Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400071012
CDS Infomation

pacid=37464250 polypeptide=PGSC0003DMP400048015 locus=PGSC0003DMG400027619 ID=PGSC0003DMT400071012.v4.03 annot-version=v4.03
Sequence

ATGGATACAACAATATCAGTTCTTACAAATAAGCTGAGAGATGCATCCGATTGGGTCACA
TGGATATCCGAGGCTCCTTTTGCAAGAGCTGTGGTGTTTGGAGTTAACATTGGAGGGCAT
CTATTTGTGGAGGGTCTTCTCCTGGTGGTCATCCTTTTCCTACTATCGCAGAAAAGTTAT
AAACCACCTAAAAGACCATTGACAAAGAAGGAAATAGATGAATTGTGTGAGGAATGGGTC
CCAGAACCTCTTATTCCCACCATTACAGATGAGATGAAATCGGAGCCTCCAGTACTTGAA
AGCGCTGCAGGTCCTCATACAACTGTTAATGGCAAGGAAGTAATAAATTTTACTTCAGCT
AATTACCTCGGGTTATTAGGAAATGAAAAGTTACTTGAGGCATGCACCAGGGCATTGGAG
AAATATGGTGTAGGTTCTTGTGGTCCTCGTGGATTCTATGGAACAATTGATGTTCACCTT
GATTGTGAGGCCAGGATAGCTAAGTTTCTTGGAACTCCCGATTCTATACTCTACTCTTAT
GGACTTTCTACCATGTTCAGTGCAATTCCAGCATTTTGCAAGAAGGGAGATGTCATTGTT
GCGGATGAAGGTGTCCATTGGGGAATACAAAATGGACTTCAGCTCTCTAGAAGTACAATC
ATATACTTCAAGCACAATGATATGGAGTCCTTGAGAAATACATTGGAGAAAATCACTCAA
GAAAACAAGCTAGCTAAAAAACTTAGGCGATATATTATTGTTGAAGCAGTATATCAGAAT
TCTGGTCGAATAGCTCCATTGGATGAAATCATCAAACTGAAAGAAAAGTACAGATTCCGG
GTATTGTTGGATGAAAGCAATTCCTTGGGTGTGCTTGGCAGTTCTGGTAAAGGTCTAACA
GAGTATTACAATGTTCCGGTTGACAAGATAGATATCATTACTGCTGCCATGGGTCATGCA
TTGGCCACAGAAGGAGGATTTTGCACCGGGAGTACTAGAGTCATTGAACACCAGCGTCTC
AGTAGCTCTGGTTATGTGTTTTCTGCTTCTTTGCCTCCTTATCTGGCAAGTGCCGCAGTC
AAAGCTTTTGATATCTTGGAAGAAAATCCTGATCTTATCACAAAATTGAGGGAAAACATT
AATATACTGTTTAAAGGTCTACAAGATATTCAGGGGATGGAAATAATGAGCGATCCACTC
TCTCCGATAGTTTTTCTTAGACTCAAGACGTCCACAGGTTCTTCAAAGAGTGACCTAAAA
CTGCTAGAAGATATCGCGAATCTTGTCTTGAAGGAAGATTCCGTTTTTGTTGTTACTTCA
AAGAGATCAACACTTGATAAATGTAAATTGCCAGTTGGGCTTCGATTGTTTGTGTCAGCA
GGGCACTCAGAATCTGATCTGGAGAAAGCTAGTAAATCATTGAAGAGAGTCGTGGCTTCA
CTATTGACAGATCAGAGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400048015
PEP Infomation

pacid=37464250 transcript=PGSC0003DMT400071012 locus=PGSC0003DMG400027619 ID=PGSC0003DMT400071012.v4.03 annot-version=v4.03
Sequence

MDTTISVLTNKLRDASDWVTWISEAPFARAVVFGVNIGGHLFVEGLLLVVILFLLSQKSY
KPPKRPLTKKEIDELCEEWVPEPLIPTITDEMKSEPPVLESAAGPHTTVNGKEVINFTSA
NYLGLLGNEKLLEACTRALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSY
GLSTMFSAIPAFCKKGDVIVADEGVHWGIQNGLQLSRSTIIYFKHNDMESLRNTLEKITQ
ENKLAKKLRRYIIVEAVYQNSGRIAPLDEIIKLKEKYRFRVLLDESNSLGVLGSSGKGLT
EYYNVPVDKIDIITAAMGHALATEGGFCTGSTRVIEHQRLSSSGYVFSASLPPYLASAAV
KAFDILEENPDLITKLRENINILFKGLQDIQGMEIMSDPLSPIVFLRLKTSTGSSKSDLK
LLEDIANLVLKEDSVFVVTSKRSTLDKCKLPVGLRLFVSAGHSESDLEKASKSLKRVVAS
LLTDQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400071012
Transcript Infomation

pacid=37464250 locus=PGSC0003DMG400027619 ID=PGSC0003DMT400071012.v4.03 annot-version=v4.03
Sequence

ATGGATACAACAATATCAGTTCTTACAAATAAGCTGAGAGATGCATCCGATTGGGTCACA
TGGATATCCGAGGCTCCTTTTGCAAGAGCTGTGGTGTTTGGAGTTAACATTGGAGGGCAT
CTATTTGTGGAGGGTCTTCTCCTGGTGGTCATCCTTTTCCTACTATCGCAGAAAAGTTAT
AAACCACCTAAAAGACCATTGACAAAGAAGGAAATAGATGAATTGTGTGAGGAATGGGTC
CCAGAACCTCTTATTCCCACCATTACAGATGAGATGAAATCGGAGCCTCCAGTACTTGAA
AGCGCTGCAGGTCCTCATACAACTGTTAATGGCAAGGAAGTAATAAATTTTACTTCAGCT
AATTACCTCGGGTTATTAGGAAATGAAAAGTTACTTGAGGCATGCACCAGGGCATTGGAG
AAATATGGTGTAGGTTCTTGTGGTCCTCGTGGATTCTATGGAACAATTGATGTTCACCTT
GATTGTGAGGCCAGGATAGCTAAGTTTCTTGGAACTCCCGATTCTATACTCTACTCTTAT
GGACTTTCTACCATGTTCAGTGCAATTCCAGCATTTTGCAAGAAGGGAGATGTCATTGTT
GCGGATGAAGGTGTCCATTGGGGAATACAAAATGGACTTCAGCTCTCTAGAAGTACAATC
ATATACTTCAAGCACAATGATATGGAGTCCTTGAGAAATACATTGGAGAAAATCACTCAA
GAAAACAAGCTAGCTAAAAAACTTAGGCGATATATTATTGTTGAAGCAGTATATCAGAAT
TCTGGTCGAATAGCTCCATTGGATGAAATCATCAAACTGAAAGAAAAGTACAGATTCCGG
GTATTGTTGGATGAAAGCAATTCCTTGGGTGTGCTTGGCAGTTCTGGTAAAGGTCTAACA
GAGTATTACAATGTTCCGGTTGACAAGATAGATATCATTACTGCTGCCATGGGTCATGCA
TTGGCCACAGAAGGAGGATTTTGCACCGGGAGTACTAGAGTCATTGAACACCAGCGTCTC
AGTAGCTCTGGTTATGTGTTTTCTGCTTCTTTGCCTCCTTATCTGGCAAGTGCCGCAGTC
AAAGCTTTTGATATCTTGGAAGAAAATCCTGATCTTATCACAAAATTGAGGGAAAACATT
AATATACTGTTTAAAGGTCTACAAGATATTCAGGGGATGGAAATAATGAGCGATCCACTC
TCTCCGATAGTTTTTCTTAGACTCAAGACGTCCACAGGTTCTTCAAAGAGTGACCTAAAA
CTGCTAGAAGATATCGCGAATCTTGTCTTGAAGGAAGATTCCGTTTTTGTTGTTACTTCA
AAGAGATCAACACTTGATAAATGTAAATTGCCAGTTGGGCTTCGATTGTTTGTGTCAGCA
GGGCACTCAGAATCTGATCTGGAGAAAGCTAGTAAATCATTGAAGAGAGTCGTGGCTTCA
CTATTGACAGATCAGAGCTAG