Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071110
CDS Infomation

pacid=37434812 polypeptide=PGSC0003DMP400048094 locus=PGSC0003DMG400027651 ID=PGSC0003DMT400071110.v4.03 annot-version=v4.03
Sequence

ATGCAGGTAGCTGTTGCTCTCTCACATGCTGCCATCTTGGAGGAATCAATGAGGGCTCGA
GATCTTCTTATGGAGCAGAATGTGGCTCTTGATCTGGCAAGAAGAGAAGCAGAAACAGCT
GTTCGTGCGCGTAATGATTTCCTGGGTGTTATGAATCATGAAATGAGAACTCCCATGCAT
GCAGTGATTGCACTTTCATCTTTGCTGCAAGAAAGTGAACTGACACCGGAGCAGCGTCTG
ATGGTGGAAACAATCCTAAAGAGCAGCAACCTTTTAGCAACTCTCATCAATGATGTCTTG
GATCTTTCAAGGCTAGAGGATGGAAGCCTTCAACTTGATGTTGGGACTTTCAATCTTCAT
GCTCTCTTCAGAGAGGTCCTCAACTTAATCAAGCCTATTGCAGCTGTAAAGAAGCTGTTT
GTCACGCTTAGTTTGTCTTCGGATTTGCCGGAAGTTGCTATTGGAGATGAAAAACGGCTT
ATGCAAATTCTTTTAAATGTTGTTGGCAATGCTGTAAAATTTTCAAAAGAAGGCAGTGTG
TCAGTTGCTGCAGTTGCTGCAAAATCAGAATCTTTAATAGATCCTAGAGCTCCAGAGTTT
TTTCCTGTGCAAAGTGAGAATCACTTCTATTTGCGTGTACAGGTAAAAGATACAGGATCA
GGCATTAATCCTCAGGATATCCCCAAGTTGTTCTGTAAATTTGCGCAGAACCAGGAACTA
GCAACTAAAAATTCTGGTGGCACTGGACTTGGCCTTGCAATTTGTAAGAGGTTTGTTAAT
CTTATGGAAGGACACATTTGGATTGAAAGTGAAGGTGTCGGGAAGGGTTCTACTGCTATC
TTTATTGTTAAACTTGGCATTCCTGGTCGCTTAAATGAGTCAAAGCTTCCCTTTATTCCC
GGATTGCCTGCAAATCACATGCAGATGACTTTTCAAGGACTAAAGGTCTTGGTTATGGAT
GATAATGGGTTTAGCAGGATGGTAACCAAGACTCTTCTAGTGCACCTAGGGTGCGATGTA
ACAACCATTGGCTCGGGTGATGAGTGCTTGAGAGTTCTTACTCGGGAACACAAAGTAGTA
ATCATGGACGTAAGTATAACAGGTATGAACTGTTATGATGTTGCCGTCAGTGTACATGAG
AAATTTGGGAAACGTTACGAGAGGCCACTTATTGTGGCTCTAACAGGGAACACTGACCAA
GTGACAAAAGAAAACTGCATGAGAGTTGGAATGGATGGAGTTATTCTGAAACCTGTTTCA
ATTGACAAAATGACAAGTGTTTTATCCGAGCTTTTAGAGCACAGGGCTGTTCTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048094
PEP Infomation

pacid=37434812 transcript=PGSC0003DMT400071110 locus=PGSC0003DMG400027651 ID=PGSC0003DMT400071110.v4.03 annot-version=v4.03
Sequence

MQVAVALSHAAILEESMRARDLLMEQNVALDLARREAETAVRARNDFLGVMNHEMRTPMH
AVIALSSLLQESELTPEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLDVGTFNLH
ALFREVLNLIKPIAAVKKLFVTLSLSSDLPEVAIGDEKRLMQILLNVVGNAVKFSKEGSV
SVAAVAAKSESLIDPRAPEFFPVQSENHFYLRVQVKDTGSGINPQDIPKLFCKFAQNQEL
ATKNSGGTGLGLAICKRFVNLMEGHIWIESEGVGKGSTAIFIVKLGIPGRLNESKLPFIP
GLPANHMQMTFQGLKVLVMDDNGFSRMVTKTLLVHLGCDVTTIGSGDECLRVLTREHKVV
IMDVSITGMNCYDVAVSVHEKFGKRYERPLIVALTGNTDQVTKENCMRVGMDGVILKPVS
IDKMTSVLSELLEHRAVL*

Transcript Sequence

Transcript ID

PGSC0003DMT400071110
Transcript Infomation

pacid=37434812 locus=PGSC0003DMG400027651 ID=PGSC0003DMT400071110.v4.03 annot-version=v4.03
Sequence

ATGCAGGTAGCTGTTGCTCTCTCACATGCTGCCATCTTGGAGGAATCAATGAGGGCTCGA
GATCTTCTTATGGAGCAGAATGTGGCTCTTGATCTGGCAAGAAGAGAAGCAGAAACAGCT
GTTCGTGCGCGTAATGATTTCCTGGGTGTTATGAATCATGAAATGAGAACTCCCATGCAT
GCAGTGATTGCACTTTCATCTTTGCTGCAAGAAAGTGAACTGACACCGGAGCAGCGTCTG
ATGGTGGAAACAATCCTAAAGAGCAGCAACCTTTTAGCAACTCTCATCAATGATGTCTTG
GATCTTTCAAGGCTAGAGGATGGAAGCCTTCAACTTGATGTTGGGACTTTCAATCTTCAT
GCTCTCTTCAGAGAGGTCCTCAACTTAATCAAGCCTATTGCAGCTGTAAAGAAGCTGTTT
GTCACGCTTAGTTTGTCTTCGGATTTGCCGGAAGTTGCTATTGGAGATGAAAAACGGCTT
ATGCAAATTCTTTTAAATGTTGTTGGCAATGCTGTAAAATTTTCAAAAGAAGGCAGTGTG
TCAGTTGCTGCAGTTGCTGCAAAATCAGAATCTTTAATAGATCCTAGAGCTCCAGAGTTT
TTTCCTGTGCAAAGTGAGAATCACTTCTATTTGCGTGTACAGGTAAAAGATACAGGATCA
GGCATTAATCCTCAGGATATCCCCAAGTTGTTCTGTAAATTTGCGCAGAACCAGGAACTA
GCAACTAAAAATTCTGGTGGCACTGGACTTGGCCTTGCAATTTGTAAGAGGTTTGTTAAT
CTTATGGAAGGACACATTTGGATTGAAAGTGAAGGTGTCGGGAAGGGTTCTACTGCTATC
TTTATTGTTAAACTTGGCATTCCTGGTCGCTTAAATGAGTCAAAGCTTCCCTTTATTCCC
GGATTGCCTGCAAATCACATGCAGATGACTTTTCAAGGACTAAAGGTCTTGGTTATGGAT
GATAATGGGTTTAGCAGGATGGTAACCAAGACTCTTCTAGTGCACCTAGGGTGCGATGTA
ACAACCATTGGCTCGGGTGATGAGTGCTTGAGAGTTCTTACTCGGGAACACAAAGTAGTA
ATCATGGACGTAAGTATAACAGGTATGAACTGTTATGATGTTGCCGTCAGTGTACATGAG
AAATTTGGGAAACGTTACGAGAGGCCACTTATTGTGGCTCTAACAGGGAACACTGACCAA
GTGACAAAAGAAAACTGCATGAGAGTTGGAATGGATGGAGTTATTCTGAAACCTGTTTCA
ATTGACAAAATGACAAGTGTTTTATCCGAGCTTTTAGAGCACAGGGCTGTTCTTTAA