Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071329
CDS Infomation

pacid=37475750 polypeptide=PGSC0003DMP400048246 locus=PGSC0003DMG400027744 ID=PGSC0003DMT400071329.v4.03 annot-version=v4.03
Sequence

ATGGGTTCTTGTTTAAGTGTTCGAATTAAAGCAGAAAGTCCTCTTCATCATGGAGCAAGT
GATGGAAGAGAGTTGAGTAGTAGGCATTCATACTCATCGGCTCCGTTGACTCCTCGTAGT
CAGAGTGAAATTCTGGAATTGTCGAATCTGAATAGTTTTAGTTTCAATGAACTCCGAGTA
GCCACGAGGAACTTCCGTCCAGATAGTGTGTTGGGAGAAGGTGGTTTTGGTTGTGTATTT
AAGGGTTGGATAGATGAGAATACGTTTAAAGCTGCAAGGCCAGGGACTGGATTGGTTATA
GCTGTAAAGAGATTGAATCAAGAAGGCTTTCAAGGTCACAAGGAATGGCTGGCGGAAATC
ACTTACCTGAGCCAGCTATCTCATCCTAATCTCGTGAAGTTGATCGGATATTGCTTAGAA
GATGAACACAGGCTTCTGGTGTACGAATTCATGCCGAGAGGAAGTTTGGAAAATCATCTA
TTCAGAAGGAGTACTTATTTCCAACCGCTATCATGGAATCTCCGGATGAAGGTTGCTCTC
GAGGCAGCCAAGGGACTGACTTATCTCCACAGCCCAGAAGCTAAAGTTATATATCGGGAT
TTCAAATCATCTAACATTTTGCTTGATGCTAATTACAATGCAAAGCTTTCTGATTTTGGA
TTGGCGAAGGATGGGCCAATCGACGGTAAAAGCCATGTCTCTACTAGAGTAATGGGTACC
TTTGGCTATGCTGCTCCCGAGTATATGGCCACAGGTCATATAACCGCTAGAAGTGATGTA
TACAGTTTCGGGGTTGTTCTTCTAGAAATGCTGACAGGTCGTCGAGTGATGGACAAAAAC
CGCCCCCATGGAGAACATAATCTGATCGAATGGGCTAAGCCTTTCCTTACTAGTAAACGT
AAAGTCCTCCGTATTATGGATCACCGTATAGAAGGTCAGTACTCAGTGGAAGGAGCACTG
AGAGCAGCACTTCTTGCTGTCAAATGCCTGGCATTAGAACCCAAATTCAGGCCCAAAATG
CCCGAGGTCGTAAAGGCATTGGAGCAACTTCAGAACTTAAACGAATCAGGAAGTCTCAAA
CGCGAAACTACACAAAGGAAGCATCACAGAACCTCTACCGATGAAGCTTCAGGAAGAAAA
ACTACGTCTTATCCGAGGCCAGCTGCTTCTCCCCTTGTTACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400048246
PEP Infomation

pacid=37475750 transcript=PGSC0003DMT400071329 locus=PGSC0003DMG400027744 ID=PGSC0003DMT400071329.v4.03 annot-version=v4.03
Sequence

MGSCLSVRIKAESPLHHGASDGRELSSRHSYSSAPLTPRSQSEILELSNLNSFSFNELRV
ATRNFRPDSVLGEGGFGCVFKGWIDENTFKAARPGTGLVIAVKRLNQEGFQGHKEWLAEI
TYLSQLSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRSTYFQPLSWNLRMKVAL
EAAKGLTYLHSPEAKVIYRDFKSSNILLDANYNAKLSDFGLAKDGPIDGKSHVSTRVMGT
FGYAAPEYMATGHITARSDVYSFGVVLLEMLTGRRVMDKNRPHGEHNLIEWAKPFLTSKR
KVLRIMDHRIEGQYSVEGALRAALLAVKCLALEPKFRPKMPEVVKALEQLQNLNESGSLK
RETTQRKHHRTSTDEASGRKTTSYPRPAASPLVT*

Transcript Sequence

Transcript ID

PGSC0003DMT400071329
Transcript Infomation

pacid=37475750 locus=PGSC0003DMG400027744 ID=PGSC0003DMT400071329.v4.03 annot-version=v4.03
Sequence

ATGGGTTCTTGTTTAAGTGTTCGAATTAAAGCAGAAAGTCCTCTTCATCATGGAGCAAGT
GATGGAAGAGAGTTGAGTAGTAGGCATTCATACTCATCGGCTCCGTTGACTCCTCGTAGT
CAGAGTGAAATTCTGGAATTGTCGAATCTGAATAGTTTTAGTTTCAATGAACTCCGAGTA
GCCACGAGGAACTTCCGTCCAGATAGTGTGTTGGGAGAAGGTGGTTTTGGTTGTGTATTT
AAGGGTTGGATAGATGAGAATACGTTTAAAGCTGCAAGGCCAGGGACTGGATTGGTTATA
GCTGTAAAGAGATTGAATCAAGAAGGCTTTCAAGGTCACAAGGAATGGCTGGCGGAAATC
ACTTACCTGAGCCAGCTATCTCATCCTAATCTCGTGAAGTTGATCGGATATTGCTTAGAA
GATGAACACAGGCTTCTGGTGTACGAATTCATGCCGAGAGGAAGTTTGGAAAATCATCTA
TTCAGAAGGAGTACTTATTTCCAACCGCTATCATGGAATCTCCGGATGAAGGTTGCTCTC
GAGGCAGCCAAGGGACTGACTTATCTCCACAGCCCAGAAGCTAAAGTTATATATCGGGAT
TTCAAATCATCTAACATTTTGCTTGATGCTAATTACAATGCAAAGCTTTCTGATTTTGGA
TTGGCGAAGGATGGGCCAATCGACGGTAAAAGCCATGTCTCTACTAGAGTAATGGGTACC
TTTGGCTATGCTGCTCCCGAGTATATGGCCACAGGTCATATAACCGCTAGAAGTGATGTA
TACAGTTTCGGGGTTGTTCTTCTAGAAATGCTGACAGGTCGTCGAGTGATGGACAAAAAC
CGCCCCCATGGAGAACATAATCTGATCGAATGGGCTAAGCCTTTCCTTACTAGTAAACGT
AAAGTCCTCCGTATTATGGATCACCGTATAGAAGGTCAGTACTCAGTGGAAGGAGCACTG
AGAGCAGCACTTCTTGCTGTCAAATGCCTGGCATTAGAACCCAAATTCAGGCCCAAAATG
CCCGAGGTCGTAAAGGCATTGGAGCAACTTCAGAACTTAAACGAATCAGGAAGTCTCAAA
CGCGAAACTACACAAAGGAAGCATCACAGAACCTCTACCGATGAAGCTTCAGGAAGAAAA
ACTACGTCTTATCCGAGGCCAGCTGCTTCTCCCCTTGTTACATGA