Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071048
CDS Infomation

pacid=37434679 polypeptide=PGSC0003DMP400048044 locus=PGSC0003DMG400027633 ID=PGSC0003DMT400071048.v4.03 annot-version=v4.03
Sequence

ATGGCTTTAGATGCTGTAGAAGGTGCTTTAACAAAACACGAACTCGAGCACCCTTTGCCG
AAAACAGCCGACCCACGAGTCCAGATTTCTGGGAATTTCGCTCCGGTACCGGAAAACCCA
GTTTGCCAATCTCTTCCGGTCACCGGAAAAATACCCAAATGTGTTCAAGGCGTTTACGTT
CGAAACGGAGCTAACCCTCTTTTCGAACCAACCGCCGGACACCATTTCTTCGACGGCGAC
GGTATGGTTCACGCCGTTCAATTCAAAAATGGGTCAGCTAGTTACGCTTGCCGGTTCACT
GAAACAGAGAGGTTTGTTCAAGAAAAAGCTTTGGGTCGCCCTGTTTTCCCTAAAGCCATT
GGTGAATTACATGGTCACTCTGGAATTGCAAGGCTTATGCTGTTTTACGCTCGTGGGCTC
TTCGGACTTATTGATCACAGTAGAGGAACTGGAGTTGCAAACGCCGGTTTAGTCTATTTC
AATAACCGATTACTTGCTATGTCTGAAGATGATTTGCCTTACCATGTAAAGGTAACACCC
ACCGGCGATCTTAAAACAGAGGGTCGATTCGATTTCGACGGCCAGCTAAAATCCACCATG
ATAGCTCACCCAAAGCTCGACCCAGTTTCCGGTGAGCTATTTGCTCTTAGCTACGATGTG
ATTCAGAAGCCATACCTCAAGTATTTCAGATTTTCAAAAAATGGGGAAAAATCAAATGAT
GTTGAAATCCCAGTTGAAGACCCAACAATGATGCATGATTTCGCAATTACTGAGAAATTC
GTCATCATTCCTGATCAACAAGTCGTTTTCAAGATGTCTGAAATGATCCGTGGAGGTTCA
CCGGTGGTTTACGACAAGAACAAAGTGTCCCGATTTGGGATTCTGGATAAGTACGCGAAA
GATGGGTCTGATTTGAAATGGGTTGAAGTTCCTGATTGTTTCTGTTTCCATCTCTGGAAT
GCTTGGGAAGAACCAGAAACAGATGAAATCGTTGTAATTGGTTCATGTATGACACCACCA
GACTCCATTTTCAATGAATGTGATGAAGGACTAAAAAGCGTTTTATCCGAAATTCGTCTC
AATTTGAAAACAGGGAAATCAACAAGAAAAGCCATAATCGAAAACCCGGATGAACAAGTG
AATTTAGAAGCTGGAATGGTGAACAGAAACAAACTTGGAAGGAAAACACAGTATGCTTAT
TTGGCTATTGCTGAACCATGGCCAAAAGTTTCTGGTTTTGCAAAAGTAGACCTGTTTACA
GGTGAAGTTGAGAAATTCATTTATGGTGACAACAAATATGGTGGGGAGCCTCTTTTTTTA
CCAAGAGACCCAAACAGCAAGGAGGAAGACGATGGTTATATTTTAGCTTTCGTTCATGAT
GAGAAAGAATGGACATCAGAGCTTCAAATTGTTAATGCAATGACTTTAAAGTTAGAGGCA
ACAGTGAAACTTCCATCAAGAGTTCCTTATGGTTTTCATGGAACTTTCATAAATGCAAAT
GATTTGGCAAATCAGGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400048044
PEP Infomation

pacid=37434679 transcript=PGSC0003DMT400071048 locus=PGSC0003DMG400027633 ID=PGSC0003DMT400071048.v4.03 annot-version=v4.03
Sequence

MALDAVEGALTKHELEHPLPKTADPRVQISGNFAPVPENPVCQSLPVTGKIPKCVQGVYV
RNGANPLFEPTAGHHFFDGDGMVHAVQFKNGSASYACRFTETERFVQEKALGRPVFPKAI
GELHGHSGIARLMLFYARGLFGLIDHSRGTGVANAGLVYFNNRLLAMSEDDLPYHVKVTP
TGDLKTEGRFDFDGQLKSTMIAHPKLDPVSGELFALSYDVIQKPYLKYFRFSKNGEKSND
VEIPVEDPTMMHDFAITEKFVIIPDQQVVFKMSEMIRGGSPVVYDKNKVSRFGILDKYAK
DGSDLKWVEVPDCFCFHLWNAWEEPETDEIVVIGSCMTPPDSIFNECDEGLKSVLSEIRL
NLKTGKSTRKAIIENPDEQVNLEAGMVNRNKLGRKTQYAYLAIAEPWPKVSGFAKVDLFT
GEVEKFIYGDNKYGGEPLFLPRDPNSKEEDDGYILAFVHDEKEWTSELQIVNAMTLKLEA
TVKLPSRVPYGFHGTFINANDLANQA*

Transcript Sequence

Transcript ID

PGSC0003DMT400071048
Transcript Infomation

pacid=37434679 locus=PGSC0003DMG400027633 ID=PGSC0003DMT400071048.v4.03 annot-version=v4.03
Sequence

ATGGCTTTAGATGCTGTAGAAGGTGCTTTAACAAAACACGAACTCGAGCACCCTTTGCCG
AAAACAGCCGACCCACGAGTCCAGATTTCTGGGAATTTCGCTCCGGTACCGGAAAACCCA
GTTTGCCAATCTCTTCCGGTCACCGGAAAAATACCCAAATGTGTTCAAGGCGTTTACGTT
CGAAACGGAGCTAACCCTCTTTTCGAACCAACCGCCGGACACCATTTCTTCGACGGCGAC
GGTATGGTTCACGCCGTTCAATTCAAAAATGGGTCAGCTAGTTACGCTTGCCGGTTCACT
GAAACAGAGAGGTTTGTTCAAGAAAAAGCTTTGGGTCGCCCTGTTTTCCCTAAAGCCATT
GGTGAATTACATGGTCACTCTGGAATTGCAAGGCTTATGCTGTTTTACGCTCGTGGGCTC
TTCGGACTTATTGATCACAGTAGAGGAACTGGAGTTGCAAACGCCGGTTTAGTCTATTTC
AATAACCGATTACTTGCTATGTCTGAAGATGATTTGCCTTACCATGTAAAGGTAACACCC
ACCGGCGATCTTAAAACAGAGGGTCGATTCGATTTCGACGGCCAGCTAAAATCCACCATG
ATAGCTCACCCAAAGCTCGACCCAGTTTCCGGTGAGCTATTTGCTCTTAGCTACGATGTG
ATTCAGAAGCCATACCTCAAGTATTTCAGATTTTCAAAAAATGGGGAAAAATCAAATGAT
GTTGAAATCCCAGTTGAAGACCCAACAATGATGCATGATTTCGCAATTACTGAGAAATTC
GTCATCATTCCTGATCAACAAGTCGTTTTCAAGATGTCTGAAATGATCCGTGGAGGTTCA
CCGGTGGTTTACGACAAGAACAAAGTGTCCCGATTTGGGATTCTGGATAAGTACGCGAAA
GATGGGTCTGATTTGAAATGGGTTGAAGTTCCTGATTGTTTCTGTTTCCATCTCTGGAAT
GCTTGGGAAGAACCAGAAACAGATGAAATCGTTGTAATTGGTTCATGTATGACACCACCA
GACTCCATTTTCAATGAATGTGATGAAGGACTAAAAAGCGTTTTATCCGAAATTCGTCTC
AATTTGAAAACAGGGAAATCAACAAGAAAAGCCATAATCGAAAACCCGGATGAACAAGTG
AATTTAGAAGCTGGAATGGTGAACAGAAACAAACTTGGAAGGAAAACACAGTATGCTTAT
TTGGCTATTGCTGAACCATGGCCAAAAGTTTCTGGTTTTGCAAAAGTAGACCTGTTTACA
GGTGAAGTTGAGAAATTCATTTATGGTGACAACAAATATGGTGGGGAGCCTCTTTTTTTA
CCAAGAGACCCAAACAGCAAGGAGGAAGACGATGGTTATATTTTAGCTTTCGTTCATGAT
GAGAAAGAATGGACATCAGAGCTTCAAATTGTTAATGCAATGACTTTAAAGTTAGAGGCA
ACAGTGAAACTTCCATCAAGAGTTCCTTATGGTTTTCATGGAACTTTCATAAATGCAAAT
GATTTGGCAAATCAGGCATGA