Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400070937
CDS Infomation

pacid=37453544 polypeptide=PGSC0003DMP400047972 locus=PGSC0003DMG400027581 ID=PGSC0003DMT400070937.v4.03 annot-version=v4.03
Sequence

ATGAAACTACAAGATTTACGTGCAACTATCGTCTTTCTTCTATCCTTGCTAGCAATTCTT
CCTCACATTATTGCTAATCTTGATTCAGACAAACATGCTCTACTTCAATTTGCTGCATCT
GTCCCACATCTTAGAAAACTCAACTGGAACTCTGCTTTGTCAATCTGCAATTCTTGGATT
GGGATCACTTGCAACAAAGATGGAACGCGAGTAGTTGCAATTCATCTGCCTGGTGTTGGA
CTTACTGGCCATATCCCAGCAAACAGCATTGGCAAACTAGATGCTCTCCAAGTCCTTAGC
CTAAGAGCAAACAATCTAAATGGAAATCTTCCTTCTGATATTCTTTCAATCCCTTCTCTT
TACTCTATCTACCTTCAACATAATAACTTCTCTGGTGATATTCCTGTTTCCTTTTCATCA
ACACTTGGTGTAGTAGATCTCTCGTTTAACTCTTTTACCGGAGAAATTCCCCCCAAGATC
AAGAATTTGCCTCGACTATCCATGTTGAACCTAAAGTTCAATTCACTATCTGGATCAATT
CCCAATCTTGATGTGTCAAGGTTGAGTTTTCTGAATTTGAGTTACAACATGTTAAATGGC
TCAGTTCCATATTCCCTCAGGAAGTTCCCACTTTCTTCTTTTGTGGGGAACTCTAATTTA
TGTGGAACACCTTTGAGTAGCTGTTCTTCGAGATCTCCATCACGTAAAGGTGACAACTTT
AAGAAACTTAGTAATGAAATTATCATTGCAATTGCAGTAGGTGGTCCTTCTGTTATAATT
CTCCTTGTTTTATTCATCTACTTCTGTTATTTTAACAAGAAGGTTGATAACAACACAAGC
ATGGTTGAAGAGAAGAATGAGAAGTTAGAAGACTTTGGAAATGGGGTTCAAGATTCTGAA
AAGAACGAGTTAACTTTCTTTAAAGGGTGCTCTTATAACTTTGATCTTGAGGATCTGTTA
AGTGCTTCTGCTGATTTTCTTGGTAAAGGGAGTTATGGAACTGCTTACAGAGTTTCTTTG
GATGAGGTATCGATGATAGTTGTGAAAAGGCTGAAGGAAGTAAGGGTTGTTAAAAAGGAG
TTTGAACAGCATATGGATATTGTTGGAAAGATTACAAGGCACCCAAATATAGTGCCATTT
CTTGCTTGTTATTACTCAAAGGATGAGAAACTTCTTGTTTGTGAATACATCCCTTATGGT
AGCTTGTCATCCGCCTTATATGGTAATGGAAGAACTCGACTAGACTGGGATACCAGATTG
AAGGTCTCTCTTGGAGCAGCAAAAGGAATAGCACATATCCATTCTGAAGGTGGAGTGAAA
TTTACTCATGGAAACATCAAAGCATCCAACATACTTCTTACAAGGGATCTAGATGGTTGC
ATTTCTGATTTTGGCTTAAGCCCTTTAATGAATTACACAGCCATCAAGAATAAGGCTGCT
GGTTACCATGCTCCAGAAGTGATTGAAACGCGAAAAGGCACACAAAAATCAGATGTTTAT
AGCTTTGGAGTGTTGGTACTTGAGTTGCTCACTGGCAAATCTCCTCTGCCATTGCCAAGG
CACGAGGACGTAGTCAATTTGCCTAGATGGGTACGAGCTGTTGTTAAAGAGGAATGGACA
GCTGAAGTTTTTGATGCAGAGCTGATGAAGTACCATAATATTCAAGAAGAGATGGTGCAT
ATGCTTCAAATTGCACTTTTATGTGTAGCAAAGGTGCCTGACATGAGGCCTTCAATGGAT
GAAGTGATTAAAATGATTGAGCAAATTAAACATCTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400047972
PEP Infomation

pacid=37453544 transcript=PGSC0003DMT400070937 locus=PGSC0003DMG400027581 ID=PGSC0003DMT400070937.v4.03 annot-version=v4.03
Sequence

MKLQDLRATIVFLLSLLAILPHIIANLDSDKHALLQFAASVPHLRKLNWNSALSICNSWI
GITCNKDGTRVVAIHLPGVGLTGHIPANSIGKLDALQVLSLRANNLNGNLPSDILSIPSL
YSIYLQHNNFSGDIPVSFSSTLGVVDLSFNSFTGEIPPKIKNLPRLSMLNLKFNSLSGSI
PNLDVSRLSFLNLSYNMLNGSVPYSLRKFPLSSFVGNSNLCGTPLSSCSSRSPSRKGDNF
KKLSNEIIIAIAVGGPSVIILLVLFIYFCYFNKKVDNNTSMVEEKNEKLEDFGNGVQDSE
KNELTFFKGCSYNFDLEDLLSASADFLGKGSYGTAYRVSLDEVSMIVVKRLKEVRVVKKE
FEQHMDIVGKITRHPNIVPFLACYYSKDEKLLVCEYIPYGSLSSALYGNGRTRLDWDTRL
KVSLGAAKGIAHIHSEGGVKFTHGNIKASNILLTRDLDGCISDFGLSPLMNYTAIKNKAA
GYHAPEVIETRKGTQKSDVYSFGVLVLELLTGKSPLPLPRHEDVVNLPRWVRAVVKEEWT
AEVFDAELMKYHNIQEEMVHMLQIALLCVAKVPDMRPSMDEVIKMIEQIKHL*

Transcript Sequence

Transcript ID

PGSC0003DMT400070937
Transcript Infomation

pacid=37453544 locus=PGSC0003DMG400027581 ID=PGSC0003DMT400070937.v4.03 annot-version=v4.03
Sequence

ATGAAACTACAAGATTTACGTGCAACTATCGTCTTTCTTCTATCCTTGCTAGCAATTCTT
CCTCACATTATTGCTAATCTTGATTCAGACAAACATGCTCTACTTCAATTTGCTGCATCT
GTCCCACATCTTAGAAAACTCAACTGGAACTCTGCTTTGTCAATCTGCAATTCTTGGATT
GGGATCACTTGCAACAAAGATGGAACGCGAGTAGTTGCAATTCATCTGCCTGGTGTTGGA
CTTACTGGCCATATCCCAGCAAACAGCATTGGCAAACTAGATGCTCTCCAAGTCCTTAGC
CTAAGAGCAAACAATCTAAATGGAAATCTTCCTTCTGATATTCTTTCAATCCCTTCTCTT
TACTCTATCTACCTTCAACATAATAACTTCTCTGGTGATATTCCTGTTTCCTTTTCATCA
ACACTTGGTGTAGTAGATCTCTCGTTTAACTCTTTTACCGGAGAAATTCCCCCCAAGATC
AAGAATTTGCCTCGACTATCCATGTTGAACCTAAAGTTCAATTCACTATCTGGATCAATT
CCCAATCTTGATGTGTCAAGGTTGAGTTTTCTGAATTTGAGTTACAACATGTTAAATGGC
TCAGTTCCATATTCCCTCAGGAAGTTCCCACTTTCTTCTTTTGTGGGGAACTCTAATTTA
TGTGGAACACCTTTGAGTAGCTGTTCTTCGAGATCTCCATCACGTAAAGGTGACAACTTT
AAGAAACTTAGTAATGAAATTATCATTGCAATTGCAGTAGGTGGTCCTTCTGTTATAATT
CTCCTTGTTTTATTCATCTACTTCTGTTATTTTAACAAGAAGGTTGATAACAACACAAGC
ATGGTTGAAGAGAAGAATGAGAAGTTAGAAGACTTTGGAAATGGGGTTCAAGATTCTGAA
AAGAACGAGTTAACTTTCTTTAAAGGGTGCTCTTATAACTTTGATCTTGAGGATCTGTTA
AGTGCTTCTGCTGATTTTCTTGGTAAAGGGAGTTATGGAACTGCTTACAGAGTTTCTTTG
GATGAGGTATCGATGATAGTTGTGAAAAGGCTGAAGGAAGTAAGGGTTGTTAAAAAGGAG
TTTGAACAGCATATGGATATTGTTGGAAAGATTACAAGGCACCCAAATATAGTGCCATTT
CTTGCTTGTTATTACTCAAAGGATGAGAAACTTCTTGTTTGTGAATACATCCCTTATGGT
AGCTTGTCATCCGCCTTATATGGTAATGGAAGAACTCGACTAGACTGGGATACCAGATTG
AAGGTCTCTCTTGGAGCAGCAAAAGGAATAGCACATATCCATTCTGAAGGTGGAGTGAAA
TTTACTCATGGAAACATCAAAGCATCCAACATACTTCTTACAAGGGATCTAGATGGTTGC
ATTTCTGATTTTGGCTTAAGCCCTTTAATGAATTACACAGCCATCAAGAATAAGGCTGCT
GGTTACCATGCTCCAGAAGTGATTGAAACGCGAAAAGGCACACAAAAATCAGATGTTTAT
AGCTTTGGAGTGTTGGTACTTGAGTTGCTCACTGGCAAATCTCCTCTGCCATTGCCAAGG
CACGAGGACGTAGTCAATTTGCCTAGATGGGTACGAGCTGTTGTTAAAGAGGAATGGACA
GCTGAAGTTTTTGATGCAGAGCTGATGAAGTACCATAATATTCAAGAAGAGATGGTGCAT
ATGCTTCAAATTGCACTTTTATGTGTAGCAAAGGTGCCTGACATGAGGCCTTCAATGGAT
GAAGTGATTAAAATGATTGAGCAAATTAAACATCTATAA