTGGT
GCTGACATGGCTGGTGGCATGGATGAAGATGGCCCTTCTGCCGGTGCTAGCGGTGCTGGT
GCAGGCCCTAAGATTGAAGAAGTTGATTAA