Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070968
CDS Infomation

pacid=37450011 polypeptide=PGSC0003DMP400047996 locus=PGSC0003DMG400027599 ID=PGSC0003DMT400070968.v4.03 annot-version=v4.03
Sequence

ATGCAAGATCCGTCGAATCCAAACTCCAAGCAGCTCAATCAGACGCCGCCATTTTCGGCT
ACATTCAGGCCATCGCACCATCGCAGAGCTCACTCGGAGGTGAACTTCCGGCTCCCTGAG
GATCTAGATCTGGTATCTGACCCATTCGATGCGTCCGCCGGAAGTTTTGAGGAGATCGGA
TCCGAGGACGATTTCTTCTCCACTTACATGGACATTGAAAAACTTGGCTCTGGATCCAAC
CCTACAGATGTTCCAGGGTTCAACAATGCCGGCGCAGGAAGTAGTGGACTCGTAGCTGAC
TGTGGTGATGGAGAAAGGAATTTCACTAGGCCTAGACACAGGCATAGCAATTCGGTGGAT
AGTTCCAGCCTGCTGCTAAGTGAGAGTATTGAAGCTAAGAAGGCTATGGCTCCTGATAAG
CTTGCTGAACTTTGGACCATTGATCCAAAACGCGCCAAAAGGATTTTGGCGAATCGGCAG
TCTGCTTCTCGCTCGAAAGAGAGAAAGGCCCGTTACATTACTGAACTTGAGAGAAAGGTT
CAGACCCTTCAAACAGAAGCAACCACTCTCTCTGCTCAATTAACCCTTTTCCAGCGGGAT
ACAACACAGTTTACTAACGAGAATACAGAGCTTAAGCTCCGTTTGCAAGCTATGGCACAA
CAAGCTCAGTTACGTGATGCTCTGAATGAAGCCCTGAAGCAGGAAGTGGAAAGACTTAAA
ATGGCCACAGGGGAAATGTCCTCTTCAGATGCATACAATTTGGGGATGCAGCACATTCCA
TATAACCAATCAGCGTTCTTTTCCCATCAGCCACAATCAGGGCCTAGCGAATCCCAGAAC
ATACAGATGCAGCAATTTCATTCCCTCCAGGATAGCTTGTTGAATCCTCATCGCCGTTTA
CTTGCAGGACATGGACAGGTTCTCCAAGACACAATGCAACAGGATCCCCTTGGTCGTTTT
CAAGGTCTCGATATTGGTGGCAGGGGTATGCATCTTGTCAAAACTGAAACACCTTCAATT
TCTGCCAGTGAGAGCAGCAGTACATTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400047996
PEP Infomation

pacid=37450011 transcript=PGSC0003DMT400070968 locus=PGSC0003DMG400027599 ID=PGSC0003DMT400070968.v4.03 annot-version=v4.03
Sequence

MQDPSNPNSKQLNQTPPFSATFRPSHHRRAHSEVNFRLPEDLDLVSDPFDASAGSFEEIG
SEDDFFSTYMDIEKLGSGSNPTDVPGFNNAGAGSSGLVADCGDGERNFTRPRHRHSNSVD
SSSLLLSESIEAKKAMAPDKLAELWTIDPKRAKRILANRQSASRSKERKARYITELERKV
QTLQTEATTLSAQLTLFQRDTTQFTNENTELKLRLQAMAQQAQLRDALNEALKQEVERLK
MATGEMSSSDAYNLGMQHIPYNQSAFFSHQPQSGPSESQNIQMQQFHSLQDSLLNPHRRL
LAGHGQVLQDTMQQDPLGRFQGLDIGGRGMHLVKTETPSISASESSSTL*

Transcript Sequence

Transcript ID

PGSC0003DMT400070968
Transcript Infomation

pacid=37450011 locus=PGSC0003DMG400027599 ID=PGSC0003DMT400070968.v4.03 annot-version=v4.03
Sequence

ATGCAAGATCCGTCGAATCCAAACTCCAAGCAGCTCAATCAGACGCCGCCATTTTCGGCT
ACATTCAGGCCATCGCACCATCGCAGAGCTCACTCGGAGGTGAACTTCCGGCTCCCTGAG
GATCTAGATCTGGTATCTGACCCATTCGATGCGTCCGCCGGAAGTTTTGAGGAGATCGGA
TCCGAGGACGATTTCTTCTCCACTTACATGGACATTGAAAAACTTGGCTCTGGATCCAAC
CCTACAGATGTTCCAGGGTTCAACAATGCCGGCGCAGGAAGTAGTGGACTCGTAGCTGAC
TGTGGTGATGGAGAAAGGAATTTCACTAGGCCTAGACACAGGCATAGCAATTCGGTGGAT
AGTTCCAGCCTGCTGCTAAGTGAGAGTATTGAAGCTAAGAAGGCTATGGCTCCTGATAAG
CTTGCTGAACTTTGGACCATTGATCCAAAACGCGCCAAAAGGATTTTGGCGAATCGGCAG
TCTGCTTCTCGCTCGAAAGAGAGAAAGGCCCGTTACATTACTGAACTTGAGAGAAAGGTT
CAGACCCTTCAAACAGAAGCAACCACTCTCTCTGCTCAATTAACCCTTTTCCAGCGGGAT
ACAACACAGTTTACTAACGAGAATACAGAGCTTAAGCTCCGTTTGCAAGCTATGGCACAA
CAAGCTCAGTTACGTGATGCTCTGAATGAAGCCCTGAAGCAGGAAGTGGAAAGACTTAAA
ATGGCCACAGGGGAAATGTCCTCTTCAGATGCATACAATTTGGGGATGCAGCACATTCCA
TATAACCAATCAGCGTTCTTTTCCCATCAGCCACAATCAGGGCCTAGCGAATCCCAGAAC
ATACAGATGCAGCAATTTCATTCCCTCCAGGATAGCTTGTTGAATCCTCATCGCCGTTTA
CTTGCAGGACATGGACAGGTTCTCCAAGACACAATGCAACAGGATCCCCTTGGTCGTTTT
CAAGGTCTCGATATTGGTGGCAGGGGTATGCATCTTGTCAAAACTGAAACACCTTCAATT
TCTGCCAGTGAGAGCAGCAGTACATTGTGA