Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071148
CDS Infomation

pacid=37452106 polypeptide=PGSC0003DMP400048116 locus=PGSC0003DMG400027669 ID=PGSC0003DMT400071148.v4.03 annot-version=v4.03
Sequence

ATGGTGGTTTCCTTTTTCTTCATTTTCTTCCTCTGTTTTTCACCTCAGTACTATTACTTA
TCATTTGCCACCACCGCCGCCGCCGTCTTCTCCGGAAACAACCGCCGTGTTCTCCATGAA
CCCTTTTTCCCATTAGACTCACCACCACCATCTTCTCAACCACCCATACCTTCTCCTCCA
GCCCCTACAGAGTACCCATTTCAAGGCTCTACTACTACTCCTGATAACAGTGATAATAAC
CCCTTTTTCCCTACTTACCCTTCTCCTCCACTTCCCCCTGATTCACCTGCTGATTTTGTT
CCTGCAAATGTTTCTTCTATTATCCTTCCAAATACCTCCAAATCTAACCCTGTTTCAAAT
AAACTTATTGTCACTGCTATTATCTCTGTTCTTGCTGCTGTCATTGTTCTATCTATTGCT
ATCTTTTTACATATACGAAAGCGAAGGAAACAGAGTGACCGGAAAACTCAAAGATCTGAT
AGTAATAGCAATGGGTTGAGTCGGGATGGTGCTAGGAGTGATGGTAATAATGGTGTTCCT
AAGCTTCAAAGACCGTCTCAAACTAGTTCGGAGTTTCTCTATTTGGGTACTCTTGCTAGC
TCACATGGCGGAGTTGAAACACATAATGCTCAGAATCGTAATGGTAGTAACACTAGCTCT
ACTCCTTCTTCGAGAAAAATGGACTCGCCGGAGCTCCGTCCATTGCCGCCGTTGCATGGA
CGGAATTTGAGACAGAGTTATGGGAATACCAGGTTTTTCTCCGGTACTGCTGAAAATGAT
GTAGATTTTTACTCTTCTGCGGGATCTATGGGTGGTAGAGAGAGTTCAATCGGAGGTGAC
TCACTGTCCCGGAGAGATTTTTCTGCTGTTGAAGTTGAGAAATTTGTTGGCTGTAGCTCA
TCTTCTTCGAGTTCGTCCTCGAGTTCCGGGTCCGGTTCGCCGGTCCGGTCTGTATCGCTG
AGCATTTCGCCGCCGGCGAGTTTGAGTCCGGAAAGGAAAAGTGTAAGACCCAAGTCACCG
GAACTGGTCGCTGTTGACACCGCTCCACCACCTCAGTATCCACCTCCTCCTCCACCGCCA
CCGGCGACTATTGTGCCACCATTTGCAGAATCTCCATCTCCATCACCATCACCTCCATGC
CCATTATCACCAGAGAGATATTCAACCAGAAGTATGGACTCATCTCCGGGAATTTTCAAT
CTTTTGGATCAGGATGTTCAGTTTCCGGCGAGAATCAGAAATCACATTCAGCAAGCCACA
CCAGCTTTTGGACCACCACCGCCACGTCCGCCACCACCTCCACCACCTCGGTCTAAGAAT
ATGGAAAGCCCCAAAACACCCTCACCTCCATTTTCAAAGCCAGCATTTAACCCTCCAGTT
CTTGAATCTCCTTTAAAACCCATAGGAATTGAGAGTCCAGTATTGGTTTCTCCAATGGAG
TTGCCTTCTATTTCGGAACATATTGAGAAGAATGATGAGAAAACTGAGGAACCCAAACCA
AAGCTGAAAACTTTGCATTGGGATAAAGTGAGAGCAAGTTCGGATCGCGAAATGGTTTGG
GATCAACTGAAATCAAGCTCATTTAAGTATGATAATCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048116
PEP Infomation

pacid=37452106 transcript=PGSC0003DMT400071148 locus=PGSC0003DMG400027669 ID=PGSC0003DMT400071148.v4.03 annot-version=v4.03
Sequence

MVVSFFFIFFLCFSPQYYYLSFATTAAAVFSGNNRRVLHEPFFPLDSPPPSSQPPIPSPP
APTEYPFQGSTTTPDNSDNNPFFPTYPSPPLPPDSPADFVPANVSSIILPNTSKSNPVSN
KLIVTAIISVLAAVIVLSIAIFLHIRKRRKQSDRKTQRSDSNSNGLSRDGARSDGNNGVP
KLQRPSQTSSEFLYLGTLASSHGGVETHNAQNRNGSNTSSTPSSRKMDSPELRPLPPLHG
RNLRQSYGNTRFFSGTAENDVDFYSSAGSMGGRESSIGGDSLSRRDFSAVEVEKFVGCSS
SSSSSSSSSGSGSPVRSVSLSISPPASLSPERKSVRPKSPELVAVDTAPPPQYPPPPPPP
PATIVPPFAESPSPSPSPPCPLSPERYSTRSMDSSPGIFNLLDQDVQFPARIRNHIQQAT
PAFGPPPPRPPPPPPPRSKNMESPKTPSPPFSKPAFNPPVLESPLKPIGIESPVLVSPME
LPSISEHIEKNDEKTEEPKPKLKTLHWDKVRASSDREMVWDQLKSSSFKYDNL*

Transcript Sequence

Transcript ID

PGSC0003DMT400071148
Transcript Infomation

pacid=37452106 locus=PGSC0003DMG400027669 ID=PGSC0003DMT400071148.v4.03 annot-version=v4.03
Sequence

ATGGTGGTTTCCTTTTTCTTCATTTTCTTCCTCTGTTTTTCACCTCAGTACTATTACTTA
TCATTTGCCACCACCGCCGCCGCCGTCTTCTCCGGAAACAACCGCCGTGTTCTCCATGAA
CCCTTTTTCCCATTAGACTCACCACCACCATCTTCTCAACCACCCATACCTTCTCCTCCA
GCCCCTACAGAGTACCCATTTCAAGGCTCTACTACTACTCCTGATAACAGTGATAATAAC
CCCTTTTTCCCTACTTACCCTTCTCCTCCACTTCCCCCTGATTCACCTGCTGATTTTGTT
CCTGCAAATGTTTCTTCTATTATCCTTCCAAATACCTCCAAATCTAACCCTGTTTCAAAT
AAACTTATTGTCACTGCTATTATCTCTGTTCTTGCTGCTGTCATTGTTCTATCTATTGCT
ATCTTTTTACATATACGAAAGCGAAGGAAACAGAGTGACCGGAAAACTCAAAGATCTGAT
AGTAATAGCAATGGGTTGAGTCGGGATGGTGCTAGGAGTGATGGTAATAATGGTGTTCCT
AAGCTTCAAAGACCGTCTCAAACTAGTTCGGAGTTTCTCTATTTGGGTACTCTTGCTAGC
TCACATGGCGGAGTTGAAACACATAATGCTCAGAATCGTAATGGTAGTAACACTAGCTCT
ACTCCTTCTTCGAGAAAAATGGACTCGCCGGAGCTCCGTCCATTGCCGCCGTTGCATGGA
CGGAATTTGAGACAGAGTTATGGGAATACCAGGTTTTTCTCCGGTACTGCTGAAAATGAT
GTAGATTTTTACTCTTCTGCGGGATCTATGGGTGGTAGAGAGAGTTCAATCGGAGGTGAC
TCACTGTCCCGGAGAGATTTTTCTGCTGTTGAAGTTGAGAAATTTGTTGGCTGTAGCTCA
TCTTCTTCGAGTTCGTCCTCGAGTTCCGGGTCCGGTTCGCCGGTCCGGTCTGTATCGCTG
AGCATTTCGCCGCCGGCGAGTTTGAGTCCGGAAAGGAAAAGTGTAAGACCCAAGTCACCG
GAACTGGTCGCTGTTGACACCGCTCCACCACCTCAGTATCCACCTCCTCCTCCACCGCCA
CCGGCGACTATTGTGCCACCATTTGCAGAATCTCCATCTCCATCACCATCACCTCCATGC
CCATTATCACCAGAGAGATATTCAACCAGAAGTATGGACTCATCTCCGGGAATTTTCAAT
CTTTTGGATCAGGATGTTCAGTTTCCGGCGAGAATCAGAAATCACATTCAGCAAGCCACA
CCAGCTTTTGGACCACCACCGCCACGTCCGCCACCACCTCCACCACCTCGGTCTAAGAAT
ATGGAAAGCCCCAAAACACCCTCACCTCCATTTTCAAAGCCAGCATTTAACCCTCCAGTT
CTTGAATCTCCTTTAAAACCCATAGGAATTGAGAGTCCAGTATTGGTTTCTCCAATGGAG
TTGCCTTCTATTTCGGAACATATTGAGAAGAATGATGAGAAAACTGAGGAACCCAAACCA
AAGCTGAAAACTTTGCATTGGGATAAAGTGAGAGCAAGTTCGGATCGCGAAATGGTTTGG
GATCAACTGAAATCAAGCTCATTTAAGTATGATAATCTGTAA