Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071111
CDS Infomation

pacid=37431636 polypeptide=PGSC0003DMP400048095 locus=PGSC0003DMG400027652 ID=PGSC0003DMT400071111.v4.03 annot-version=v4.03
Sequence

ATGGCAGATGATGGAGAAGACATGACCCCATTTTGGCTACAAAACACCACCAATCTCCGC
CGTACAGAGAGGCTACGCCACCGGGTGTCGTCTCTCTTCTTTAACGCCGGACTGTTGCTC
ATTATTCTGCTGGTGATGGCGATTCTCTTTGTAGTTTTCATAGTTCCTTCAACACTGTCT
ATATTTAAACCAACCAATGTAAAGAAAAGCTGGGATTCCGTGAATGTAGTGTTGGTTCTA
GTTGCTGTGATTTTTGGTTTTCTCAGTAGAAACAACAATGAAGAACAAACAGTATCTCCG
GTTAACAGAAATCAAGTTCAGAAATCGAATCCATCAACGCCAAATAGTCGATGGTTTAGT
GAAGTTCGAAATTCAAATCCGAATCCAATAACACCACGAACATGGTTCGATAATGGAGAA
CGGGATTGTTTTCGCAATAATGGTGGCGGAGGAGGTGGATTGAGGAGGAGTTTTAGTTCG
TATCCTGATCTGTGTGAAGTATCGCCGCGGTGGATCACGGCGGAAGATCAATGGCGGTTC
TATGATGATACTCATGTGGATAGTCATAGATTTTCCGATCCCGGTCAGCTTAATCGCCGT
CGTAGCTGGAGAGAAGTTGATCGTTCACCGGAACCTGAAATTAAAACTATTTATGAAGAT
CATTTAAGATCTAATAATGTTCCTACATTTACTCCACCAGCTTCAATTCCGGCGCCGTTC
TCTCCGCCTTCACCGCCGCCAGCTCCGGCACTGGTATATGAGGAGAAAGTGAAGAGAGCA
TCTCATAGTGTTCGGCGTAAAAAGGAGGGAGCAAGTAAAAAGAGGGAAAATCATGAGCGA
GAAGCAAATAAAGTTATTATGGCACCGGCGACGCTTCCTCCACCACCTCCACCGCCACCG
CCGCCGCCTCCATTGTCACAATATGTGGAGCCGAGGAGCAGTAAAAGCGATCGGAAAAGA
GGTGGTGCAAGTGCGACGAAGGAGTTTATTAACTCTTTGTATCACAAAAAGAAGAGAAAA
AACAGATCAAAAAGTGTTGATAATTTTGACGCTCTTCTCCACAAATCAGAACCACCTCCT
CTCCATTACCAACGGCCGGCATCCTCCACTCCACCACCGCCTCCTCCGCCACCGCCACCA
CCTTCTTCTCTGTTTCAAAACTTATTCACATCCAAAAAGGCCAGAAAAAAGAGAAATGCA
CCTCCACCACCGCCACCACCTCCTCCGCCAGTCAAGGCAGTGCCAGTCAGGATATCAAGA
CCAAATACCCCTTTCACCAGAACTCCAGCACCAAAGCCAGTGAAAATAAGAAGCTTCGAC
AGTGTCGAAGAAAACCCAAACAGCGGAGGAGAATCGCCGTTGATACCAATTCCACCACCA
CCTCCACCGCCTCCATTCTTCAGAAAACACGCCTGGAAATTCGTAGTAGAAGGCGATTAC
GTGAGAATAGACAGCACCGTCAGCTCACGTTCTGGGTCGCCCGAACTTGAAGATATAGAT
TCAGCCGAAAACACCCCGATGGCGGAAGACGCCGGCGCCGGTGAACGGATGGCGTTTGCA
CCGTCACCGTTGTTCTGTCCAAGCCCAGATGTAAACACAAAAGCTGAAAACTTCATATCA
AAATTTAGAGCTGGATTAAAGCTAGAAAAAATCAACTCCTTCAACAAAAATGATCAAGGA
CGAAGCTTATCAAATCTAGGCCCAGGAGTAGGCCACAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400048095
PEP Infomation

pacid=37431636 transcript=PGSC0003DMT400071111 locus=PGSC0003DMG400027652 ID=PGSC0003DMT400071111.v4.03 annot-version=v4.03
Sequence

MADDGEDMTPFWLQNTTNLRRTERLRHRVSSLFFNAGLLLIILLVMAILFVVFIVPSTLS
IFKPTNVKKSWDSVNVVLVLVAVIFGFLSRNNNEEQTVSPVNRNQVQKSNPSTPNSRWFS
EVRNSNPNPITPRTWFDNGERDCFRNNGGGGGGLRRSFSSYPDLCEVSPRWITAEDQWRF
YDDTHVDSHRFSDPGQLNRRRSWREVDRSPEPEIKTIYEDHLRSNNVPTFTPPASIPAPF
SPPSPPPAPALVYEEKVKRASHSVRRKKEGASKKRENHEREANKVIMAPATLPPPPPPPP
PPPPLSQYVEPRSSKSDRKRGGASATKEFINSLYHKKKRKNRSKSVDNFDALLHKSEPPP
LHYQRPASSTPPPPPPPPPPPSSLFQNLFTSKKARKKRNAPPPPPPPPPPVKAVPVRISR
PNTPFTRTPAPKPVKIRSFDSVEENPNSGGESPLIPIPPPPPPPPFFRKHAWKFVVEGDY
VRIDSTVSSRSGSPELEDIDSAENTPMAEDAGAGERMAFAPSPLFCPSPDVNTKAENFIS
KFRAGLKLEKINSFNKNDQGRSLSNLGPGVGHS*

Transcript Sequence

Transcript ID

PGSC0003DMT400071111
Transcript Infomation

pacid=37431636 locus=PGSC0003DMG400027652 ID=PGSC0003DMT400071111.v4.03 annot-version=v4.03
Sequence

ATGGCAGATGATGGAGAAGACATGACCCCATTTTGGCTACAAAACACCACCAATCTCCGC
CGTACAGAGAGGCTACGCCACCGGGTGTCGTCTCTCTTCTTTAACGCCGGACTGTTGCTC
ATTATTCTGCTGGTGATGGCGATTCTCTTTGTAGTTTTCATAGTTCCTTCAACACTGTCT
ATATTTAAACCAACCAATGTAAAGAAAAGCTGGGATTCCGTGAATGTAGTGTTGGTTCTA
GTTGCTGTGATTTTTGGTTTTCTCAGTAGAAACAACAATGAAGAACAAACAGTATCTCCG
GTTAACAGAAATCAAGTTCAGAAATCGAATCCATCAACGCCAAATAGTCGATGGTTTAGT
GAAGTTCGAAATTCAAATCCGAATCCAATAACACCACGAACATGGTTCGATAATGGAGAA
CGGGATTGTTTTCGCAATAATGGTGGCGGAGGAGGTGGATTGAGGAGGAGTTTTAGTTCG
TATCCTGATCTGTGTGAAGTATCGCCGCGGTGGATCACGGCGGAAGATCAATGGCGGTTC
TATGATGATACTCATGTGGATAGTCATAGATTTTCCGATCCCGGTCAGCTTAATCGCCGT
CGTAGCTGGAGAGAAGTTGATCGTTCACCGGAACCTGAAATTAAAACTATTTATGAAGAT
CATTTAAGATCTAATAATGTTCCTACATTTACTCCACCAGCTTCAATTCCGGCGCCGTTC
TCTCCGCCTTCACCGCCGCCAGCTCCGGCACTGGTATATGAGGAGAAAGTGAAGAGAGCA
TCTCATAGTGTTCGGCGTAAAAAGGAGGGAGCAAGTAAAAAGAGGGAAAATCATGAGCGA
GAAGCAAATAAAGTTATTATGGCACCGGCGACGCTTCCTCCACCACCTCCACCGCCACCG
CCGCCGCCTCCATTGTCACAATATGTGGAGCCGAGGAGCAGTAAAAGCGATCGGAAAAGA
GGTGGTGCAAGTGCGACGAAGGAGTTTATTAACTCTTTGTATCACAAAAAGAAGAGAAAA
AACAGATCAAAAAGTGTTGATAATTTTGACGCTCTTCTCCACAAATCAGAACCACCTCCT
CTCCATTACCAACGGCCGGCATCCTCCACTCCACCACCGCCTCCTCCGCCACCGCCACCA
CCTTCTTCTCTGTTTCAAAACTTATTCACATCCAAAAAGGCCAGAAAAAAGAGAAATGCA
CCTCCACCACCGCCACCACCTCCTCCGCCAGTCAAGGCAGTGCCAGTCAGGATATCAAGA
CCAAATACCCCTTTCACCAGAACTCCAGCACCAAAGCCAGTGAAAATAAGAAGCTTCGAC
AGTGTCGAAGAAAACCCAAACAGCGGAGGAGAATCGCCGTTGATACCAATTCCACCACCA
CCTCCACCGCCTCCATTCTTCAGAAAACACGCCTGGAAATTCGTAGTAGAAGGCGATTAC
GTGAGAATAGACAGCACCGTCAGCTCACGTTCTGGGTCGCCCGAACTTGAAGATATAGAT
TCAGCCGAAAACACCCCGATGGCGGAAGACGCCGGCGCCGGTGAACGGATGGCGTTTGCA
CCGTCACCGTTGTTCTGTCCAAGCCCAGATGTAAACACAAAAGCTGAAAACTTCATATCA
AAATTTAGAGCTGGATTAAAGCTAGAAAAAATCAACTCCTTCAACAAAAATGATCAAGGA
CGAAGCTTATCAAATCTAGGCCCAGGAGTAGGCCACAGTTAG