Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071173
CDS Infomation

pacid=37450928 polypeptide=PGSC0003DMP400048135 locus=PGSC0003DMG402027680 ID=PGSC0003DMT400071173.v4.03 annot-version=v4.03
Sequence

ATGGATGACCTAGATATGCTGACCCGAGATTACGGGTTTAGACCCGGTGGAAAATCGGCT
CCGATGAGATCCGACGGTGGAGATCGTCGTTCCTCTTCCGTACGATCATCGTCATCTTCA
CCGTTGTATGATGATTCTGATGGTTTATTGTACAAAGACGTGTTCGGTGGACCTCCAAAA
TACACCAAGTCTAGTAATAACAACAGTAAATCTTCGTCGATGAATGATATCAATTACGAT
TCAATTTTCAATACTGGCAATGATTCGAATAGCTATATCAACAACAATAAGACATCGTCC
GTTCCGGTGTATGACAAGCCAGTGTACGACGAGGATATTTTTGATGGATTGCCAGGACTG
AAGAACAAATCGGAATCTGAAAAATCTGCATCCACTGTGAGATTTGACGACAACGTTTTT
GCTACAATGACTTCGCCACCACAACCAAAGATGAAGGACGAACATTTTGGTGATCTGCTT
GGGAATTTGAAGTCGAATGAGAAGGTAACAGAGCCTAGGAGTAGTACGAGCTCGAGTGCC
AAAGAGTTTGATGATTTGTTAGCTGGTTTTGGGAGTAGCACTTCCACCACTAATAAGAGG
TCATTCACAGAGTCTAGTCATTACTCCAAACCCACTGGAAATTCAAATCAAAGTTCTATT
GGTTTGGATGACCCTTTTGCAGGTTTAGGGTCAACCTCAATGCCGGCTTCGTCTAATCCG
GGGGAGTTCATGGATCCACTTGAACAGATTGGTCAGCTAGGTAAATCTGGAAATACACAC
TCTGAAGCTTCATCGGTTAGTGGAGGAGTTCTTGATGATTTAGATCCACTGAATGGTTTT
AGTAAGTCTGTCCCTCCATTATACTCTGCTAGGAATAACAGAGGGACGGGAGGGAGTCCT
CAGAGGGCAGGATCAGGAACGAGTGACACACAAGCCTCTTCTTCTAGAGAAAATATCGGA
AAATCTTCTGATAGCCGCTCACAGAAAAAGGTGCCTGAGGATGGTTTTCAGGACTCTCCT
CTGTTTGACATGCCTTCAGGTGATCCTCAGAGATCTTTTGGTCCAGCTGGCTCCCCCCCT
TCATATGCAAGTAGCAATATTCATGAAACACACTTTGAATCAGATACGTCCCCAAGATCA
GAGGACCAAATGCAGCCTTCTGATGATGTATGGCTTAGTGTATCAGAGATTCCTCTTTTT
ACACAACCTACAAGAGCTCCACCTCCATCACGACCTCCTCCTCCAATTCCACGGCGAAAT
TTTAAGTCAGAGGCTAGTTCCTTTGCTTCAAATGCAAGAAAGAAGGGTGACAGATATTCT
TCTTCTCCAAGTTACAACCAATACTCTCAAAGTCCTAAGGTTGTTCGTCCTGCAGCCAAG
AGCCCTCCAACTTCTCAGTTGGATGAACTTGATGAATTTGCCATGGGTAAATCTCCCCAC
AGTGTGGATGAAAGTGCAGGAGTTCTTTCTGGTGAAGATATGAATGCAAACTCAGTAGCT
GCTGCATCAGCAGCAGCGATGAAGGAGGCTATGGATAGAGCTCAAGCCAAATTTAGACAT
GCTAAGGAAGTTCGAGAAAGAGAATCTGCAAAGGCAGCTAAGAGTAAGGAGGCTGTAAAC
CTGGACAGGGATGAACAAGCCATGCATGAGACACAAGAAAAAGAATTGAGAGAAAACAAG
GAGAGATTAGAACGTGAACGTCAACAGAGGGAAAAAGAAGAGGAAGAGAGAGCACAATGG
AAACTTGAGAGGGAGAGGGAGAGAGCCAGAGAGGTAGAGAGAGATAGGGGTAGGCAAGCT
GTAGAAAGGGCTACTAGGGAAGCACGAGAAAGAGCAGCAGCAGACGCTAGAGAAAGAGCA
GCTGCTGCTGCTCGTTTAAAAACCGAAAGAGCTGCTGTGGAGAGGGCTGGTGCTGAAGCT
CGAGAACGGGCTGAAAGGGCTGCAGTTCAGCGAGCACAAGCAGAAGCCCGTGAAAGAGCT
TCTGCAGAAGCTAAAGAAAGAGCAGAAAAGGTAGCTGCAGAAGCAAGGGAAAAAGAAGCA
CGCGAAAAAGCTTCAGCTGCAAAGGCTGAGGCTGAGGTAAGACGTCGAGCAGAACGAGCT
GCAGTAGAAAGAGCTGCTGCAGAGGCTCGAGAAAGGGCAGCTGCTGCTGCAAGGATGAAC
CAACAAAAGAATGATGATGATCTTGAATCCTTTTTCAATATGGGTTCTAGAGCCAATAGT
GCACCAAAGACAAGAACAAGTTCTGTAAATGAGACTTCATTTGCTTCACAGTTCCAGAAC
AAGGCAGGTGCTGGAGGGTCAAAGCCAACATTTTCATCTACCACAACCTCCTCCAACAGG
ACAAAGGCATCTTCAACAACAAGTTTTGCTGATGATCTCTCTTCAATATTTGGAGCTGCC
ACTTCATCTGGAGATTTCCAAGAGGTTGAAGGGGAAACCGAAGAAAGAAGAAGAGCTAGA
TTGGAACGCCATCAACGAACTCAGGAGCGTGCGGCCAAAGCTTTGGCTGAAAAGAATCAA
CGTGACCTTCAAGTTCAGATGGAGCAGCAGGAAAGACACAGAATATCTGAGACCCTAGAT
ATTGAAATCAAGCGATGGGCTGCTGGGAAAGAAGGAAATCTTCGTGCATTGCTATCAACT
ATGCAATATGTGCTTTGGCCTGAATGCGGTTGGCAGCCTGTTTCTTTGACGGATTTAATT
ACTGGTGCTTCTGTAAAAAAGGTGTATAGAAAAGCAACATTGTGTATCCATCCCGATAAA
GTGCAGCAGAAAGGTGCCACCCTTCAACAGAAATATGTTGCTGAGAAGGTGTTTGACATG
CTCAAGGAAGCATGGAACAAATTCAATTCAGAGGAGCTTTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400048135
PEP Infomation

pacid=37450928 transcript=PGSC0003DMT400071173 locus=PGSC0003DMG402027680 ID=PGSC0003DMT400071173.v4.03 annot-version=v4.03
Sequence

MDDLDMLTRDYGFRPGGKSAPMRSDGGDRRSSSVRSSSSSPLYDDSDGLLYKDVFGGPPK
YTKSSNNNSKSSSMNDINYDSIFNTGNDSNSYINNNKTSSVPVYDKPVYDEDIFDGLPGL
KNKSESEKSASTVRFDDNVFATMTSPPQPKMKDEHFGDLLGNLKSNEKVTEPRSSTSSSA
KEFDDLLAGFGSSTSTTNKRSFTESSHYSKPTGNSNQSSIGLDDPFAGLGSTSMPASSNP
GEFMDPLEQIGQLGKSGNTHSEASSVSGGVLDDLDPLNGFSKSVPPLYSARNNRGTGGSP
QRAGSGTSDTQASSSRENIGKSSDSRSQKKVPEDGFQDSPLFDMPSGDPQRSFGPAGSPP
SYASSNIHETHFESDTSPRSEDQMQPSDDVWLSVSEIPLFTQPTRAPPPSRPPPPIPRRN
FKSEASSFASNARKKGDRYSSSPSYNQYSQSPKVVRPAAKSPPTSQLDELDEFAMGKSPH
SVDESAGVLSGEDMNANSVAAASAAAMKEAMDRAQAKFRHAKEVRERESAKAAKSKEAVN
LDRDEQAMHETQEKELRENKERLERERQQREKEEEERAQWKLERERERAREVERDRGRQA
VERATREARERAAADARERAAAAARLKTERAAVERAGAEARERAERAAVQRAQAEARERA
SAEAKERAEKVAAEAREKEAREKASAAKAEAEVRRRAERAAVERAAAEARERAAAAARMN
QQKNDDDLESFFNMGSRANSAPKTRTSSVNETSFASQFQNKAGAGGSKPTFSSTTTSSNR
TKASSTTSFADDLSSIFGAATSSGDFQEVEGETEERRRARLERHQRTQERAAKALAEKNQ
RDLQVQMEQQERHRISETLDIEIKRWAAGKEGNLRALLSTMQYVLWPECGWQPVSLTDLI
TGASVKKVYRKATLCIHPDKVQQKGATLQQKYVAEKVFDMLKEAWNKFNSEELF*

Transcript Sequence

Transcript ID

PGSC0003DMT400071173
Transcript Infomation

pacid=37450928 locus=PGSC0003DMG402027680 ID=PGSC0003DMT400071173.v4.03 annot-version=v4.03
Sequence

ATGGATGACCTAGATATGCTGACCCGAGATTACGGGTTTAGACCCGGTGGAAAATCGGCT
CCGATGAGATCCGACGGTGGAGATCGTCGTTCCTCTTCCGTACGATCATCGTCATCTTCA
CCGTTGTATGATGATTCTGATGGTTTATTGTACAAAGACGTGTTCGGTGGACCTCCAAAA
TACACCAAGTCTAGTAATAACAACAGTAAATCTTCGTCGATGAATGATATCAATTACGAT
TCAATTTTCAATACTGGCAATGATTCGAATAGCTATATCAACAACAATAAGACATCGTCC
GTTCCGGTGTATGACAAGCCAGTGTACGACGAGGATATTTTTGATGGATTGCCAGGACTG
AAGAACAAATCGGAATCTGAAAAATCTGCATCCACTGTGAGATTTGACGACAACGTTTTT
GCTACAATGACTTCGCCACCACAACCAAAGATGAAGGACGAACATTTTGGTGATCTGCTT
GGGAATTTGAAGTCGAATGAGAAGGTAACAGAGCCTAGGAGTAGTACGAGCTCGAGTGCC
AAAGAGTTTGATGATTTGTTAGCTGGTTTTGGGAGTAGCACTTCCACCACTAATAAGAGG
TCATTCACAGAGTCTAGTCATTACTCCAAACCCACTGGAAATTCAAATCAAAGTTCTATT
GGTTTGGATGACCCTTTTGCAGGTTTAGGGTCAACCTCAATGCCGGCTTCGTCTAATCCG
GGGGAGTTCATGGATCCACTTGAACAGATTGGTCAGCTAGGTAAATCTGGAAATACACAC
TCTGAAGCTTCATCGGTTAGTGGAGGAGTTCTTGATGATTTAGATCCACTGAATGGTTTT
AGTAAGTCTGTCCCTCCATTATACTCTGCTAGGAATAACAGAGGGACGGGAGGGAGTCCT
CAGAGGGCAGGATCAGGAACGAGTGACACACAAGCCTCTTCTTCTAGAGAAAATATCGGA
AAATCTTCTGATAGCCGCTCACAGAAAAAGGTGCCTGAGGATGGTTTTCAGGACTCTCCT
CTGTTTGACATGCCTTCAGGTGATCCTCAGAGATCTTTTGGTCCAGCTGGCTCCCCCCCT
TCATATGCAAGTAGCAATATTCATGAAACACACTTTGAATCAGATACGTCCCCAAGATCA
GAGGACCAAATGCAGCCTTCTGATGATGTATGGCTTAGTGTATCAGAGATTCCTCTTTTT
ACACAACCTACAAGAGCTCCACCTCCATCACGACCTCCTCCTCCAATTCCACGGCGAAAT
TTTAAGTCAGAGGCTAGTTCCTTTGCTTCAAATGCAAGAAAGAAGGGTGACAGATATTCT
TCTTCTCCAAGTTACAACCAATACTCTCAAAGTCCTAAGGTTGTTCGTCCTGCAGCCAAG
AGCCCTCCAACTTCTCAGTTGGATGAACTTGATGAATTTGCCATGGGTAAATCTCCCCAC
AGTGTGGATGAAAGTGCAGGAGTTCTTTCTGGTGAAGATATGAATGCAAACTCAGTAGCT
GCTGCATCAGCAGCAGCGATGAAGGAGGCTATGGATAGAGCTCAAGCCAAATTTAGACAT
GCTAAGGAAGTTCGAGAAAGAGAATCTGCAAAGGCAGCTAAGAGTAAGGAGGCTGTAAAC
CTGGACAGGGATGAACAAGCCATGCATGAGACACAAGAAAAAGAATTGAGAGAAAACAAG
GAGAGATTAGAACGTGAACGTCAACAGAGGGAAAAAGAAGAGGAAGAGAGAGCACAATGG
AAACTTGAGAGGGAGAGGGAGAGAGCCAGAGAGGTAGAGAGAGATAGGGGTAGGCAAGCT
GTAGAAAGGGCTACTAGGGAAGCACGAGAAAGAGCAGCAGCAGACGCTAGAGAAAGAGCA
GCTGCTGCTGCTCGTTTAAAAACCGAAAGAGCTGCTGTGGAGAGGGCTGGTGCTGAAGCT
CGAGAACGGGCTGAAAGGGCTGCAGTTCAGCGAGCACAAGCAGAAGCCCGTGAAAGAGCT
TCTGCAGAAGCTAAAGAAAGAGCAGAAAAGGTAGCTGCAGAAGCAAGGGAAAAAGAAGCA
CGCGAAAAAGCTTCAGCTGCAAAGGCTGAGGCTGAGGTAAGACGTCGAGCAGAACGAGCT
GCAGTAGAAAGAGCTGCTGCAGAGGCTCGAGAAAGGGCAGCTGCTGCTGCAAGGATGAAC
CAACAAAAGAATGATGATGATCTTGAATCCTTTTTCAATATGGGTTCTAGAGCCAATAGT
GCACCAAAGACAAGAACAAGTTCTGTAAATGAGACTTCATTTGCTTCACAGTTCCAGAAC
AAGGCAGGTGCTGGAGGGTCAAAGCCAACATTTTCATCTACCACAACCTCCTCCAACAGG
ACAAAGGCATCTTCAACAACAAGTTTTGCTGATGATCTCTCTTCAATATTTGGAGCTGCC
ACTTCATCTGGAGATTTCCAAGAGGTTGAAGGGGAAACCGAAGAAAGAAGAAGAGCTAGA
TTGGAACGCCATCAACGAACTCAGGAGCGTGCGGCCAAAGCTTTGGCTGAAAAGAATCAA
CGTGACCTTCAAGTTCAGATGGAGCAGCAGGAAAGACACAGAATATCTGAGACCCTAGAT
ATTGAAATCAAGCGATGGGCTGCTGGGAAAGAAGGAAATCTTCGTGCATTGCTATCAACT
ATGCAATATGTGCTTTGGCCTGAATGCGGTTGGCAGCCTGTTTCTTTGACGGATTTAATT
ACTGGTGCTTCTGTAAAAAAGGTGTATAGAAAAGCAACATTGTGTATCCATCCCGATAAA
GTGCAGCAGAAAGGTGCCACCCTTCAACAGAAATATGTTGCTGAGAAGGTGTTTGACATG
CTCAAGGAAGCATGGAACAAATTCAATTCAGAGGAGCTTTTCTAG